Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2301 ATGGCTAGCAATAGCAACTCATCTTCAGCTCTTGTGACTTCTTCAAAAAGATATTATTATGATGTGTTTGTCACCTTCCGAGGTGAAGACACTCGCAACAATTTCATTGATTTTCTTTTTGATGCCCTGGAAACAAAAGGCATTCTTGTATTTCGGGATAACAGAAATCTTCAAAAAGGTGAATCCATAGGACCTGAACTTCTTCAATCAATCGAAGGATCTCAGGTTTATGTTGCGGTTTTCTCAAGAAACTATGCTTTCTCAACATGGTGTTTGCAAGAAATAGAGAAGATTTGGGAATGTGTCCAAGGATCCGAAAAACTTGTTCTTCCTGTTTTTTATGATGTTGATCCTTCTGAGGTTCGAAAGCAAAGTGGAATTTATGATAAAGCTTTTGTCAAACATGAACAAAGATTCCAACAAAACTCTCAGATGGTGTCAAGATGGAGAGAAGCTCTAAAACAAGTGGGGAGTATCTCTGGTTGGGATCTATGTGATAAGCCACAAGTTGGTGAGATTAAAAAGATTGTTCAAAGGATAATGAATATATTGGAGTGCAATTCTTCATGTGTTTCGAAAGATTTAGTAGGGATTGATTCTCCTATAGAAGCATTACAAAATCATTTGCTTTTGGACTCAGTTGATGGTGTTCATGCTATAGGAATTTGTGGAATGGGAGGAATAGGGAAGACAACCCTTGCCATGACTTTATATGACCAAATATCTCATCGATTTAGTGCAAATTGTTTTATTGATGATGTAAGCAAAATATATAGATTATGTGATGGTCCTTTGGATGCACAAAAGCAAATTCTATTTCAAACTCTCGACATAAAACACCATCAAATATGCAATCGTTACATTGCAACTGATTTGATACGACGTAGGCTAAGTCGTGAAAAGACCCTAGTGATTCTTGATAATGTGGATCAAGGTGAACAATCGGAAAAAATAGCTGTGCATCGTGAGTGGTTAGGTGCAGGTAGTAGAATAATTATCATTTCTAGAGATGAGCATATATTGAAAGAGTATGGAGTGGACGTAGTTTACAAAGTTCCACTTTTGAATCGGACCGATTCTCACAAGTTATTTTGTCAAAAAGCTTTCAAACATGAGAAAATTATTATGAGTAGTTACCAAAATTTGGATTTTGAGATACTGAGTTATGCTAATGGTCTTCCACTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGTCGTAATGTGACTGAATGGAAGAGTGCATTGGCTAGATTGAGAGAAAGGCCAGATAACGATGTCATGGATGTGCTACAGTTAAGTTTTGATGGTCTAAATCATATGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAACCGCGAATCAGAGAAATATGTAAAAAACGTTCTAAATCATTGTGGATTTCATGCTGATATTGGATTAAGAGTTCTCATTGATAAATCACTTATAAGCATTAATAGTGATTCAGTGATTGAAATGCATTCTTTATTGGTTGAGCTAGGCAGAAAAATTGTGCGAGAAAATTCAAGCAAAGAGCAAAGAAAGTGGAGCAGGGTGTGGTCCCAAAAACAACTCTACAATGTTACGATGGAGAAAATGGAAAGGCATGTTGAAGCCATAGTTTTGAATGATGATGATGTTGAAGAGGTGGACGTTGAACAGTTGTCAAAAATGAGTAATCTTAGATTACTCATCATCAAGTGGGGTCCGAATATCCCAAGTAGCCCATCGAGTCTTTCAAACACATTAAGATATGTTGAGTGGAATTATTATCCTTTCAAGTATTTGCCATCAAGTTTTCACCCCAGTGATCTTGTAGAGTTGATCTTGATGTATAGCGACATCAAACAACTATGGAAGAACAAGAAGTATCTTCCCAATTTGAGAAGATTGGATCTAAGACACTCCAGAAATCTAGAAAAGATAGTAGATTTTGGAGAGTTCCCGAATCTTGAGTGGTTAAATTTGGAATTATGTGCGAACCTTGTTGAGTTAGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAATTTGGAAGGTTGCGTAAATCTAGTAAGCATACCCAACAACATATCCGGTCTTAGCTCTCTTGAAGATCTAAATATATGTGGTTGTTCCAAAGCGTTTAGCAGTTCAAGCATCATGTTGCCTACTCCCATGAGAAACACATATTTGTTGCCATCCGTGCATAGCTTAAATTGTTTGCGTAAAGTTGACATTAGCTTTTGTCATCTAAATCAAGTTCCCGATTCAATTGAATGTTTACACTCACTAGAAAAATTAAATTTAGGGGGAAACGATTTTGTGACACTACCTAGCTTGAGGAAGCTTTCCAAACTTGTATATTTAAATTTGGAGCATTGCAAGTTCTTGAAATCTTTTCCTCAACTTCCTTCTCTTACCACTATTGGGCGGGATCATCGTGAGAACAAGCATAAGTTTGGGTGGATCACAGGATTGATCGTTTTCAACTGTCCAAAACTGGGTGATAGGGAGTGTTGCAGTAGCATGACATTTTCATGGATGACACAATTTATTAAGGCAAACCGACAAACCTACCCTGCCTATTTTGATACGATTCAAATTGTTACTACAGGAAGTGAAATACCGAGTTGGATCAACAATCAGAGCATGGGTGATTCAATACTAATAGACAAATTGCCTATTATGCATGACAATAACAATAATATCATTGGCTTTCTATGTTGTGCAGTATTTACAATGGAACCTCATCCAGAGTGCTTTTCATGGGCCAATATGAAACTGAGTTTCAATCATCCTATCAAAATGAGTGTTCCAGTCATTCTCAATGGAGGTCTTGTTACGACCAAATCAAGTCACCTATGGATAATCTACTTCCCACGAGAGTCCTCGGATGAATTTGGAAATATCTGTTTTGACATTTTTAAGGGGCAAGCTTTGGGTATGGAGGTGAAGAGTTGCGGGTATCGTTGGGTATGTAAACAAGACCTACAAGAATTCAACTTACCAATGATAAATCACGAAAATTCCTTGGCTCCGAAGTGTAAGATTTTGGCAATTGAAGATGGGACACAACTACAACCACAACAAGAATCATTCATGTCACAAGTCATAACTAGTACACCGAGAAGAAACAACAGATGGATCACAAAAAATTCAACAAGTGATAACAAGTTAACCGCAAAAACAATCTCTGTTGTCAACCGCAAGCAGAGAAATAAATCTCGAACCTCCATATCAGCCACAGAAAGAGAAGTATCCGTGGAGGCAGCAGATTCACCTGTTGCAGATGAAGTTTCTACTGAATCTCAACAGAAAAAAATCTCAAACCTCCATATCATTTGTCGATTCATTGGTCGGTTCCTCAACAACTTTTGCCAACAAGGTAGCACGGATACGAACATCAGATACGACATGGACACTGTAAATTCAGATGCTGAAAGTTTGGTTTCTGAAGAAGATTCAGATGCTGTAATTTAA 3474 0.3708 MASNSNSSSALVTSSKRYYYDVFVTFRGEDTRNNFIDFLFDALETKGILVFRDNRNLQKGESIGPELLQSIEGSQVYVAVFSRNYAFSTWCLQEIEKIWECVQGSEKLVLPVFYDVDPSEVRKQSGIYDKAFVKHEQRFQQNSQMVSRWREALKQVGSISGWDLCDKPQVGEIKKIVQRIMNILECNSSCVSKDLVGIDSPIEALQNHLLLDSVDGVHAIGICGMGGIGKTTLAMTLYDQISHRFSANCFIDDVSKIYRLCDGPLDAQKQILFQTLDIKHHQICNRYIATDLIRRRLSREKTLVILDNVDQGEQSEKIAVHREWLGAGSRIIIISRDEHILKEYGVDVVYKVPLLNRTDSHKLFCQKAFKHEKIIMSSYQNLDFEILSYANGLPLAIKVLGSFLFGRNVTEWKSALARLRERPDNDVMDVLQLSFDGLNHMEKEIFLDIACFFNRESEKYVKNVLNHCGFHADIGLRVLIDKSLISINSDSVIEMHSLLVELGRKIVRENSSKEQRKWSRVWSQKQLYNVTMEKMERHVEAIVLNDDDVEEVDVEQLSKMSNLRLLIIKWGPNIPSSPSSLSNTLRYVEWNYYPFKYLPSSFHPSDLVELILMYSDIKQLWKNKKYLPNLRRLDLRHSRNLEKIVDFGEFPNLEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSKAFSSSSIMLPTPMRNTYLLPSVHSLNCLRKVDISFCHLNQVPDSIECLHSLEKLNLGGNDFVTLPSLRKLSKLVYLNLEHCKFLKSFPQLPSLTTIGRDHRENKHKFGWITGLIVFNCPKLGDRECCSSMTFSWMTQFIKANRQTYPAYFDTIQIVTTGSEIPSWINNQSMGDSILIDKLPIMHDNNNNIIGFLCCAVFTMEPHPECFSWANMKLSFNHPIKMSVPVILNGGLVTTKSSHLWIIYFPRESSDEFGNICFDIFKGQALGMEVKSCGYRWVCKQDLQEFNLPMINHENSLAPKCKILAIEDGTQLQPQQESFMSQVITSTPRRNNRWITKNSTSDNKLTAKTISVVNRKQRNKSRTSISATEREVSVEAADSPVADEVSTESQQKKISNLHIICRFIGRFLNNFCQQGSTDTNIRYDMDTVNSDAESLVSEEDSDAVI* 