Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2388 ATGGGTAGCCGAAAAAACAACAATCAAACAAACAACACAAACATGGACAACAACAACAACAACAACAACAACCACCTTCGATTTGAGGATGCTGATGAAGTAATTGAAGATGTTGCTGAAACATCTAACCTTGACCAATCAATGGGTGGTTGTGACCTTGATGATTCCAATGACAAAACTAGCGCTGATTACTACTTTGATTCTTACTCTCACTTTGGGATTCATGAAGAAATGTTGAAGGACACCGTAAGAACCAAGACATATCAAAACGTTATTTATCAGAATAGGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTCGGTGCTGGGACTGGAATTTTATCACTATTCTGTGCCAAAGCAGGGGCAGCACATGTCTATGCAGTCGAGTGCTCTCATATGGCTGACAGGGCAAAGGAAATAGTTGAAACTAATGGTTATTCTAAAGTTATAACAGTTTTGAAAGGGAAGATTGAAGAACTTGAACTTCCTGTTCCCAAAGTTGATATAATCATTTCCGAATGGATGGGATATTTCTTGTTGTTTGAGAACATGTTAAATTCTGTGCTCTTTGCACGCGACAAATGGCTTGTGGATGATGGAGTTATTCTCCCGGATATTGCATCACTCTATCTTACCGCCATTGAAGATAAAGATTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCTTGATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATTGCAACGAACTGTCAGCTACTCAAGTCCATGGACATCTCAAAAATGTCTTCAGGAGACTGTTCATTCACAGCACCTTTTAAGCTCGTTGCTGCTCGTGACGATTTTATTCATGCTTTTGTGGCATATTTTGATGTATCATTTACGAAGTGTCATAAATTGATGGGCTTCTCAACAGGGCCAAGATCGCGGAGTACACATTGGAAACAAACAGTCCTATATCTGGAAGATGTCTTGACTATTTGTGAGGGGGAGACAATTGTAGGGAGCATGACTGTGGCCCCAAATAAAAAGAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGCAGGCGATGCAATGCTTCGAGGGTTCAGTATTATAAGATGCGTTGA 1152 0.395 MGSRKNNNQTNNTNMDNNNNNNNNHLRFEDADEVIEDVAETSNLDQSMGGCDLDDSNDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNRFLFKNKVVLDVGAGTGILSLFCAKAGAAHVYAVECSHMADRAKEIVETNGYSKVITVLKGKIEELELPVPKVDIIISEWMGYFLLFENMLNSVLFARDKWLVDDGVILPDIASLYLTAIEDKDYKEDKIEFWNNVYGFDMSCIKKQALMEPLVDTVDQNQIATNCQLLKSMDISKMSSGDCSFTAPFKLVAARDDFIHAFVAYFDVSFTKCHKLMGFSTGPRSRSTHWKQTVLYLEDVLTICEGETIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCNASRVQYYKMR* 384
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2388 383 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 62 363 IPR025799 GO:0016274|GO:0018216
Mtr6g2388 383 MobiDBLite consensus disorder prediction 1 25 - -
Mtr6g2388 383 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 32 383 - -
Mtr6g2388 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 68 382 IPR029063 -
Mtr6g2388 383 Gene3D Vaccinia Virus protein VP39 53 205 IPR029063 -
Mtr6g2388 383 CDD AdoMet_MTases 104 204 - -
Mtr6g2388 383 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 32 383 IPR025799 GO:0016274|GO:0018216
Mtr6g2388 383 Pfam Methyltransferase domain 104 175 IPR041698 -
Mtr6g2388 383 Gene3D - 208 383 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr6g2388 Mtr-Chr6 42164284 42168549 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2388 3 345 C2H2 Transcription Factor Family AT3G12270 36.957 2.51e-65 216
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2388 6 42164284 42168549 Mtr6g2388 6 42164284 42168549 ECH