Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2358 ATGTCGTGGCAAACTTATGTGGATGAACATTTGATGTGTGATATCGATGGCACTGGTCATCACCTCACCGCGGCTGCCATTCTCGGCCATGACGGTTCTGTTTGGGCTCAGAGCACTTCATTCCCTCAGTTTAAGCCTGATGAGATTACTGGTATCATGAAAGATTTCGACGAACCAGGACATCTTGCACCTACTGGCATGCACCTTGGGGAAATCAAGTACATGGTTATTCAAGGAGAGCCTGGAGCTGTCATTCGTGGGAAGAAGGGATCTGGAGGTATAACAATAAAGAAAACTGGACAAGCTCTTGTTTTTGGCATCTATGAAGAACCTGTTACTCCTGGACAGTGCAACATGGTTGTTGAGAGGTTGGGAGATTACCTCGCTGAACAAGGTCTCTAG 402 0.4677 MSWQTYVDEHLMCDIDGTGHHLTAAAILGHDGSVWAQSTSFPQFKPDEITGIMKDFDEPGHLAPTGMHLGEIKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLAEQGL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2358 133 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Mtr6g2358 133 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Profilin signature 23 32 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Profilin signature 42 62 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Profilin signature 66 80 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Profilin signature 102 115 IPR005455 GO:0003779
Mtr6g2358 133 PRINTS Profilin signature 115 132 IPR005455 GO:0003779
Mtr6g2358 133 PANTHER PROFILIN 1 133 IPR005455 GO:0003779
Mtr6g2358 133 PANTHER PROFILIN 1 133 - -
Mtr6g2358 133 Pfam Profilin 1 132 IPR005455 GO:0003779
Mtr6g2358 133 Gene3D Dynein light chain 2a, cytoplasmic 1 133 - -
Mtr6g2358 133 SMART prof_2 1 133 IPR005455 GO:0003779
Mtr6g2358 133 CDD PROF 2 132 IPR005455 GO:0003779
Mtr6g2358 133 SUPERFAMILY Profilin (actin-binding protein) 2 132 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2358 Mtr-Chr6 41645601 41647565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2358 1 133 Cytoskeleton Gene Families AT4G29340 84.328 7.85e-82 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2358 K05759 - tcc:18588487 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2358 6 41645601 41647565 Mtr6g2358 6 41645601 41647565 ECH