Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2417 ATGCAAATGTTGAAGAGAGAGCAATGTGACCACACTAAACATGATTCTAGCTTCTCTCATTGGAAGGTTCTTATTGATCCTTCTGATTGGGGAAACCATGGATATACAAGATACAAGAAAGAAAACCTGCCACAAAATTTCAGTGTGGGAGTGTATGAGCTTGGTGTAGGTTCGTCGACTAGTGATTTAGGGTGTGAAATTTACAAGCTTGCGACCGACCCTCATGGCGTAGTAGTGGTTTATATTGGAAAATCTGTTGATGTGAGAAAAATACTCCAAAGTTATAGCAAAGATGGAGGTCATTTGGGTGATGGTTGTGCATCAGGCTCATTGTTGAGAAACTGA 345 0.4058 MQMLKREQCDHTKHDSSFSHWKVLIDPSDWGNHGYTRYKKENLPQNFSVGVYELGVGSSTSDLGCEIYKLATDPHGVVVVYIGKSVDVRKILQSYSKDGGHLGDGCASGSLLRN* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2417 114 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 2 111 - -
Mtr6g2417 114 Pfam GIY-YIG domain-containing protein 18 108 - -
Mtr6g2417 114 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 2 111 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2417 Mtr-Chr6 42434235 42436406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2417 3 106 HRT Transcription Factor Family AT5G56770 40.909 1.08e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2417 - - mtr:MTR_6g092500 243.047