Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2302 ATGGCTAGCAGCAGCAACTCGTCTTCAGCTCTTGTGACTTCTTCAAGAAGAAATTATTACGATGTGTTTATCACCTTTAGAGGTGAAGACACTCGGAACAATTTCACTGATTTTCTTTTTGATGCCCTTGAAACAAAAGGCATTTTTGCATTTCGAGATGACACTAATCTTCAACAGGGTGAATCCTTAGAACCCGAGCTTCTTCGAGCAATCAAAGGATTTCAGGTTTTCGTTGTCGTCTTTTCAAGGAACTATGCTTCCTCAACATGGTGCTTAAAAGAATTAGAGAAGATATGTGAATGCGTTAAGGGATCCAAAAAACATGTTATTCCTGTTTTCTATGATGTTGATCCTTCTGAGGTTCGAAAGCAAAGTGGTATTTATTGTGAAGCCTTTGTCAAGCATGAAAAAAGATTCCAACAAGGCTTTGAGATGGTGTCAAGATGGAGGGAAGCTCTAAAACAAGTGGGGAGTATATCTGGTTGGGATCTATGTGATAAGCCACAAGCTGGAGAGATTAAAAAGATTGTTCAAAAGATAATGAATATATTGGAGTGCAAATCTTCATGTGTTTCAAAAGATTTAGTTGGGATTGATTCTCCTATAGAAGCATTAAAAAATCATTTGGTTTTGGACTTGGTTGATGGTGTTCGTGCTATAAGAATTTGTGGAATGGGAGGAATAGGGAAGACAACCCTTGCTATGAATTTATATGGCCAAATCTCTCATCGATTTAGTGCATCCTGTTTCATTGATGATGTAAGCAAAATTTATAGATTATATGATGGCCCAATTGATGCACAAAAGCAAATCCTACATCAAACTCTCGGCATAGAACACCATCAAATATGCAATCGTTACAGTGCAATTGATTTGATACAACGTAGGCTACGTCGTGAAAAGGCTCTTCTGATTTTTGATAATGTGGATCAAGTTGAACAATTGGAAAAAATAGGTGTGCATCGTGAATGTTTAGGTGCGGGTAGTAGAATTATTATCATTTCTAGAGATGAACATATATTGAAAGAGTATGAAGTGGACGTAGTTTACAAAGTTCAACTTTTGAATTGGACCGAATCTCATAAGTTATTTTGTCGAAAAGCTTTCAAAGCTGAGAAAATTATTATGAGTAATTATCAAAATTTGGCAAATAAGATATTGAATTATGCTAGTGGTCTACCACTTGCAATTAAAGTATTGGGCTCATTTTTGTTCGGTCGTAATGTGACTGAATGGAAGAGTGCATTGGCTAAATTGAGAGAAAGTCCAAATAAAGATGTCATGGATGTGCTGCAATTAAGTTTTGATGGGTTAGAGAAGACGGAAAAACAAATATTTCTTGATATTGCTTGTCTTTTCAATTGTCTGGACATGGAATATGTTAAAAACATTCTAAATTGTTGTGGATTTAATGCTGATATTGGAATAAGAGTTCTCATTGATAAATCACTTATAAGCATTAATGGTCAAAATATTGAAATGCATTCTTTGTTGAAAGAGCTAGGCAGAAAAATTGTGCAAAAAACTTCAAGCAAAGAGCCAAGAAAATGGAGCAGGTTGTGGTCTGCAAAACAACTCTACGATGTTAAGATGGAGAATATGGAAAAGAATGTTGAAGCCATACTTTTGAAACGTAATGAAGAGGTGGATGTTGAACACTTATCAAAAATGAGTAATCTTAGACTTCTCATCATCAAGTGCAATTGGAATATCTCAGGAGGCTCAAATTTTCTTTCAAACGAATTAAGATATGTTGATTGGCATGAATATCCTTTCAAGTATTTGCCAACAAGTTTTCACCCCAATGAACTTGTAGAATTGATCTTGTGGTGTAGCAACATTAAACAACTATGGAAAAACAAGAAGTATCTTCGCAATTTGCGAAAATTGGATCTAATGGGTTCAATAAATCTAGAAAAGATAATAGATTTTGGAGAGTTCCCAAATCTTGAGTGGTTAGATTTGGAATTATGTAAGAACCTTGTTGAGTTGGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAATTTGGGAGGATGTAAAAAACTTGTGGAGTTGGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTGCTTGAATGTAAAAGATTGTGAAAATCTGGTAAGCATACCCAACAACATATTCGATCTTAGCTCTCTTGAATATCTAAATATGAATGGCTGTTCCAAAGTGTTTAACAATTCATTGCCATCTCCCACAAGACACACATATTTGTTGCCATCCTTGCATAGCTTAGATTGTTTGCGTGGAGTTGACATTAGCTTTTGCAATCTAAGCCAAGTTCCTGATGCAATTGAAGATTTACATTGGCTAGAAAGATTAAATTTAAAGGGAAACAATTTTGTGACACTACCTAGCCTGAGGAAGCTTTCCGAACTTGTATATTTAAATTTGGAACACTGCAAGTTGTTGGAATCTTTGCCTCAACTTCCTTCCCCTACCACTATTGGGCGGGAACGAGATGAGAATGACGATGACTGGATTTCAGGATTGGTCATTTTCAACTGTTCAAAATTGGGTGAGAGGGAACGTTGCAGTAGCATGACATTTTCATGGATGATACAATTCATTCTGGCCAATCCACAATCCACCTCTCAAATTGTTATTCCAGGAAGTGAAATACCAAGTTGGATCAACAATCAGTGTGTGGGTGATTCAATACAAATAGACCTATCTCCTGCTATGCATGATAATAACAATCAGAGCCATTACTTTGTATGTTGTGCAGTATTTACCATGGTGCCTCAGTTGTCAGCCAATATGTTACTGATTTTCGATAATTCCAGCATTATGTGGATTCCCATAAGTATCAATAGAGATCTTGTTACGACCGAATCAAGTCACCTATGGATAGCCTACATCCCCCGAGATTCCTATCCTGAAAATGGAAATATGTATTTTAAAATGGAAATAAGTATTATAAAATTATTGGGTATCGAGGAGAGTGAAGGTTTGGGTTTTGAGGTGAAGAGTTGCGGGTATCGTTGGGTATGTAAACAAGACCTACGAAAGTTGAACTTCACAATGATGAATCATGAAAATTCCTTTGCTCAAAAGTGTAAGATTATGGCAATTGAAGGCGAGACACAACCACAACCAGAACAAGAATCATTCATCTCACAAGTCATAACTACTTCGAAGAAGGAAGAAACAACAGATGGATCACAAGAAGGTCACGAAGAGTTTCAACCTAACACGTTTGGATTTTTAAAAAATAAATCTCAAACCTCTACAGTTGAAGTGGCTGATGAAAGTGTAACAGAAAATGTAGTTGATCAAATTGTTGCCGAATATGAACAACAATCACATATCGATAATGGAAAGGAAGATGATTCCGCTGCAACACAGACAGACAGTGATGCAGTTGAGCCTTGCCATGTTATCACAGAATCAGAAGATGTAACAGAAGAAACTGAACAAGTTCCCTCTCCTGAAAGTCCTGCCACTGAAGAAGTGCAAGAAGAACAAATACCTGTCACCGTACAAGTTGAAGAGGTTGCAATTGCATCCGAGACAAACCGGATATCTAATTCTAATGGACAAACAGAAGGCTCGAGTGAAGGTTTCAATTTCAGTCGCCCGATGATCATCTTGTTTTTGTCCCTACCTGTGTTGAAATTATTAAGGATGTGGGTATGGAGGTGA 3672 0.3668 MASSSNSSSALVTSSRRNYYDVFITFRGEDTRNNFTDFLFDALETKGIFAFRDDTNLQQGESLEPELLRAIKGFQVFVVVFSRNYASSTWCLKELEKICECVKGSKKHVIPVFYDVDPSEVRKQSGIYCEAFVKHEKRFQQGFEMVSRWREALKQVGSISGWDLCDKPQAGEIKKIVQKIMNILECKSSCVSKDLVGIDSPIEALKNHLVLDLVDGVRAIRICGMGGIGKTTLAMNLYGQISHRFSASCFIDDVSKIYRLYDGPIDAQKQILHQTLGIEHHQICNRYSAIDLIQRRLRREKALLIFDNVDQVEQLEKIGVHRECLGAGSRIIIISRDEHILKEYEVDVVYKVQLLNWTESHKLFCRKAFKAEKIIMSNYQNLANKILNYASGLPLAIKVLGSFLFGRNVTEWKSALAKLRESPNKDVMDVLQLSFDGLEKTEKQIFLDIACLFNCLDMEYVKNILNCCGFNADIGIRVLIDKSLISINGQNIEMHSLLKELGRKIVQKTSSKEPRKWSRLWSAKQLYDVKMENMEKNVEAILLKRNEEVDVEHLSKMSNLRLLIIKCNWNISGGSNFLSNELRYVDWHEYPFKYLPTSFHPNELVELILWCSNIKQLWKNKKYLRNLRKLDLMGSINLEKIIDFGEFPNLEWLDLELCKNLVELDPSIGLLRKLVYLNLGGCKKLVELDPSIGLLRKLVCLNVKDCENLVSIPNNIFDLSSLEYLNMNGCSKVFNNSLPSPTRHTYLLPSLHSLDCLRGVDISFCNLSQVPDAIEDLHWLERLNLKGNNFVTLPSLRKLSELVYLNLEHCKLLESLPQLPSPTTIGRERDENDDDWISGLVIFNCSKLGERERCSSMTFSWMIQFILANPQSTSQIVIPGSEIPSWINNQCVGDSIQIDLSPAMHDNNNQSHYFVCCAVFTMVPQLSANMLLIFDNSSIMWIPISINRDLVTTESSHLWIAYIPRDSYPENGNMYFKMEISIIKLLGIEESEGLGFEVKSCGYRWVCKQDLRKLNFTMMNHENSFAQKCKIMAIEGETQPQPEQESFISQVITTSKKEETTDGSQEGHEEFQPNTFGFLKNKSQTSTVEVADESVTENVVDQIVAEYEQQSHIDNGKEDDSAATQTDSDAVEPCHVITESEDVTEETEQVPSPESPATEEVQEEQIPVTVQVEEVAIASETNRISNSNGQTEGSSEGFNFSRPMIILFLSLPVLKLLRMWVWR* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2302 1223 Pfam TIR domain 20 184 IPR000157 GO:0007165
