Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2297 ATGGCTAGCAGCAACAATTCTTCTTTAGCTCTTGTGACTTCTTCAAGAAACAACTATTATGATGTGTTTGTCACCTTCAGAGGTGAAGACACTCGCAACAACTTTACTGATTTTCTTTTTGATGCCCTTGAAACAAAAGGCATTTTTGCATTTCGGGATGACACTAATCTTCAAAAGGGTGAATCTATAGAACCTGAGCTCCTTCGAGCAATCGAAGGATCTCGGGTTTTTGTTGCAGTCTTCTCAAGGAACTATGCTTCCTCAACATGGTGCCTGCAAGAATTAGAGAAGATATGTAAATGCGTTCAGAGATCCAGAAAACATATTCTTCCTGTTTTTTATGATGTTGATCCTTCTGTGGTTCGAAAGCAAAGTGGGATTTATTGTGAAGCCTTTGTCAAACATGAACAAAGATTCCAACAAGACTTTGAGATGGTGTCAAGATGGAGGGAAGCTCTAAAACATGTGGGGAGTATCTCTGGTTGGGATCTACGTGATAAGCCACAAGCTGGAGTGATTAAAAAGATTGTTCAAAAGATAATGAGTATATTGGAGTGCAAATCTTCATATATTTCAAAAGATTTAGTTGGGATTGATTCTCCTATAGAAGCATTAAAAAATCATTTGCTTTTGGACTCGGTTGATTGTGTTTGTGCTATAGGAATTTCTGGAATGGGAGGAATAGGGAAGACAACCCTTGCTATGGCTTTATATGACCAAATATCTCATCGATTTAGTGCATCCTGCTATATTGATGATGTAACCAAAATTTATAGTTTACATGATGGTCCACTCAATGCACAAAAGCAAATCCTATTTCAAACTCTAGGCATAGAACACCATCTAATAAGCAATCGTTACAACGCAACTGATTTGATACGACGTAGGCTACGTCGTGAAAAGGTCCTTCTGATTCTTGATAATGTCAATGAAGTTGAACAATTGGAAAAAATTGCAGTGCATCGCGAATGGTTAGGTGCAGGTAGTAGAATCGTTGTCATTTCTAGAGATGAGCATATATTGAAGGAGTATGGAGTGGATGTATTTTACAAAGTTCCACTCTTGAATATGGCCGAATCTCACAAGTTATTTTGTCGAAAAGCTTTCAAACTTGAGAACATTATATTGGGTAATTATCAAAATTTGGCAGATGAGATATTGAGTTATGCTAATGGTCTACCCCTAGCAATTACAATATTGGGCTCATTTTTGTTTGGTCGTAATGTGACTGAATGGAAGAGTGCATTGGCTAGATTGAGAGAAAGTCCAAATAAAGATGTCATGAATGTGCTGCATTTAAGTTTTGATGGGCTAGAGGAGACGGAACAAGAAATATTTCTTGATATTGCTTGTTTCTTCAACTCTTGGCCCATGGAAGAGGTTAAAAACATTCTAAATTGTTGTGGATTCCATGCTGATATTGGATTAAGAGTTCTCAATGATAAATCACTTATAAACACTAATTATTCACATATTGAAATACATTCTTTGTTGGAAGAGCTAGGCAGAAAAATTGTGCAAGAAAATTCAAGCAAAGAGCAAAGAAAGTGGAGCAGGGTCTGGTCCAAAAAGCAACTCTACAATGTTATGGTGGAGAATATGCAAAAACATGTCGAAGCCATAGTTTTGAATGAAGAGATAGATATGAACGCTGAACACGTGTCAAAAATGAATAATCTTAGATTCCTCATCTTCAAGTACGGTGGGTGCATCTCAGGAAGTCCATGGAGTTTTTCAAACAAATTAAAATATGTTGATTGGCATGAATATCCTTTTAAGTATTTGCCATCAAATTTTCACCCCAATGAACTTGTAGAATTGATCTTAAAGAGCAGCAAAATTGAACAACTATGGACAAACAAGAAGTATCTGCCCAATTTGAAACATTTGGATCTAAGACACTCCTTAGAACTAGTAAAGATACTAGATTTTGGGGAGTTCCCGAATCTTGAGAAGCTAAATTTGGAAGGATGTATAAACCTTGTGGAGTTGGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAATTTATATGAATGCAAAAATCTAGTAAGCATACCCAATAACATATTCAGTCTTAGCTCTCTTGAAGATCTAAATATGTATGGATGTTCCAAAGTGTTTAAAAATCCAATGCATTTGAAGAAGAAGCATGATATAAGTGAAAGTGCATCACATTCCAGATCAATGTCCTCTGTGTTCAAATGGATCATGTTACCTCACCACTTACGGTTTTCGGCTCCCACAAGACACACATATTTGTTGCCATCCTTGCATAGCTTAGTTTGTTTGCGAGACGTTGACATTAGCTTTTGCCATCTAAGCCAAGTTCCTGATGCAATTGAATGTTTATACTCGCTAGAAAGATTAAACTTAGAGGGAAACAATTTTGTGACTCTACCTAGCCTGAGGAAGCTTTCCAAACTTGTATATTTAAATTTGCAGCATTGCATGTTGTTGGAATCTTTGCCTCAACTTCCTTCTCCTACCAATATTATTCGTGAGAACAACAAATATTTCTGGATCTGGCCTACAGGATTGTTCATTTTCAACTGTCCAAAATTGGGTGAGAGGGAACGTTGCAGTAGCATGACATTTTCATGGTTGACACAATTCATTGAGGCAAACTCACAATCCTACCCTACGTCCTTTGATTGGATTCAAATTGTTACTCCAGGAAATGAAATACCAATTTGGATCAACAATAAGAGCGTGGGTGATTCAATACAAATAGACCGATCTCCTATTATGCATGACAATAACAATTATATCATTGGCTTTCTATGTTGTGCGGTATTTTCCATGGCACCTGATTGTTGGATGTTTCCATTTGCTCAAGAGTGGACCGATAAGAAATTGATTAGGATGAGCTGTAGGAGTGCTACCGTAATTCTCAATGGAGGTCTTGTTATGACCAAATCAAGTCACCTATGGATAATCTACTTCCCCCGAGAGTCCTATAGTGAATTTGAAAAAATCCATTTTAATATTTTTGAGGGTGAAGATTTTAGTTTGGAGGTGAAGAGTTGCGGGTATCGGTGGGTATGTAAAGAAGACCTGCAAGAATTCAACTTAACAATGATGAATCAAGAAAATTTCTTGGCTGGGAAGTGCAAGAATTTGGCAATTGAAGATGAGACACAACCAGAACCGGAACAAGAACAAGAATCATTCATCTCAAGAGTCATAAACTTCACAGAGAAGAAACAACAGATGGATCACAAGAAGGTGATGAAGAGTCTCAACCTGCAAAATACAATCTGCAATGAAGAGCATTGA 