Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2313 ATGGGATGCATTTATTCAAGAGTATGCATAGGTGAAACATGTAAAGGTTCAAGCATCAATGGTGACCCAATTTCAAGACATGAGCTTCAACAAGCTTTTTCACCATCCTCTGATGGTGGTGAAATTCGAGACCAATTGAATCAGTTAAGCTTAACTAGAGATCCTGAAGCTGGAATAAGAAGACTAGCTAGGGTTTCGTCGCAGTTTCTTCCACCGGATGGTTCGAGGATTGCGAAGGTTGATTCGGAGAAGTATGAATTACGGTATTCGTATCTTTCTCAGCGCGGTTATTATCCTGATGCTCTTGATAAAGCGAATCAAGATAGTTTTTGTATTCACACGCCATTTGGAACGGATGTGAATGATCATTTTTTCGGTGTTTTTGATGGTCATGGTGAATTTGGGGCGGAGTGTTCACAGTTTGTGAAGCGTAGGCTTTGTGAGAATTTGTTAAGGAATTCTAAGTTTAATGTTGATCCTGTTGAGGCTTGTCATGCGTCTTTTTTAGCTACGAATTCACAGTTACATGCTGATGTTTTAGATGATAGTATGAGTGGAACAACAGCCATAACAATTTTGGTTAGAGGGAAGACGGTTTATGTAGCGAATTGTGGTGATTCGAGGGCGGTGATAGCGGAGAAGAAAGGGAAAGATGGTGATATTGTTGCAGTTGATTTGTCTATTGATCAGACACCTTATAGAGTTGATGAGTTAGAAAGAGTGAAACTTTGTGGTGCTAGGGTTCTAACTTTGGATCAAATTGAAGGGTTAAAGAATCCTGAAGTTCCGTGTTGGGGTAGTGATGAAGAAGGTGATGATGGCGATCCTCCTAGGTTGTGGGTCCCAAATGGGATGTACCCTGGTACTGCTTTTACAAGGAGTATTGGTGATTCTATTGCCGAGACTATTGGTGTTGTTGCGAATCCTGAGATTGTTAGTTTTGAACTCACACCTAACAATCCATTTTTTGTTATTGCTAGTGATGGTGTTTTTGAGTTTCTTTCTAGCCAAACTGTGGTTGATATGGTTGCAAAATTCAAAGATCCACGTGATGCTTGTGCTGCGATAGTGGCAGAATCTTATCGACTATGGCTACAGTATGAGACTCGTACAGATGATATTACAGTCATCATTGTGCATATAAATGGACTAAAAGAACCCAATGTTGCTCACTCGGAAAGTTATCGCGAAGTTTTACGAACCCCTGTCCCTCAAGTTGTAGAGGTGACAGGTTCAGAATCTCCTTCCACATTTGGATGGAATGCTAGGAATCATCGTGTAAGGCAAGAATTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTCGAGAATGGACAAGGTTGGGTTCCTCCATCTTCAGCCCACAGAAAGACATGGGAGGAAGAAGCACACATAGAACAGGCGTTGAATGACCATTTTCTCTTTCGAAAACTTACCGAATCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTAACGTCGAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAAGTGACTGTTTTTATGTCGTTGGCAGCGGAGAATTTGAAGTCTTGGCAACTCAGGAAGAAAAAGATGGGGAGGTACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTATCATGCTTTGGAGAACTTGCTCTGATGTACAACAAACCACTCCAAGCCTCTGTGCGTGCTGTAACAAACGGAACTCTTTGGACTTTAAAGCGAGAAGATTTTCGCGGGATTTTAGTGTCAGAATTCTCTAACTTATCATCATTGAAGTTACTTCGGTCCGTAGATCTCCTCTCCAGATTGTCAATTTTACAACTGAGTCAGATCTCTGACTCCCTTTCTGAAGTTACCTTCTCAAGTGGACAGACAATAATCAATAAAAATGAAGTCCTTGCATTGTACATCATCCAAAAGGGACGTGTAAAATTAACTTTCGATGCTGATTTATTGACAAGTCCAAATACCTACAGCCTCAAGGCCGACATCGAAAATGAGGACGATGATGTACAGAGCGGAACAGAACTGTCAATAGAGAAGCCTGAGGGAAGCTATTTCGGTGAATGGTCCCTTCTTGATCAACAAATTGGTTCCTTAACTGCTGTTGCTGAGGATGATGTTGTATGTGCTTTACTAACAAAGGACAAACTTGAATCAGTTATTGGCTCCTTGCAAAAGATTTCTCAGGAAGATCACAAGTTGAGGGATAATTCCGAGGAATTCACTAAAAGTTTTGAATTCTCATCGTTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACGATATATTCCACTGACTGCTCTGAGATTGGACTTGCAAATTTAAAAGACTCAGAAAATGTGCTTACTTTGAAGAAATTTTCCAAGCCGAAAGTGAAAAGGCTAGGAAAGGAATCACAAGTCTTGAAAGAGAAAGATTTGATTAAGAGTATGAGCTCTTCAGCTTGTGTACCACAAGTTTTATGCACCTTTGCCGACCGCATATATGCTGGAATACTGCTAAATACACGTCTTGCTTGCCCTTTGTCTTCCATACTATCAAGTCCTTTTAGCGAATCAGCGGCCCGATATTGTGCTGCTTCTGTTGTGATTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTGTATAGAGGTGTCTCGCATGATGTTTTGATGTTGGATCAAAGAGGACATATACAGCTGGTGGACTTCAGATTTGGAAAGAAGCTCTCTGATGAGAGAACATTCACAATTTGTGGGAGGGCAGATTCACTAGCTCCAGAGATTGTTCTCGGAAAAGGCCACAGTTTCCCTGCCGACTGGTGGGCATTGGGAGTTTTGGTATATTTTATGTTATGCGGCGAGATGCCATTTGGATCATGGAGAGAAAATGAACTCGATACAGTTGCCAAAATTGCAAAACGGAAACTAAATCTTCCTGAAACTTTTAGCCCTGACGCTGTTGATCTCATCTCCAAGTTACTTGACGTGGAAGAAAATACTAGACTTGGTAGCCAAGGTTCTGATTCTGTCAAGAGTCACTCATGGTTTAACGGTATCGACTGGGAAGCACTTAGACACCACGCTTTTCCTGTTCCTCCAGAAATTGTTTCTCGTATAACACAATACTTGGAAGTTCGTTATGAGGATTCTTCCGCTTCTGTTGAGTCTCCATTAGAAGAGGTAGAAGAACTTAATGTGCCTGAATGGCTTGAAGATTGGTAG 3219 0.416 