Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2340 ATGAAAATATCAACATTTTCATTTCACCATCTTCTTACATTTTTCCTCATAATTCTAAACCATGCAAAATCTCAATCTCAACAAAATCTTCATAACCAAGAACATGAAACCCTAATGAAAATAAAACAACATTTTCAAAATCCACCAAACCTTAATCATTGGACTTCATCAAACACCTCTTATTGTTCTTCTTGGCCAGAAATCACTTGCACAAATGGTTCTGTCACAGGTTTGACTTTGTTCAACTATAACATAAACCAAACCATACCATCTTTCATATGTGACCTTAAAAATCTCACACATGTTGATTTCAACAACAATTACATACCTGGGATGTTTCCAACAGATTTATACAATTGTTCAAAGTTAGAGTATCTTGATTTGTCAATGAACAATTTTGTTGGAAAAATTCCTGAAAATATTTTCACTTTGTCAAATTTGAATTATCTTAATCTTAGTTATACTAACTTCACTGATGATATTCCTTCAAGTATTGGAAAGTTAAAGAAACTGAGATTTCTTGCATTGCAAGTTTGTCTGTTTAATGGAACATTCCCGGATGAGATTGGAGATTTGGTGAATCTTGAAACGTTGGATTTGTCGAACAATTTGTTTAAGAGTTCTACGTTGCCGGTGAGCTGGACCAAGTTGAGTAAATTGAAGGTGTTTTATATGTATGTCTGCAATCTTTTTGGTGAAATGCCTGAATCAATGGGAGAAATGGTTTCTTTGGAGGATTTGGATATTTCCCAAAATGGGTTGACTGGGAAAATTCCTAGTGGTTTGTTCATGTTGAAGAATCTTAGAAGATTGTTGCTTGCAACGAACGATCTTTCTGGAGAGTTACCTGATGTGGTTGAAGCGTTAAACTTGACTAACATCGAGCTTACGCAGAATAATCTTACTGGAAAAATACCAGATGATTTTGGAAAGCTACAAAAGCTAACAGAGTTGTCTTTGTCGTTGAATAATTTTTCAGGAGAGATTCCGCAAAGCATAGGTCAACTTCCATCTCTGATAGATTTTAAGGTCTTTATGAATAACTTATCAGGTACACTTCCTCCTGATTTTGGACTTCACTCAAAGCTAAGAAGTTTTCATGTTACAACAAACAGATTTGAGGGAAGATTGCCAGAGAATTTGTGCTATCATGGAGAGTTACAAAATTTAACTGCCTATGAAAATCATCTAAGTGGTGAGTTACCAGAATCACTTGGAAATTGTAGTAGCTTGTTGGAGATGAAAATTTACAAGAACGATTTTTACGGTAACATTCCTAGTGGACTCTGGAGATCTGAAAATCTGGGGTATTTTATGATAAGTCATAATAAGTTCAATGGTGAGCTTCCTCAAAATTTGTCATCAAGTATTTCACTTTTGGATATAAGTTATAATCAATTTTCTGGTGGAATTCCAATTGGAGTATCTTCTTGGACTAATGTGGTTGAGTTCATAGCAAGCAAGAATAATCTTAATGGAAGTATTCCACAAGAGATAACATCACTTCATAAGCTACAAACACTGTCGCTTGATCAGAATCAGCTAAAAGGGCCACTTCCATTTGATGTAATATCATGGAATTCATTACTGACACTAAATTTGAGCCAAAATCAACTAAGTGGAGAAATTCCAGCTTCAATCGGTTATTTACCTGATCTTAGTGTTCTTGATCTCTCAGACAATCAATTCTCCGGCGAAATACCTTCTATAGCTCCAAGAATCACAGTTCTCGATCTATCATCCAATCGTTTAACAGGAAGAGTTCCTAGTGCATTTGAAAATTCGGCATATGATAGAAGCTTTTTGAACAATTCTGGTTTATGTGCTGATACACCAAAATTGAACCTTACCTTGTGCAATTCTAATTCCAACACTCAAAGTGAAAGCAAAGATTCATCTTTATCTCCTGCTTTGATTGGAATTTTGGTGGTAGTTTCGATCTTAGTGGCTTCATTGATATCGTTTGTGATTATCAAACTTTACAGTAAAAGAAAACAAGGATCGGATAACTCATCATGGAAACTCACTTCATTTCAAAGACTAAATTTCACAGAATCAGACATAGTTTCTTCAATGACAGAAAATAATATTATAGGAAGTGGTGGATATGGTACAGTTTATAGAGTTTCTGTCGATGTATTAGGCTATGTAGCTGTGAAAAAGATTTGGGAAAACAAAAAACTAGACCAAAATCTTGAGAAATCATTTCACACTGAGGTTAAAATATTGAGCAGCATTCGACATAGAAACATTGTGAAATTGTTATGTTGTATCTCTAATGATGATACAATGCTACTTGTTTACGAGTATGTCGAAAACCGAAGTCTTGATGGATGGCTGCAGAAGAAGAAAACTGTTAAGTCTTCAACTTTGTTGTCGAGGTCAGTTCATCATGTTGTTCTTGACTGGCCAAAGAGATTGCAAATAGCTGTCGGTGTAGCTCAAGGTTTGAGCTATATGCATCATGAATGTTCACCGCCGGTTGTTCATAGAGATGTGAAGACAAGTAACATTCTTTTGGATGCTCAGTTTAATGCAAAAGTTGCTGATTTTGGTTTGGCTAGGATGTTGATCAGTCCCGGGGAAGTTGCTACTATGTCAGCTGTGATCGGTTCTTTCGGCTATATGGCTCCAGAATATATTCAAACAACTAAAGTTAGTGAAAAGATTGATGTATACAGCTTTGGTGTAATCCTATTGGAACTGACAACCGGTAAAGAAGCTAATTATGGCGACGAGCATTCATCTCTCGCAGAGTGGTCTTGGCGCCATATTCAAGCCGGAAGCAATATAGAAGAGTTGCTTGACAAAGAAGTAATGGAACCAAGTCACTTGAATGGAATGTGCAAAGTTTTCAAACTTGGTGTGATGTGTACTTCAACACTTCCATCTAGTAGACCTTCCATGAAGGAGGTGTTAGAAGTATTGCTCAATTGTGGAGAATTGTTTGGTTATGCAGAAAGGAATATTGGACTTATTAATGATGGTGTTCCACTTCTTAGAAATTCAAAAAGAGAGAGTAAGTTGGATATTGATGATGATAGCTAG 3048 0.3563 