3285 0.3711 MASSNNSSLALVTSSRNNYYDVFVTFRGEDTRNNFTDFLFDALETKGIFAFRDDTNLQKGESIEPELLRAIEGSRVFVAVFSRNYASSTWCLQELEKICKCVQRSRKHILPVFYDVDPSVVRKQSGIYCEAFVKHEQRFQQDFEMVSRWREALKHVGSISGWDLRDKPQAGVIKKIVQKIMSILECKSSYISKDLVGIDSPIEALKNHLLLDSVDCVCAIGISGMGGIGKTTLAMALYDQISHRFSASCYIDDVTKIYSLHDGPLNAQKQILFQTLGIEHHLISNRYNATDLIRRRLRREKVLLILDNVNEVEQLEKIAVHREWLGAGSRIVVISRDEHILKEYGVDVFYKVPLLNMAESHKLFCRKAFKLENIILGNYQNLADEILSYANGLPLAITILGSFLFGRNVTEWKSALARLRESPNKDVMNVLHLSFDGLEETEQEIFLDIACFFNSWPMEEVKNILNCCGFHADIGLRVLNDKSLINTNYSHIEIHSLLEELGRKIVQENSSKEQRKWSRVWSKKQLYNVMVENMQKHVEAIVLNEEIDMNAEHVSKMNNLRFLIFKYGGCISGSPWSFSNKLKYVDWHEYPFKYLPSNFHPNELVELILKSSKIEQLWTNKKYLPNLKHLDLRHSLELVKILDFGEFPNLEKLNLEGCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYGCSKVFKNPMHLKKKHDISESASHSRSMSSVFKWIMLPHHLRFSAPTRHTYLLPSLHSLVCLRDVDISFCHLSQVPDAIECLYSLERLNLEGNNFVTLPSLRKLSKLVYLNLQHCMLLESLPQLPSPTNIIRENNKYFWIWPTGLFIFNCPKLGERERCSSMTFSWLTQFIEANSQSYPTSFDWIQIVTPGNEIPIWINNKSVGDSIQIDRSPIMHDNNNYIIGFLCCAVFSMAPDCWMFPFAQEWTDKKLIRMSCRSATVILNGGLVMTKSSHLWIIYFPRESYSEFEKIHFNIFEGEDFSLEVKSCGYRWVCKEDLQEFNLTMMNQENFLAGKCKNLAIEDETQPEPEQEQESFISRVINFTEKKQQMDHKKVMKSLNLQNTICNEEH* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2297 1094 Gene3D - 188 348 IPR027417 -
Mtr6g2297 1094 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr6g2297 1094 SUPERFAMILY L domain-like 551 857 - -
Mtr6g2297 1094 Gene3D - 354 439 IPR042197 -
Mtr6g2297 1094 SUPERFAMILY "Winged helix" DNA-binding domain 426 529 IPR036390 -
Mtr6g2297 1094 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g2297 1094 Pfam NB-ARC domain 200 425 IPR002182 GO:0043531
Mtr6g2297 1094 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 627 IPR044974 GO:0006952
Mtr6g2297 1094 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 635 827 IPR044974 GO:0006952
Mtr6g2297 1094 Gene3D Ribonuclease Inhibitor 493 726 IPR032675 -
Mtr6g2297 1094 Gene3D Ribonuclease Inhibitor 727 871 IPR032675 -
Mtr6g2297 1094 ProSiteProfiles Leucine-rich repeat profile. 788 809 IPR001611 GO:0005515
Mtr6g2297 1094 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 635 827 - -
Mtr6g2297 1094 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 627 - -
Mtr6g2297 1094 Pfam TIR domain 20 182 IPR000157 GO:0007165
Mtr6g2297 1094 Gene3D - 13 187 IPR035897 -
Mtr6g2297 1094 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2297 1094 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g2297 1094 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g2297 1094 PRINTS Disease resistance protein signature 622 638 - -
Mtr6g2297 1094 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Mtr6g2297 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr6g2297 1094 Pfam C-JID domain 894 1022 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2297 Mtr-Chr6 40749469 40753469 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2297 15 815 WRKY Transcription Factor Family AT4G12020 29.207 6.43e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2297 - - mtr:MTR_6g488300 1524.99