Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2295 ATGGCTAGCACCAGCAACTCATCTTCAGTTCTTGGGACTTCATCAAGAAGAAATTATTATGATGTATTTGTCACCTTCAGAGGTGAAGATACTCGGAACAATTTCACAGATTTTCTTTTTGATGCCCTTCAAACAAAAGGCATTATTGTATTTTCGGATGACACTAATCTTCCAAAAGGTGAATCCATTGGACCCGAGCTCCTTCGAGCAATCGAAGGATCTCAAGTTTTTGTTGCGGTCTTTTCAATAAACTATGCTTCCTCAACATGGTGTTTACAAGAATTAGAAAAGATATGTGAATGCGTTAAGGGATCAGGAAAACATGTTCTTCCAGTTTTCTATGATGTTGATCCCTCTGATGTGAGAAAGCAAAGTGGGATTTATGGTGAAGCCTTTATCAAACATGAACAAAGATTCCAACAAGAATTTCAGAAGGTGTCAAAATGGAGGGACGCTCTAAAACAAGTGGGGAGTATCTCTGGTTGGGATCTACGTGATAAGCCGCAAGCTGGAGAGATTAAAAAGATTGTTCAAACGATCTTGAATATATTGAAGTACAAATCTTCATGTTTTTCAAAAGATTTAGTTGGGATAGATTCTCGTTTAGACGGATTACAAAATCATTTACTTTTGGACTCGGTTGACAGTGTTCGTGCTATAGGAATTTGTGGAATGGGAGGAATAGGGAAGACAACCCTTGCTATGGCTTTATATGATCAAATATCTCATCGATTTAGTGCATCCTGTTTTATAGATGATGTAAGCAAAATTTATAAATTACATGATGGTCCCCTCGATGCACAAAAGCAAATCCTACTTCAAACTCTCGGCATAGAACACCATCAAATATGCAATCATTACAGCGTAACTAATTTGATACGAAGTAGGCTATGTCGTGAAAGGGTCCTTCTGATTCTTGATAATGTGGATCAAGTTGCACAGTTGGAAAAAATAGGTGTGCATCGTGAATGGTTAGGTGCAGGTAGTAGAATTATAATCATTTCTAGAGATGAGCATATATTGAAATACTATGGAGTGGATGCAGTTTACAAAGTTCCACTTTTGAATTGGACAGATTCTCACAAGTTATTTTGTCAAAAAGCTTTCAAATTTGAGAAAGTTATTATGAGTAATTATGAAAACTTAGCGTATGAGATTCTAGATTATGCTAATGGTCTACCACTAGCAATTATAGTATTGGGCTCATTTTTGTTTGGTCGTAATGTGACTGAATGGAAGAGTGCCCTGGCTAGATTGAGAGAAAGTCCAAATAATGATATCATGGATGTGCTGCAATTAAGTTTTGATGGGCTAGAGCATACTGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTTCAGCTACAGTTCGAAGGAATATGTTAAAAACATTCTAAATTGTTGTGGTTTTCATGCTGACATTGGATTAAGTGTTCTCAATGATAAATCACTTATAAGCCTTGGTGAGTCAACAATTATAATGCATTCTTTGTTGGAAGAGCTGGGCAGAAAAATTGTGCAAGAAAATTCAAGCAAAGAGCGAAGAAAGTGGAGCAGGGTGTGGTCCGAAAAACAACTCAACAATGTTACGATGGAGAAAATGGAAAAGCATGTTGAAGCCATAGAACTTTGGAGTTATGAAGAAGTGGTCGTTGAACACTTGGCAAAAATGAGTAATCTTAGATTGCTCATAATCAAGTGCGGTCGGAATATCCCAGGTAGTCTATCGAGCCTTTCAAATGCATTAAGATATGTTGAGTGGGATGGATATCCTTTCAAGTGTCTACCAACAAGTTTTCACCCCAATGACCTTATAGAATTGATCTTGATGAATAGCGACATCAAACAACTATGGAAAAACAAGAAGTATCTTCCCAATTTGAGAAGATTGGGTCTAAGTTACTCCAGAAAACTATTAAAGATTGTAGATTTTGGAGAGTTCCCGAATCTTGAGTGGTTAAATTTGGAAGGGTGTAAAAATCTTGTGGAGTTGGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAATTTAAAAAATTGCAAAAATCTAGTAAGCATACCCAACAACATATTTGATCTTTGCTCTCTTGAAGATCTAAATATGCGTGGTTGTTCTAAAGTGTTTAACAATCCAATGCATTTGAAGAAGTCTGGTCTATCCTCTACAAAGAAGAAGAACAAGAAGCAGCATGATACACGTGAAAGTGAATCACATTCCTCGTTTCCCACTCCCACAACAAACACATATTTGTTGCCATTCTCGCATAGCTTGCGTAGCATTGACATTAGCTTTTGCCATCTACGCCAAGTTCCTGATGCAATTGAATGTTTACATTGGCTAGAAAGATTAGATTTAGGGGGAAACAATTTTGTGACACTACCTAGCCTGAGGAAGCTTTCCAAACTTGTATATTTAAATTTGGAACATTGCAAGTTGTTGGAATCTTTGCCTCGACTTCCTTCTCCACCTACTAGTGGGCGGGATCAACAAGAGAACAATAATACTTTCATAGGTTTGTATGACTTTGGCATTGTTAGAAAGATTACAGGATTGGTCATTTTCAACTGTCCAAAATTGGCTGACTGTGAGAGGGAACGTTGCAGTAGCTTGACATTTTCATGGATGATACAATTCATTATGGCAAACCCGCAATCTTATTTGAATGAGTTTCATATTATAACTCCAGGAAGTGAAATACCAAGTTGGATCAACAATCAGAGCATGGGTGATTCGATACCAATAGAATTCTCTTCTGCTATGCATGATAATACCATTGGCTTTGTATGCTGTGTAGTATTTTCCGTGGCACCTCAGGTTTCAACTGTGTGGTTCAGAATTATGTGCATTGATTTGGATATTCCAGTAACTATCAAAGGAAGTCTTATTACGACCAAATCAAGTCACCTATGGATGATCTTCCTCCCTCGAGGGTCCTATGATAAATTTGAAAACATCTGTTGTTACGATGTGTTGGGTGAAGGCTTGGGTATGGAGGTGAAGAGTTGCGGGTATCGTTGGATATGTAAACAAGACCTACAAGAGTTCAATATAACAATGCTGAATCACGAAAATTCCTTGGCTCCAAAATATTCTTACATCCACGACAGCAGGATCGGTACTTTGGTAGAAGTAAACTGCGAGACAAATTTTGTCTCCCAAAGTGAAATTTTCAACGAGTTTGTCAATGATATAGAGTATGTTGTTACCAAAGACGTTCCTGAGGAATTCGTGAAGAAAGAAACGGAGATAGAAATGCAAAAGGAAGATCTTGCGTCAAAATCGGAGCAAATTAGATCAAGGATTGTTTAA 3315 0.3729 MASTSNSSSVLGTSSRRNYYDVFVTFRGEDTRNNFTDFLFDALQTKGIIVFSDDTNLPKGESIGPELLRAIEGSQVFVAVFSINYASSTWCLQELEKICECVKGSGKHVLPVFYDVDPSDVRKQSGIYGEAFIKHEQRFQQEFQKVSKWRDALKQVGSISGWDLRDKPQAGEIKKIVQTILNILKYKSSCFSKDLVGIDSRLDGLQNHLLLDSVDSVRAIGICGMGGIGKTTLAMALYDQISHRFSASCFIDDVSKIYKLHDGPLDAQKQILLQTLGIEHHQICNHYSVTNLIRSRLCRERVLLILDNVDQVAQLEKIGVHREWLGAGSRIIIISRDEHILKYYGVDAVYKVPLLNWTDSHKLFCQKAFKFEKVIMSNYENLAYEILDYANGLPLAIIVLGSFLFGRNVTEWKSALARLRESPNNDIMDVLQLSFDGLEHTEKEIFLHIACFFSYSSKEYVKNILNCCGFHADIGLSVLNDKSLISLGESTIIMHSLLEELGRKIVQENSSKERRKWSRVWSEKQLNNVTMEKMEKHVEAIELWSYEEVVVEHLAKMSNLRLLIIKCGRNIPGSLSSLSNALRYVEWDGYPFKCLPTSFHPNDLIELILMNSDIKQLWKNKKYLPNLRRLGLSYSRKLLKIVDFGEFPNLEWLNLEGCKNLVELDPSIGLLRKLVYLNLKNCKNLVSIPNNIFDLCSLEDLNMRGCSKVFNNPMHLKKSGLSSTKKKNKKQHDTRESESHSSFPTPTTNTYLLPFSHSLRSIDISFCHLRQVPDAIECLHWLERLDLGGNNFVTLPSLRKLSKLVYLNLEHCKLLESLPRLPSPPTSGRDQQENNNTFIGLYDFGIVRKITGLVIFNCPKLADCERERCSSLTFSWMIQFIMANPQSYLNEFHIITPGSEIPSWINNQSMGDSIPIEFSSAMHDNTIGFVCCVVFSVAPQVSTVWFRIMCIDLDIPVTIKGSLITTKSSHLWMIFLPRGSYDKFENICCYDVLGEGLGMEVKSCGYRWICKQDLQEFNITMLNHENSLAPKYSYIHDSRIGTLVEVNCETNFVSQSEIFNEFVNDIEYVVTKDVPEEFVKKETEIEMQKEDLASKSEQIRSRIV* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2295 1104 Pfam NB-ARC domain 201 424 IPR002182 GO:0043531
