Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2303 ATGGCCAACAGTAGCAACTCATCTTTAGCTCTTGTGACTTCTTCAAGAAGAAATTATTATGATGTGTTTGTCACCTTCAGAGGTGAAGACACTCGCAACAATTTCACTGATTATCTTTTTGATGCACTTGAAACCAAAGGTATTTATGCATTTAGGGATGACACAAATCTTAAAAAAGGTGAAGTCATAGGACCTGAGCTCCTTCGTGCAATCGAAGGATCTCAGGTTTTCGTCGCAGTCTTTTCAAGGAACTATGCTTCCTCAACATGGTGCCTGCAAGAATTAGAAAAGATCTGTGAATGTGTTCAGGGACCTGAAAAACACGTTCTTCCTGTTTTTTATGATATTGATCCTTCTGAGGTGCGGAAGCAAAGTGGGATTTATTGTGAATCTTTTGTCAAACATGAACAAAGATTCCAACAAGACCCTCATAAGGTGTCAAGATGGAGGGAAGCTTTAAACCAAGTGGGGAGTATCTCTGGTTGGGATCTACGTGATAAGCCACAAGCTGGAGAGATTAAAAAGATTGTTCAAAATATAATGAATATATTGGATTGTAAATCTTCATTCATTTCAAAAGATTTAGTTGGGATAAATTCTCGGATAGAAGTATTACAAAATCATTTACTTTTGGACTCGGTTGATGGTGTTTGTGCTATTGGAATTTGTGGAATGGGCGGAATAGGAAAGACAACCCTTGCTATGACTTTATATGGCCAGATATCTCATCAATTTAGTGCATCTTGTTTTATAGACGATGTAAGCAAAATTTATAGATTATATGATGGTCCCCTCGATGCACAAAGGCAAATCCTACTTCAAACTGTCGGCATAGAACACCATCAAATATGCAATCGTTACAGTGCAACTGATTTGATACGACGTAGGTTACGTCATGAAAAGGCCCTTCTGATTTTTGATAATGTGGATCAAGTTGAACAATTGGAAAAAATAGCTGTGCATCGTGAATGGTTAGGTGCGGGTAGTAGAATCGTTATCATTTCTAGAGATGAGCATATATTGAAAGAGTACGGAGTGGATGTAGTTTACAAAGTTCCACTTATGAATAGTACAGATTCTTACGAGTTATTTTGTCGAAAAGCTTTCAAAGTTGAGAAAATTATTATGAGTGATTATCAAAATTTGGCAAATGAGATACTAGATTATGCTAAAGGTCTACCACTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGTCATAGTGTGGCTGAATGGAAGAGTGCATTGGCTAGATTGAGAGAAAGTCCGCATAATGATGTCATGGATGTGCTGCACTTAAGTTTTGATGGGTTAGATGAAAAGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAACTCTCAGCCCGAGAAATATGTTAAAAACGTTCTAAATTGTTGTGGATTTCATGCTGATATTGGATTAGGAGTTCTCATTGATAAATCACTTATAAGCATTGAGGATGCAAATATTAAAATGCATTCTTTGTTGGAAGAGCTAGGCAGAAAAATTGTGCAAGAAAATTCAAGCAAAGAGCAAAGAAAGTGGAGCAGGATCTGGTCCAAAAAACAACTCTACAACGTTATGATGGAGAATATGGAAGAGCATGTTGAAGCCATATTTTTGAATGATGATGGGATTGATATGAACGTTGAACACTTTTCAAAAATGAGTAATCTTAGATTGCTCATCATCTACAACAATTCGGCATGGAATTATACAACCTATAAAAGACCTTGCTTTCATGGAAAACTGAGTTGTCTTTCAAACAAATTAAGGTATTTTGACTGGGAGCATTATCCTTTCTGGGAATTGCCATTAAGTTTTCACCCTAATGAACTTGTTGAATTGATCTTGAAGAATAGCAGCTTCAAACAACTATGGAAAAGCAAGAAGTATTTTCCCAATTTGAAAGCATTGGATCTAAGTGACTCCAAAATAGAAAAGATAATAGATTTTGGAGAGTTCCCGAATCTTGAGTCGTTAAATTTGGAAAGATGTGAAAAACTTGTGGAGTTGGATTCATCGATTGGACTTCTAAGAAAGCTTGTTTACTTGAATTTGGACTATTGCATAAATTTAGTAAGCATACCCAACAGCATATTCTGTCTTAGCTCTCTTGAAGATCTATATATGTGTGGCTGTTCCAAAGTGTTTAACAATTCAAGGAATTTGATCGAGAAGAAGCATGATATAAATGAAAGTTTCCACAAATGGATCATTTTGCCCACTCCCACGAGAAACACATATTGCTTGCCATCATTGCATAGCTTATATTGTTTGCGTCAAGTTGATATTAGCTTTTGCCATCTAAACCAAGTTCCTGATGCAATTGAAGGTTTACATTCGCTAGAAAGATTATATTTAGCGGGAAACTATTTTGTGACACTACCTAGCTTGAGGAAGCTTTCCAAACTTGAATATTTAGATTTGCAGCATTGCAAGTTGTTGGAATCTTTGCCTCAACTTCCTTTTCCTACCACTACTGAACAAGATTGGTGGATTCGTTCACAGGATTTTTCGGGATATAGGCGGACTAATCACGGTCCTGCTTTAATAGGATTGTTCATTTTCAACTGTCCAAAATTGGTTGAGAGGGAACGTTGCAGTAGCATCACAATTTCATGGATGGCACATTTCATTCAGGCAAACCAACAACCCAACAAATTGTCGGCGCTTCAAATTGTAACTCCAGGAAGTGAAATACCAAGTTGGATCAACAATCAGAGCGTGGGTGCTTCAATATCAATTGATGAATCTCCTGTTATAAATGACAATAACAATAATATTATTGGCTTTGTAAGTTGTGTATTAATTTCCATGGCACCTCAAGATACAACAATGATGCATTGTTTTCCACTCTCCATCTATATGAAAATGGGTGCTAAGCGAAACCGTAGAAAGCTTCCAGTGATTATCGTAAGAGATCTTATTACAACCAAATCAAGTCACCTATGGCTAGTCTACTTCCCCCGAGAGTCCTATGATGTTTATGGAACTCTCCGTGCGAAATGTTATCAGGGTGAAGTTGTGGGTTTTGAGGTGAAAAGTTGCGGGTATCGTTGGGTATGTAAACAAGACCTACAAAAGTTCAACTTCACAATGATGAATCATGAAAATTCCTTGGCTCAGAAGTGTAAGATTATGGCAATTGAAGGCGAGACACAACCACAACCAGAACAAGAATCATTCATCTCACAAGTCATAACTACTTCGAAGAAAGAAGAAACAACAGATGGATCACAAGAAGGTCAAGAAGAGTTTCAACCTAACACGTTTGGATTTTTAAAAAATAAATCTCAAACCTCTACAGTTGAAGTGGCTGATGAAAGTGTAACAGAAAATGTAGTTGATCAAATTGTTGCCGAATATGAACAACAATCACATATCGATAATGGAAAGGAAGATGATTCCGCTGCAACACAGACAGACAGTGATGCAGTTGAGCCTTGCCATGTTATCACAGAATCAGAAGATGACAATGTTGAAGATGTTCTAGATAACAATGAGATTGATGCTAGTTTGGCCGGACAAAGTGGTGATTCATCTCCTGAGGGCAGCATGAATAAAGATGTAACTGAAGAAGTGCAAGAAGAACAAACACCTGTCGCAGCACATGTTGAAGAGGTTGCAATTGCATCTGAGACAAACAGCATATCTAATTCTACTGAAGAAACAGAAGGCTCGAGTAAAGGTTTTAATTTCAGTCGCCCGATGATCATCTTGTTTTTGTCCCTACCTGTGTTGAAATTATTAGGGATGTGGGTACGAAGGTGA 3780 0.372 MANSSNSSLALVTSSRRNYYDVFVTFRGEDTRNNFTDYLFDALETKGIYAFRDDTNLKKGEVIGPELLRAIEGSQVFVAVFSRNYASSTWCLQELEKICECVQGPEKHVLPVFYDIDPSEVRKQSGIYCESFVKHEQRFQQDPHKVSRWREALNQVGSISGWDLRDKPQAGEIKKIVQNIMNILDCKSSFISKDLVGINSRIEVLQNHLLLDSVDGVCAIGICGMGGIGKTTLAMTLYGQISHQFSASCFIDDVSKIYRLYDGPLDAQRQILLQTVGIEHHQICNRYSATDLIRRRLRHEKALLIFDNVDQVEQLEKIAVHREWLGAGSRIVIISRDEHILKEYGVDVVYKVPLMNSTDSYELFCRKAFKVEKIIMSDYQNLANEILDYAKGLPLAIKVLGSFLFGHSVAEWKSALARLRESPHNDVMDVLHLSFDGLDEKEKEIFLDIACFFNSQPEKYVKNVLNCCGFHADIGLGVLIDKSLISIEDANIKMHSLLEELGRKIVQENSSKEQRKWSRIWSKKQLYNVMMENMEEHVEAIFLNDDGIDMNVEHFSKMSNLRLLIIYNNSAWNYTTYKRPCFHGKLSCLSNKLRYFDWEHYPFWELPLSFHPNELVELILKNSSFKQLWKSKKYFPNLKALDLSDSKIEKIIDFGEFPNLESLNLERCEKLVELDSSIGLLRKLVYLNLDYCINLVSIPNSIFCLSSLEDLYMCGCSKVFNNSRNLIEKKHDINESFHKWIILPTPTRNTYCLPSLHSLYCLRQVDISFCHLNQVPDAIEGLHSLERLYLAGNYFVTLPSLRKLSKLEYLDLQHCKLLESLPQLPFPTTTEQDWWIRSQDFSGYRRTNHGPALIGLFIFNCPKLVERERCSSITISWMAHFIQANQQPNKLSALQIVTPGSEIPSWINNQSVGASISIDESPVINDNNNNIIGFVSCVLISMAPQDTTMMHCFPLSIYMKMGAKRNRRKLPVIIVRDLITTKSSHLWLVYFPRESYDVYGTLRAKCYQGEVVGFEVKSCGYRWVCKQDLQKFNFTMMNHENSLAQKCKIMAIEGETQPQPEQESFISQVITTSKKEETTDGSQEGQEEFQPNTFGFLKNKSQTSTVEVADESVTENVVDQIVAEYEQQSHIDNGKEDDSAATQTDSDAVEPCHVITESEDDNVEDVLDNNEIDASLAGQSGDSSPEGSMNKDVTEEVQEEQTPVAAHVEEVAIASETNSISNSTEETEGSSKGFNFSRPMIILFLSLPVLKLLGMWVRR* 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2303 1259 Gene3D Ribonuclease Inhibitor 486 738 IPR032675 -
Mtr6g2303 1259 MobiDBLite consensus disorder prediction 1073 1094 - -
Mtr6g2303 1259 Pfam Leucine rich repeat 762 817 IPR001611 GO:0005515
Mtr6g2303 1259 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1096 IPR044974 GO:0006952
Mtr6g2303 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr6g2303 1259 Gene3D - 13 188 IPR035897 -
Mtr6g2303 1259 Gene3D - 355 439 IPR042197 -
Mtr6g2303 1259 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g2303 1259 Gene3D Ribonuclease Inhibitor 748 911 IPR032675 -
Mtr6g2303 1259 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1096 - -
Mtr6g2303 1259 ProSiteProfiles Leucine-rich repeat profile. 784 805 IPR001611 GO:0005515
Mtr6g2303 1259 Gene3D - 189 349 IPR027417 -
Mtr6g2303 1259 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2303 1259 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g2303 1259 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g2303 1259 PRINTS Disease resistance protein signature 802 818 - -
Mtr6g2303 1259 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Mtr6g2303 1259 Pfam TIR domain 20 181 IPR000157 GO:0007165
Mtr6g2303 1259 MobiDBLite consensus disorder prediction 1127 1147 - -
Mtr6g2303 1259 MobiDBLite consensus disorder prediction 1175 1191 - -
Mtr6g2303 1259 Pfam NB-ARC domain 201 424 IPR002182 GO:0043531
Mtr6g2303 1259 Pfam C-JID domain 899 1029 IPR045344 -
Mtr6g2303 1259 MobiDBLite consensus disorder prediction 1175 1203 - -
Mtr6g2303 1259 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr6g2303 1259 SUPERFAMILY "Winged helix" DNA-binding domain 426 529 IPR036390 -
Mtr6g2303 1259 SUPERFAMILY L domain-like 555 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2303 Mtr-Chr6 40853202 40858948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2303 20 839 WRKY Transcription Factor Family AT4G12020 30.404 1.10e-79 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2303 - - mtr:MTR_6g488300 1468.37