Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2346 ATGGGGAACAAAATCGCACGAACGACGCAAGTATCAGCGTCGGAGTATTACCTACACGAGTTACCATCAACGTATAATCTAGTTCTGAAAGAAGTTCTTGGACGCGGTCGATTCTTCAAATCGATTCAGTGTAAGCATGATGAAGGTTTGGTTCTTGTTAAGGTTTATTTCAAACGCGGTGATTCTATTAATCTTTCGGAGTATGAACGGAGGATTTCGACGATTAAGGAGATTTTTAGTAGTATTGATCATCCTCATGTTTGGCCTTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCTTATCTTTTGAGGCAATATTTCTTCCATAATTTGCATGATCGACTAAGCACTCGACCTTTTCTTAGTTTCGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTAAAACAGAGCCACGAGAAGGGAGTTTGTCATGGTGATATCAAGTGTGAAAATGTGCTAATTACGTCCTCAAATTGGCTTTACCTTGCTGACTTTGCATCTTTCAAACCCACATACATACCGTATGACGATCCATCTGATTTCTCTTTTTTCTTTGACACGGGTGGAAGAAGACTCTGTTATCTGGCACCTGAGAGATTTTATGAAAATGGAGGGGAGATGCAGGTGGCACAAGATGCCCCTCTAAAGCCATCTATGGATTTATTTGCTGTTGGGTGTGTAATCGCTGAACTTTTCCTTGAGGGCCAACCACTATTTGAACTGTCTCAACTTCTTGCGTATCGCAGAGGGCAACATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGTAAGATGATTCAGCACATGATTCAGTTAGAACCAGAGTCTCGATTTTCGGCTGAAATGTATCTAAAGGAATACGCTGGAGTTGTATTCCCTACCTATTTTTCACCATTTCTGCATGATTTTTACCGTTGCTGGAGTCCTCTCCATTCTGATATGAGGGTTTTACTATGCCAGAGTGCTTTCCAGGAGATACTTAAACAAATGATGAACAAACAGTCATCCGATGATGCAGGTGTGACCTCTGGAGAACTTTTGGAAGAGATGGTTGCCAAAGAAAGCGCAAGTTTCATGGACTCACGAAGGAAAAGAGAGGACATAGGCAAAGGCTTAGTTCATGATCAGTATGAACTTCTTGGTGATATTAATAGCTTACTGAGGGATGCTAAAAATAATAATAAGAGTCCAGCTGGTCCTCAGCAAGGAATAGGAAATGCACAGAATTCAACCTTTCCTGAAAATCTAAAAAGTTTGCAGTCTCCTGGTGAGCTGCTTCAAACTATATCGAATGCATTTCGAGGAAATGATCATCCCTTTTTAAAAAGTATTACTATGAAAGACTTAAATTCATTGATGTCCGAATATGATAGTCAGTCGGATACATTTGGAACACCCTTTCTACCATTACCAAAGGATACTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTAAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCGTGTGATTCCATATGTGATTGCAATGCTTTCTGATACAGCAGCAATTGTTCGTTGCGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCATAGTGCGGGAGTTTCCTCCTAGTGATGCAAAGATATTTCCTGAGTATATTTTTCCTATGCTTTCTATGCTTCCTGATGATCCTGAGGAAAGTGTGAGGATATGTTATGCCAGCAACATAGCTAAGCTTGCGCTCACTGCTTATGGATTCTTGATACACTCAATAAGCTTGAGTGAGGCAGGTGTCCTTGATGAACTGAGTTTGCCACAGAAGCCATTTACATCATCCACCCAGACCCCGGGGAGGATGATGATAAATAGTGATGTCCAGCTTCTGCAGCTGAGGAAATCAATTGCAGAGGTTGTTCAAGAACTTGTTATGGGTCCAAAGCAAACGCCAAATATTAGGAGAGCGCTTCTTCAGGACATTGGTAAACTTTGCTACTTTTTTGGTGTGAGACAGAGTAATGACACTCTCTTACCTATCCTTCCCGCCTTCTTAAATGATCGAGATGAGCAATTAAGGACGGTATTCTATGAGAAGATTGTTTATGTTTGCTTTTTTGTGGGACAAAGAAGTGTAGAGGAATATCTATTACCTTACATTGAGCAAGCTTTAAGTGACATGACAGAAGCTGTCATTGTTAGAGCCTTAGAATGTTTGGCTATTCTATGCAAAAATGGGTTCTTCCGGAAGAGGATATTGCTTCAAATGATAGAGCGCGCCTTTGCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCAGTTGTGTCTTTCATTGCTGCTAGTAGTGAGAGCCTGGGTGCAGTGGATTCATATGTTTTCCTTGCTCCTGTTATACGCCCTTTCCTTCGTAGACAACCTGTATCTCTTGCTTCAGAGAAAGCTCTTTTGTCATGTTTAAAACCTCCTGTCTCAAGACAGGTTTTCTATGAAGTCTTGGAGAACTCCAGAAGCTCGGACATGTTAGAAAGACAGAGAAAGATATGGTATAGTTCATCACAGTCTAAAATATGGGAAATGGATTTACTTAAAAAAGGAATTGATGAGTTGGACTCATTAAAGAGCTGGGCTGAAAAGCAACAGGGTTCTGAGGCTCAACAAATTGTTGGAACTGGCATCCAACAGCCAGGGCTATCTGATAATGACAAAGCTGAGTCTAAATTTAGAGATATGGGGGCCTTTATGCATAATGATAGCAACATGTTGGGACAACGTGATCCGCAGTTCTCGGAGAAGTTACAGTTTTCAGGATTTATGTCACCAACCTTTAGTGGTGCGAACAGTTTGACATATGACAAGCCATCAGAAGGCATACCTTTATACTCCTTCAGTGTGGACAGGAGAGGAATGGGAATACCTCCCGCAGCTTCTGATTCTCCATTACAAATGAATTCTCTGGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCACTTAGTAAGTCCTTTAATTTGGCCAATTCAGTTCCATCACCAAAGCTTTTTTCAGGTTCTTTTAGCATCAACAATGGTACTAAACAGTTCCACCGAGTGGTACATGAACCAGATCCTAAGGAAAATGAGACAGCCTTTCTCAATAGCACATTTCAAGACGTCGGACTATCTTCTAATAATAAAGGTACATCAATTTCACTAGAAGATGCTACTACCCAAGCTGATTTATCAGGATTTCAATCTTTTGCTCGGACATCCATCCCTGATTCTGGATGGAGGCCACGTGGGGTGTTGGTTGCACACCTCCAGGAGCATCGTTCAGCTGTCAGCGACATAGCTGTTTCTTCTGACAATAGCTTTTTTGTGAGTGCATCCGATGACTCGACAGTCAAGATTTGGGATTCCAAAAAGCTGGAAAAAGACATTTCGTTCAGGTCAAAGCTAACTTATCACCTGGAGGGAAGCCATGCGCTATGTGTAGCAATGCTTCCAGGTTCAGCACAAGTGATAGTTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAATGTTGTTGAGAAGTATTCTGGTATTGCTGATGTCACAAAGAAGGATACCAAAGAAGGTGCAATACTTGGCCTTTTAAATTGCCCCATGGATAATAACAGCATTATGTATAGCACCCAGAACTGTGGCATTCATCTATGGGATACGAGGTCAAATTCCAATTCTTGGACGTTAAAAGCTACTCCTGATGAGGGCTACGCCTTGTCCCTAGCATCAGGGCCTTGTTCCAACTGGTTTGTATCAGGGTCGTCCAGGGGTGTAATTACACTTTGGGATCTGAGATTTCTTGTACCTGTAAACTCTTGGAAGTATTCTCTTGCTTGTCCTATAGAAAAGATTTGTCTCTTCCTTCCTCCTCCAAATGCTTCTCTGTCTTCAACCACTAGGCCCCTTGTTTTTGTGGCCGCGGGTTGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGCTAGCTGCCACCAGGTACTGAGGACGGCCAATTATGACAGTGATGCAGAAATGTCCGATATGCCTTCGGCCTTGGCCAAACCTTCAAGTAAGCCAACTTCTCAGTCAGATCCAAGACGAAATGTTAATCGCAAGTACAGAGTTGATGAGCTAAATGAACCTCCTCCCCGTCTTCCTGGTATTCGCACATTACTTCCCTTACCAGGTGGTGATTTATTGACTGGGGGCACTGATTTAAAGATACGTCGATGGGATCATTACAGTCCTGACAAAAGCTACTGCATTTGTGGACCTAACCTAAAAGGAGTTGGAAATGACGACTTTTACGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAAAGACGGCCTCTTGCAACCAAGCTGACACCAAAGGCAATTCTCGCAGCTGCTGCCACTGATTCCGCTGGTTGCCATCGTGATTCTATTGTGTCTGTGGCTTCAGTTAAGTTAAACCAGAGACTTCTACTCTCAAGTGGTAGAGATGGGGCCATCAAGGTTTGGAAGTAA 4611 0.4207 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSINLSEYERRISTIKEIFSSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYENGGEMQVAQDAPLKPSMDLFAVGCVIAELFLEGQPLFELSQLLAYRRGQHDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAEMYLKEYAGVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNKQSSDDAGVTSGELLEEMVAKESASFMDSRRKREDIGKGLVHDQYELLGDINSLLRDAKNNNKSPAGPQQGIGNAQNSTFPENLKSLQSPGELLQTISNAFRGNDHPFLKSITMKDLNSLMSEYDSQSDTFGTPFLPLPKDTMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDTAAIVRCAALETLCDILPIVREFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSLPQKPFTSSTQTPGRMMINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDTLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMTEAVIVRALECLAILCKNGFFRKRILLQMIERAFALLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKIWEMDLLKKGIDELDSLKSWAEKQQGSEAQQIVGTGIQQPGLSDNDKAESKFRDMGAFMHNDSNMLGQRDPQFSEKLQFSGFMSPTFSGANSLTYDKPSEGIPLYSFSVDRRGMGIPPAASDSPLQMNSLGVSSSAMPWVNPLSKSFNLANSVPSPKLFSGSFSINNGTKQFHRVVHEPDPKENETAFLNSTFQDVGLSSNNKGTSISLEDATTQADLSGFQSFARTSIPDSGWRPRGVLVAHLQEHRSAVSDIAVSSDNSFFVSASDDSTVKIWDSKKLEKDISFRSKLTYHLEGSHALCVAMLPGSAQVIVGASDGFIHMFSVDHISRGLGNVVEKYSGIADVTKKDTKEGAILGLLNCPMDNNSIMYSTQNCGIHLWDTRSNSNSWTLKATPDEGYALSLASGPCSNWFVSGSSRGVITLWDLRFLVPVNSWKYSLACPIEKICLFLPPPNASLSSTTRPLVFVAAGCNEVSLWNAENASCHQVLRTANYDSDAEMSDMPSALAKPSSKPTSQSDPRRNVNRKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGGTDLKIRRWDHYSPDKSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLATKLTPKAILAAAATDSAGCHRDSIVSVASVKLNQRLLLSSGRDGAIKVWK* 1537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2346 1536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1503 1536 - -
Mtr6g2346 1536 SUPERFAMILY WD40 repeat-like 1110 1536 IPR036322 GO:0005515
Mtr6g2346 1536 SUPERFAMILY ARM repeat 424 824 IPR016024 -
Mtr6g2346 1536 CDD STKc_Vps15 16 303 - -
Mtr6g2346 1536 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2346 1536 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1536 IPR045162 GO:0004674|GO:0016236|GO:0045324
Mtr6g2346 1536 MobiDBLite consensus disorder prediction 1375 1420 - -
Mtr6g2346 1536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1120 1152 - -
Mtr6g2346 1536 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2346 1536 ProSiteProfiles HEAT repeat profile. 697 735 IPR021133 -
Mtr6g2346 1536 SUPERFAMILY Protein kinase-like (PK-like) 26 321 IPR011009 -
Mtr6g2346 1536 ProSiteProfiles Trp-Asp (WD) repeats profile. 1120 1152 IPR001680 GO:0005515
Mtr6g2346 1536 SMART WD40_4 1408 1442 IPR001680 GO:0005515
Mtr6g2346 1536 SMART WD40_4 1260 1301 IPR001680 GO:0005515
Mtr6g2346 1536 SMART WD40_4 1488 1536 IPR001680 GO:0005515
Mtr6g2346 1536 SMART WD40_4 1163 1200 IPR001680 GO:0005515
Mtr6g2346 1536 SMART WD40_4 1113 1152 IPR001680 GO:0005515
Mtr6g2346 1536 MobiDBLite consensus disorder prediction 397 423 - -
Mtr6g2346 1536 Gene3D Transferase(Phosphotransferase) domain 1 21 369 - -
Mtr6g2346 1536 ProSiteProfiles Trp-Asp (WD) repeats profile. 1503 1536 IPR001680 GO:0005515
Mtr6g2346 1536 Gene3D - 1041 1222 IPR015943 GO:0005515
Mtr6g2346 1536 ProSiteProfiles HEAT repeat profile. 530 562 IPR021133 -
Mtr6g2346 1536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mtr6g2346 1536 Gene3D - 619 841 IPR011989 -
Mtr6g2346 1536 Pfam WD domain, G-beta repeat 1116 1152 IPR001680 GO:0005515
Mtr6g2346 1536 SMART serkin_6 27 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2346 1536 MobiDBLite consensus disorder prediction 1395 1409 - -
Mtr6g2346 1536 Gene3D - 469 616 IPR011989 -
Mtr6g2346 1536 Pfam HEAT repeat 530 559 IPR000357 GO:0005515
Mtr6g2346 1536 Gene3D - 1223 1536 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2346 Mtr-Chr6 41469862 41479668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2346 31 324 AGC Kinase Gene Family AT3G08730 23.708 1.32e-10 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Mtr6g2346 Pkinase 7.1e-22 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2346 6 41469862 41479668 Mtr6g2346 6 41469862 41479668 ECH