Mtr6g2302 1223 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g2302 1223 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Mtr6g2302 1223 Pfam C-JID domain 878 1011 IPR045344 -
Mtr6g2302 1223 Gene3D Ribonuclease Inhibitor 503 733 IPR032675 -
Mtr6g2302 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr6g2302 1223 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr6g2302 1223 MobiDBLite consensus disorder prediction 1149 1165 - -
Mtr6g2302 1223 Gene3D - 13 187 IPR035897 -
Mtr6g2302 1223 SUPERFAMILY L domain-like 550 819 - -
Mtr6g2302 1223 ProSiteProfiles Leucine-rich repeat profile. 779 800 IPR001611 GO:0005515
Mtr6g2302 1223 Pfam NB-ARC domain 201 425 IPR002182 GO:0043531
Mtr6g2302 1223 SUPERFAMILY "Winged helix" DNA-binding domain 426 528 IPR036390 -
Mtr6g2302 1223 Gene3D - 188 350 IPR027417 -
Mtr6g2302 1223 Gene3D Ribonuclease Inhibitor 734 826 IPR032675 -
Mtr6g2302 1223 Gene3D - 355 439 IPR042197 -
Mtr6g2302 1223 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2302 1223 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g2302 1223 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g2302 1223 PRINTS Disease resistance protein signature 797 813 - -
Mtr6g2302 1223 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 679 733 IPR044974 GO:0006952
Mtr6g2302 1223 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 679 IPR044974 GO:0006952
Mtr6g2302 1223 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 760 984 IPR044974 GO:0006952
Mtr6g2302 1223 MobiDBLite consensus disorder prediction 1055 1075 - -
Mtr6g2302 1223 MobiDBLite consensus disorder prediction 1109 1168 - -
Mtr6g2302 1223 PANTHER TMV RESISTANCE PROTEIN N-LIKE 760 984 - -
Mtr6g2302 1223 PANTHER TMV RESISTANCE PROTEIN N-LIKE 26 679 - -
Mtr6g2302 1223 PANTHER TMV RESISTANCE PROTEIN N-LIKE 679 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2302 Mtr-Chr6 40841181 40849807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2302 20 817 WRKY Transcription Factor Family AT4G12020 30.508 1.56e-80 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2302 - - mtr:MTR_6g488300 1508.04