MGCIYSRVCIGETCKGSSINGDPISRHELQQAFSPSSDGGEIRDQLNQLSLTRDPEAGIRRLARVSSQFLPPDGSRIAKVDSEKYELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTDVNDHFFGVFDGHGEFGAECSQFVKRRLCENLLRNSKFNVDPVEACHASFLATNSQLHADVLDDSMSGTTAITILVRGKTVYVANCGDSRAVIAEKKGKDGDIVAVDLSIDQTPYRVDELERVKLCGARVLTLDQIEGLKNPEVPCWGSDEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVSFELTPNNPFFVIASDGVFEFLSSQTVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLKEPNVAHSESYREVLRTPVPQVVEVTGSESPSTFGWNARNHRVRQELSRARLRAIENSLENGQGWVPPSSAHRKTWEEEAHIEQALNDHFLFRKLTESQCHVLLDCMQRVNVEPGDIIVKQGGESDCFYVVGSGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTNGTLWTLKREDFRGILVSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVTFSSGQTIINKNEVLALYIIQKGRVKLTFDADLLTSPNTYSLKADIENEDDDVQSGTELSIEKPEGSYFGEWSLLDQQIGSLTAVAEDDVVCALLTKDKLESVIGSLQKISQEDHKLRDNSEEFTKSFEFSSFDKVQLSDLEWRKTIYSTDCSEIGLANLKDSENVLTLKKFSKPKVKRLGKESQVLKEKDLIKSMSSSACVPQVLCTFADRIYAGILLNTRLACPLSSILSSPFSESAARYCAASVVIALEDLHKNGVLYRGVSHDVLMLDQRGHIQLVDFRFGKKLSDERTFTICGRADSLAPEIVLGKGHSFPADWWALGVLVYFMLCGEMPFGSWRENELDTVAKIAKRKLNLPETFSPDAVDLISKLLDVEENTRLGSQGSDSVKSHSWFNGIDWEALRHHAFPVPPEIVSRITQYLEVRYEDSSASVESPLEEVEELNVPEWLEDW* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2313 1072 CDD CAP_ED 601 725 IPR000595 -
Mtr6g2313 1072 SMART serkin_6 769 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2313 1072 Gene3D Phosphorylase Kinase; domain 1 759 845 - -
Mtr6g2313 1072 Gene3D Transferase(Phosphotransferase) domain 1 846 1032 - -
Mtr6g2313 1072 SUPERFAMILY cAMP-binding domain-like 442 583 IPR018490 -
Mtr6g2313 1072 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 34 1072 - -
Mtr6g2313 1072 ProSiteProfiles PPM-type phosphatase domain profile. 88 381 IPR001932 -
Mtr6g2313 1072 SUPERFAMILY cAMP-binding domain-like 592 735 IPR018490 -
Mtr6g2313 1072 SMART PP2C_4 80 379 IPR001932 -
Mtr6g2313 1072 CDD CAP_ED 475 583 IPR000595 -
Mtr6g2313 1072 CDD PP2Cc 104 381 IPR001932 -
Mtr6g2313 1072 SMART cnmp_10 601 739 IPR000595 -
Mtr6g2313 1072 SMART cnmp_10 475 599 IPR000595 -
Mtr6g2313 1072 Gene3D - 75 382 IPR036457 -
Mtr6g2313 1072 Pfam Protein kinase domain 779 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2313 1072 Pfam Cyclic nucleotide-binding domain 620 724 IPR000595 -
Mtr6g2313 1072 Pfam Cyclic nucleotide-binding domain 494 583 IPR000595 -
Mtr6g2313 1072 SUPERFAMILY Protein kinase-like (PK-like) 750 1043 IPR011009 -
Mtr6g2313 1072 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Mtr6g2313 1072 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 34 1072 - -
Mtr6g2313 1072 Pfam Protein phosphatase 2C 117 360 IPR001932 -
Mtr6g2313 1072 ProSiteProfiles cAMP/cGMP binding motif profile. 601 725 IPR000595 -
Mtr6g2313 1072 SUPERFAMILY PP2C-like 78 384 IPR036457 -
Mtr6g2313 1072 ProSiteProfiles cAMP/cGMP binding motif profile. 475 583 IPR000595 -
Mtr6g2313 1072 Gene3D Jelly Rolls 589 741 IPR014710 -
Mtr6g2313 1072 Gene3D Jelly Rolls 444 583 IPR014710 -
Mtr6g2313 1072 ProSiteProfiles Protein kinase domain profile. 761 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2313 Mtr-Chr6 40974268 40983250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2313 1 1072 PP2C-type Phosphatase Gene Family AT2G20050 66.546 0.0 1466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Mtr6g2313 Pkinase 9.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2313 - - gmx:100799821 1779.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2313 6 40974268 40983250 Mtr6g2313 6 40974268 40983250 ECH