Mtr6g2295 1104 Gene3D Elongation factor Ts, dimerisation domain 1032 1103 IPR036402 -
Mtr6g2295 1104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 449 IPR027417 -
Mtr6g2295 1104 Pfam C-JID domain 897 1014 IPR045344 -
Mtr6g2295 1104 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr6g2295 1104 Gene3D - 188 348 IPR027417 -
Mtr6g2295 1104 ProSiteProfiles Leucine-rich repeat profile. 781 802 IPR001611 GO:0005515
Mtr6g2295 1104 MobiDBLite consensus disorder prediction 717 745 - -
Mtr6g2295 1104 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 635 820 - -
Mtr6g2295 1104 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 626 - -
Mtr6g2295 1104 SUPERFAMILY "Winged helix" DNA-binding domain 426 527 IPR036390 -
Mtr6g2295 1104 Gene3D - 13 187 IPR035897 -
Mtr6g2295 1104 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g2295 1104 SUPERFAMILY L domain-like 548 875 - -
Mtr6g2295 1104 Pfam TIR domain 20 184 IPR000157 GO:0007165
Mtr6g2295 1104 Gene3D - 355 439 IPR042197 -
Mtr6g2295 1104 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 626 IPR044974 GO:0006952
Mtr6g2295 1104 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 635 820 IPR044974 GO:0006952
Mtr6g2295 1104 Gene3D Ribonuclease Inhibitor 494 741 IPR032675 -
Mtr6g2295 1104 Gene3D Ribonuclease Inhibitor 742 874 IPR032675 -
Mtr6g2295 1104 SUPERFAMILY Elongation factor Ts (EF-Ts), dimerisation domain 1035 1104 IPR036402 -
Mtr6g2295 1104 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Mtr6g2295 1104 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2295 1104 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g2295 1104 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g2295 1104 PRINTS Disease resistance protein signature 799 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2295 Mtr-Chr6 40714013 40719704 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2295 20 819 WRKY Transcription Factor Family AT4G12020 31.055 9.80e-83 294