Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2341 ATGACAAAATCTACACCACCATGTATCAAAATGAAAATCTTCATTCTTGTCTCTTTTCTCATTTTCACCTATGCAAATTCTCAACAATCTCACTTATACAATCAAGAACATGAAATCCTATTAAAAATAAAAAACCATTTTCAAAATCCATCATTTCTTAGTCATTGGACAATATCCAACACTTCATTACATTGTTCATGGCCAGAAATCCATTGCACAAAGAATTCAGTCACTTCACTTTTAATGATGAACAAAGACATTACACAAACATTACCACCTTTCCTATGTGAACTCAAAAACCTCACTCACATTGATTTTCAATACAATTATATTCCAAATGAGTTTCCAACATCCTTGTACAATTGTTCCATGCTTGAATATCTTGACCTTTCACAGAACTTCTTTGTCGGTAACATACCGAATGATATCGATCGGTTGGCCAGTCTGCAGTTTCTTAGCCTTGGAGCAAACAACTTTTCAGGTGATATTCCAATGAGTATTGGTAAGTTGAAGAATTTAAAAAGTCTTCAAATTTATCAATGTCTTGTTAATGGTACTATTGCTGATGAAATTGGTGATTTGGTCAATCTTGAAACTTTGTTATTGTTCTCAAATCATATGTTACCTAGGACAAAGTTGCCATCTAGTTTTACTAAGTTGAAGAATTTAAGGAAATTTCATATGTATGACTCCAACTTGTTTGGTGAGATTCCTGAAACAATTGGTGAAATGATGTCTTTGGAGGATTTGGATTTGTCAGGAAATTTTTTGAGTGGAAAGATTCCAAATGGTTTGTTTAGTTTGAAAAATTTGAGCATAGTTTATCTTTACCAGAATAATCTTTCTGGAGAGATACCTGATGTGGTTGAAGCGTTTGAGTTAACAAGCGTGGATCTTTCGATGAATAATCTTACTGGTAAAATACCAGATGATTTTGGAAAACTCGAAAAGCTAAACGTCTTGAGTTTGTTTGAGAATCAATTATCTGGAGAGGTACCGGAACGCATCGGTCATTTTTCGGCTCTGACTGATTTTATTGTTTTTCAGAACAATTTATCAGGTAATCTTCCTCAAGATTTTGGTAGGTACTCTAAACTCGAAACTTTTCAGATTTCATCTAATAGTTTCAATGGAAGGTTACCAGAAAATTTGTGCTATCATGGAAGGTTAGTTGGTTTAATGGTTTTTGACAATAATCTGAGTGGTGAGTTGCCAAAATCTTTAGGTAGTTGTAGCAGTTTACAGTATCTGAGAGTTGAGAACAATGAGTTTTCTGGTAACATTCCTAATGGTTTATGGACATCTACGAATTTGTCGCAACTTATGTTAAGTGAGAACAAATTCACCGGTGAGCTTCCCGAAAGATTGTCTCAGAATCTTTCAACACTAGCCATAAGTTATAATCGGTTTTCTGGTAGAATTCCAAATGGAGTTTCTTCTTGGAAGAATGTAGTGAAGTTCAATGCTAGTAACAACTTTTTCAATGGAAGTATTCCATTAGAGTTAACATCTCTTCCTCGGTTAGAAACTCTTCTACTCGATCAGAACCAGCTCACCGGTCAAATTCCATCGGATATAACATCATGGAAGTCTCTAGTAACATTAAACTTGAGCCACAATCAACTATCTGGAGAAATACCTGATGCAATTTGTCGGTTACGTTCACTTAGTATGTTAGACTTATCAGAAAACCAGATCTCAGGCCGAATTCCGCCTCAACTAGCACCTATGAGACTCACAAATCTCAATCTCTCTTCCAATTATTTGACTGGGAGGATTCCGAGTGACCTCGAAAGCCTTGTGTATGACAGAAGCTTTCTGGGAAATTCTGGTCTATGTGCTGATACATTAGTACTAAACCTTACCTTGTGCAATTCTGGAACTAGAAGCAGAAGAAGTGATTCATCTATGTCTAAGGCTATGATCATAATCCTTGTTATAGTAGCTTCTTTAACGGTTTTCTTGGCGGTGTTCTTGTCGATCAGCTTTTACAAAAAAAGAAAGCAATTAATGAGAAGGACATGGAAGCTAACTTCCTTTCAGAGGCTGAGTTTTACAAAATCAAACATTGTGACGTCGTTGTCAGACAATAATATCATTGGAAGCGGTGGATTTGGTTCCGTGTACCGTGTTGCTGTTGAAGATTTAGGCTATGTTGCAGTGAAGAAGATTAGGGGAAGTAGCAAAAAGTTAGACCAGAAGCTTGTGGATTCATTTCTTGCAGAAGTTGAAATACTGAGCAATATTCGGCATAGCAACATTGTGAAGTTGATGTGTTGTATCTCAAGTGATGATTCTCTACTACTTGTATACGAGTATCATGAAAATCAAAGCCTTGATAGGTGGCTGCACAAGAAAAGTAAGATACCGGTTGTGTCAGGGACGGTCCATCATAACATCCTTGATTGGCCAAAGAGACTGCATATAGCCATTGGAGCTGCACAAGGTTTGTGCTACATGCATAATGACTGCTCACCGCCTATTGTTCATCGAGATGTGAAGACAAGTAACATTCTTTTGGATTCTAAATTCAATGCAAAAGTTGCTGATTTCGGTCTTGCCAGAATATTGATCAAGCCAGAAGAACTTGCTACCATGTCAGCTGTTGCTGGAACATTCGGCTATATTGCTCCAGAATATGCTCAAACAATACGAGTCAACGAGAAGATAGATGTCTACAGCTTTGGTGTAGTCCTATTGGAACTGACAACTGGAAAAGAAGCAAATCATGGAGACGAATTCTCGTCTCTTGCAGAATGGGCGTGGCGCCACATTCAGATAGGAACCGATATAGAAGAACTTCTAGACGATGATGCTATGGAACCTAGTAACGTGGAAGAAATGTGCAGCATCTTCAAACTTGGAGTTATGTGCACTTCAACACTGCCAGCTAGTAGACCATCAATGAAGGAAGTCGTGAAGATATTGAGAAACTGCAAGGATCCACTCGCCAATGTGGAGAAGATTGTTGATATCTATGATGCTGCTCCACTTCTTAAGAATTTGAAATGGGAAAAGCAGGTTGAATACTCAGTATGA 3039 0.3745 MTKSTPPCIKMKIFILVSFLIFTYANSQQSHLYNQEHEILLKIKNHFQNPSFLSHWTISNTSLHCSWPEIHCTKNSVTSLLMMNKDITQTLPPFLCELKNLTHIDFQYNYIPNEFPTSLYNCSMLEYLDLSQNFFVGNIPNDIDRLASLQFLSLGANNFSGDIPMSIGKLKNLKSLQIYQCLVNGTIADEIGDLVNLETLLLFSNHMLPRTKLPSSFTKLKNLRKFHMYDSNLFGEIPETIGEMMSLEDLDLSGNFLSGKIPNGLFSLKNLSIVYLYQNNLSGEIPDVVEAFELTSVDLSMNNLTGKIPDDFGKLEKLNVLSLFENQLSGEVPERIGHFSALTDFIVFQNNLSGNLPQDFGRYSKLETFQISSNSFNGRLPENLCYHGRLVGLMVFDNNLSGELPKSLGSCSSLQYLRVENNEFSGNIPNGLWTSTNLSQLMLSENKFTGELPERLSQNLSTLAISYNRFSGRIPNGVSSWKNVVKFNASNNFFNGSIPLELTSLPRLETLLLDQNQLTGQIPSDITSWKSLVTLNLSHNQLSGEIPDAICRLRSLSMLDLSENQISGRIPPQLAPMRLTNLNLSSNYLTGRIPSDLESLVYDRSFLGNSGLCADTLVLNLTLCNSGTRSRRSDSSMSKAMIIILVIVASLTVFLAVFLSISFYKKRKQLMRRTWKLTSFQRLSFTKSNIVTSLSDNNIIGSGGFGSVYRVAVEDLGYVAVKKIRGSSKKLDQKLVDSFLAEVEILSNIRHSNIVKLMCCISSDDSLLLVYEYHENQSLDRWLHKKSKIPVVSGTVHHNILDWPKRLHIAIGAAQGLCYMHNDCSPPIVHRDVKTSNILLDSKFNAKVADFGLARILIKPEELATMSAVAGTFGYIAPEYAQTIRVNEKIDVYSFGVVLLELTTGKEANHGDEFSSLAEWAWRHIQIGTDIEELLDDDAMEPSNVEEMCSIFKLGVMCTSTLPASRPSMKEVVKILRNCKDPLANVEKIVDIYDAAPLLKNLKWEKQVEYSV* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2341 1012 Gene3D Ribonuclease Inhibitor 292 341 IPR032675 -