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2301 1157 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2301 1157 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g2301 1157 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g2301 1157 PRINTS Disease resistance protein signature 625 641 - -
Mtr6g2301 1157 Pfam NB-ARC domain 200 423 IPR002182 GO:0043531
Mtr6g2301 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 449 IPR027417 -
Mtr6g2301 1157 Gene3D - 186 349 IPR027417 -
Mtr6g2301 1157 Gene3D Ribonuclease Inhibitor 722 814 IPR032675 -
Mtr6g2301 1157 Gene3D Ribonuclease Inhibitor 497 717 IPR032675 -
Mtr6g2301 1157 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Mtr6g2301 1157 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g2301 1157 Pfam C-JID domain 869 995 IPR045344 -
Mtr6g2301 1157 Gene3D - 13 185 IPR035897 -
Mtr6g2301 1157 SUPERFAMILY "Winged helix" DNA-binding domain 426 528 IPR036390 -
Mtr6g2301 1157 Gene3D - 354 439 IPR042197 -
Mtr6g2301 1157 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr6g2301 1157 SUPERFAMILY L domain-like 539 806 - -
Mtr6g2301 1157 MobiDBLite consensus disorder prediction 1070 1100 - -
Mtr6g2301 1157 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 638 697 - -
Mtr6g2301 1157 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 630 - -
Mtr6g2301 1157 Pfam TIR domain 20 184 IPR000157 GO:0007165
Mtr6g2301 1157 ProSiteProfiles Leucine-rich repeat profile. 761 782 IPR001611 GO:0005515
Mtr6g2301 1157 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 630 IPR044974 GO:0006952
Mtr6g2301 1157 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 638 697 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2301 Mtr-Chr6 40829531 40837119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2301 20 799 WRKY Transcription Factor Family AT4G12020 31.095 5.74e-86 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2301 - - mtr:MTR_6g088245 2315.42