MKISTFSFHHLLTFFLIILNHAKSQSQQNLHNQEHETLMKIKQHFQNPPNLNHWTSSNTSYCSSWPEITCTNGSVTGLTLFNYNINQTIPSFICDLKNLTHVDFNNNYIPGMFPTDLYNCSKLEYLDLSMNNFVGKIPENIFTLSNLNYLNLSYTNFTDDIPSSIGKLKKLRFLALQVCLFNGTFPDEIGDLVNLETLDLSNNLFKSSTLPVSWTKLSKLKVFYMYVCNLFGEMPESMGEMVSLEDLDISQNGLTGKIPSGLFMLKNLRRLLLATNDLSGELPDVVEALNLTNIELTQNNLTGKIPDDFGKLQKLTELSLSLNNFSGEIPQSIGQLPSLIDFKVFMNNLSGTLPPDFGLHSKLRSFHVTTNRFEGRLPENLCYHGELQNLTAYENHLSGELPESLGNCSSLLEMKIYKNDFYGNIPSGLWRSENLGYFMISHNKFNGELPQNLSSSISLLDISYNQFSGGIPIGVSSWTNVVEFIASKNNLNGSIPQEITSLHKLQTLSLDQNQLKGPLPFDVISWNSLLTLNLSQNQLSGEIPASIGYLPDLSVLDLSDNQFSGEIPSIAPRITVLDLSSNRLTGRVPSAFENSAYDRSFLNNSGLCADTPKLNLTLCNSNSNTQSESKDSSLSPALIGILVVVSILVASLISFVIIKLYSKRKQGSDNSSWKLTSFQRLNFTESDIVSSMTENNIIGSGGYGTVYRVSVDVLGYVAVKKIWENKKLDQNLEKSFHTEVKILSSIRHRNIVKLLCCISNDDTMLLVYEYVENRSLDGWLQKKKTVKSSTLLSRSVHHVVLDWPKRLQIAVGVAQGLSYMHHECSPPVVHRDVKTSNILLDAQFNAKVADFGLARMLISPGEVATMSAVIGSFGYMAPEYIQTTKVSEKIDVYSFGVILLELTTGKEANYGDEHSSLAEWSWRHIQAGSNIEELLDKEVMEPSHLNGMCKVFKLGVMCTSTLPSSRPSMKEVLEVLLNCGELFGYAERNIGLINDGVPLLRNSKRESKLDIDDDS* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2340 1015 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Mtr6g2340 1015 Gene3D Ribonuclease Inhibitor 184 287 IPR032675 -
Mtr6g2340 1015 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 1008 - -
Mtr6g2340 1015 SUPERFAMILY RNI-like 43 350 - -
Mtr6g2340 1015 ProSiteProfiles Protein kinase domain profile. 692 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2340 1015 SUPERFAMILY L domain-like 262 594 - -
Mtr6g2340 1015 CDD STKc_IRAK 698 976 - -
Mtr6g2340 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Mtr6g2340 1015 SUPERFAMILY Protein kinase-like (PK-like) 681 976 IPR011009 -
Mtr6g2340 1015 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 1008 - -
Mtr6g2340 1015 Pfam Protein kinase domain 694 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2340 1015 Gene3D Ribonuclease Inhibitor 382 475 IPR032675 -
Mtr6g2340 1015 Gene3D Ribonuclease Inhibitor 476 616 IPR032675 -
Mtr6g2340 1015 Gene3D Ribonuclease Inhibitor 288 381 IPR032675 -
Mtr6g2340 1015 SMART serkin_6 692 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2340 1015 Gene3D Transferase(Phosphotransferase) domain 1 771 983 - -
Mtr6g2340 1015 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Mtr6g2340 1015 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mtr6g2340 1015 SMART LRR_typ_2 144 168 IPR003591 -
Mtr6g2340 1015 SMART LRR_typ_2 96 120 IPR003591 -
Mtr6g2340 1015 SMART LRR_typ_2 312 336 IPR003591 -
Mtr6g2340 1015 SMART LRR_typ_2 550 574 IPR003591 -
Mtr6g2340 1015 SMART LRR_typ_2 241 265 IPR003591 -
Mtr6g2340 1015 SMART LRR_typ_2 192 217 IPR003591 -
Mtr6g2340 1015 SMART LRR_typ_2 502 526 IPR003591 -
Mtr6g2340 1015 Gene3D Phosphorylase Kinase; domain 1 663 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2340 Mtr-Chr6 41387742 41392648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2340 34 980 Receptor kinase-like Gene Family AT5G25930 50.419 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr6g2340 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2340 - - cam:101515509 1581.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2340 6 41387742 41392648 Mtr6g2340 6 41387742 41392648 ECH