Mtr6g2341 1012 ProSiteProfiles Protein kinase domain profile. 694 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2341 1012 SUPERFAMILY Protein kinase-like (PK-like) 687 976 IPR011009 -
Mtr6g2341 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1004 - -
Mtr6g2341 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1004 - -
Mtr6g2341 1012 SMART serkin_6 694 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2341 1012 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Mtr6g2341 1012 Pfam Leucine rich repeat 506 566 IPR001611 GO:0005515
Mtr6g2341 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Mtr6g2341 1012 CDD STKc_IRAK 700 976 - -
Mtr6g2341 1012 Pfam Leucine Rich Repeat 246 266 IPR001611 GO:0005515
Mtr6g2341 1012 Pfam Leucine Rich Repeat 578 600 IPR001611 GO:0005515
Mtr6g2341 1012 Pfam Leucine Rich Repeat 125 145 IPR001611 GO:0005515
Mtr6g2341 1012 SMART LRR_typ_2 553 576 IPR003591 -
Mtr6g2341 1012 SMART LRR_typ_2 98 122 IPR003591 -
Mtr6g2341 1012 SMART LRR_typ_2 505 529 IPR003591 -
Mtr6g2341 1012 SMART LRR_typ_2 244 268 IPR003591 -
Mtr6g2341 1012 SMART LRR_typ_2 315 339 IPR003591 -
Mtr6g2341 1012 SMART LRR_typ_2 194 219 IPR003591 -
Mtr6g2341 1012 SMART LRR_typ_2 436 459 IPR003591 -
Mtr6g2341 1012 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Mtr6g2341 1012 SUPERFAMILY RNI-like 293 600 - -
Mtr6g2341 1012 Pfam Protein kinase domain 696 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2341 1012 Gene3D Phosphorylase Kinase; domain 1 676 773 - -
Mtr6g2341 1012 SUPERFAMILY L domain-like 39 376 - -
Mtr6g2341 1012 Gene3D Ribonuclease Inhibitor 33 210 IPR032675 -
Mtr6g2341 1012 Gene3D Transferase(Phosphotransferase) domain 1 775 994 - -
Mtr6g2341 1012 Gene3D Ribonuclease Inhibitor 342 621 IPR032675 -
Mtr6g2341 1012 Gene3D Ribonuclease Inhibitor 211 291 IPR032675 -
Mtr6g2341 1012 ProSiteProfiles Leucine-rich repeat profile. 531 553 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2341 Mtr-Chr6 41394865 41398563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2341 36 1009 Receptor kinase-like Gene Family AT5G25930 51.935 0.0 978
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr6g2341 Pkinase 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2341 - - gmx:100785907 1448.72