Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2291 ATGGCTAGCAGCAGCAACTCATCCATAGCTATGGTGACATCTAGAAGGAGAAATCATTACGACGTGTTTATCACCTTTAGAGGCGATGACACTCGCAACAATTTCACTGGTTATCTATTAGATGCTCTTAAAACAAACGGTATTTATGCATTTAGGGATGACACCAATCTTCAAAAAGGTGAATCCATAGGACCTGAGCTCCTTCGAGCAATCGAAGGATCCCAGGTTTTCGTTGCAGTATTCTCAAGAAACTATGCTTCCTCAACATGGTGCTTGCAGGAATTAGAAAAGATATGTGAATGTGTTCATGTATCAAGAAAACACATTCTTCCAGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATGGTGAAGCCTTTACCATACATGAACAAACATTCCAACAAGACTCTCAGATGGTGTCAAGATGGAGGGAAGCCCTAAAACAAGTGGGGAGTATCGCTGGTTGGGATCTATGTGATAAGCCACAATCTGCAGAGATTAGAATGATTGTTCAGACGATAATGAATATATTGGAGTGCAAATCTTCATGGGTTTCAAAAGATTTAGTTGCGATTAATTCTCCTATAGAAGCCTTACAAAGTCATTTGCATTTGGATTCGGTTGATGGAGTTCGTGCAATAGGAATTTGTGGAATGGGAGGAATAGGGAAAACAACCCTTTCTATGGCTTTATATGATCAAATATCCCATCGATTTAGTGGATCTTGTTTTATTGAAGATGTTGCCAAAAAATTTAGATTACATGATGGTCCCCTCGATGCACAAAAGGAAATCCTACTTCAAACCGTCGGAATAGAAGACCATCATATATGCAATCGTCACCGTGCAACTAATTTGATACAAAGTAGGCTACGTCGTGAAAGGGCCCTTCTTATTCTTGATAATGTAGATCGAGTTGAACAATTGGAAAAAATAGGTGTGCATCGTGAATGTTTAGGCGTAGGTAGTAGAATTATTATCATTTCTAGAGATGAGCATATATTGGAAGAGTATGGAGTGGATGTAGTCTACAAAGTTCCACTCTTGGATTGGAATGAAGCTCACATGTTATTTTGTCGAAAAGCTTTCAAAGAAGAGAAAATTATTATGAGAAATTATGAAAGTTTGGTATATGAGATACTGGATTATGCTAATGGTCTACCGTTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGTCGTAATGTGACGGAATGGAAGAGTGCATTGACTAGATTAAGAGAAAGTCCAGATAATGATGTCATGGATGTGCTGCAGTTAAGTTTTGATGGTCTAAAGGAGACTGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAACCGCAAATCGGAAAAATATGCTAAAAACATTCTAAATTGTTGTAGATTTCATGCTGATATTGGATTAAGAGTTCTTATTGATAAATCACTTATGAACATTAATGGTCAAAATCTTGAAATGCATTCTTTGTTGGAAGAGCTAGGCAGAAAAATTGTGCAAAATAGTTCAAGCAAAGAGCCAAGAAAATGGAGCAGGTTGTGGTCCACAGAACAACTCTACAATGTTATGTTGGAGAATATGGAAAAGCATGTTAAAGCCTTAGTTTTGAATGATGAAGAGGTTGGATTGAATGTTGAACACTTGTCAAAAATGAGTAATCTTAGATTGCTCATCATCATGTGGGGTGTGAATATCTCCGGAAGCCTATTGAGTCTTTCAAACAAATTAAGATATGTTCAGTGGACTGGATATCCTTTCAAATATTTGCCATCAAATTTTCACCCCAATGAACTTGTAGAATTGATCTTGCATAGTAGCAACATTAAACAACTATGGAGAAAGAAGAAGTATCTTCCCAATTTGAGGGGATTGGATCTACGATACTCCAAAAAACTAGTAAAGATAGTAGATTTCGGAGAGTTCCCGAATCTTGAGTGGTTAAATTTGGAAGGATGTATCAGCCTTTTGGAGTTGGATCCATCTATTGGACTTCTAAGAAACCTTGTTTACTTGAATTTAAAAGATTGCAAAAATCTTGTAAGCATACCCAACAACATATTCGGTCTAAGCTCTCTTAAATATCTATATATGTGGAACTGTCACAAAGCGTTTACCAATCAAAGGGATTTGAAGAACCCGGATATAAGTGAAAGTGCATCACATTCTCGATCATATGTGTTGTCATCCTTGCATAGCTTATATTGTTTGCGTGAAGTTAACATTAGCTTTTGCCGTCTAAGCCAAGTGTCATATGCAATTGAATGTTTATATTGGCTAGAAATATTAAACTTAGGGGGAAACAATTTTGTGACACTACCTAGCCTGAGAAAGCTGTCCAAACTTGTATATTTAAATTTGGAGCATTGCAAGTTGTTGGAATCTTTGCCTCAACTTCCTTTTCCTACCAATATTGGGGAGGATCATCGTGAGAACAACAACAAGTTTCATGACCTTTTTACTAGAAAAGTTACACAATTGGTCATTTTCAACTGTCCAAAATTAGGTGAAAGGGAACGTTGCAGTAGCATGGCATTTTCATGGATGATACAATTCATCCAGGCATACCAACACTTTTACCCTGCGTCCTTATTTGAAGGGATTCATATTGTTACTCCAGGAAGTGAAATACCAAGTTGGATTAATAATCAGAGCGTGGGTAGTTCAATACCAATAGACAGATCTCCTATTATGCATGACAATAACAATAATATCATTGGCTTTGTATGTTGTGCAGTGTTTTCCGTGGCACCTAATCAAGAGATCCTTCCGTGGATAGCCGATATAAAATTGGTTATTGATTCTCTTTCTTCCTTTAGTGTTCCAGTAATTCTTAAGAGATATCTTATTACGACCAAATCAAGTCATCTATGGATAATCTACCTCTCTAGAGAGTCCTATGATAAATTTGAAAAAATCAGTTGTTACATTGTTGGGGGTGAAGATTTGGGTATGGAGGTGAACAGTTGTGGATATCGTTGGGTATGTAAACAAGACCTACAAGAGTTCAATTTAACAATGATGAATCACAAAATATCCTTGGCTCCGAAGTGTAAGATTATGGCAATTGAACAACCAGAACAAGAAGGTCATGAAGAGTCTCAACCTGACACGTTTGGATTTGTAAAATGTAACAGAAGAAGTGCAGGAGGAACAAACTTCCCCAGGTTTCAATTTATTATACCAAAGAAAGCGATCAAGTTGAAGAGAAATAAATCTCGAACCTCCATATCAGCCACAGAAACAGAAGTATCCGCGGAGGCACCGGATTCACCTGTTGCAGATGAAGTTTCTACTGAATCTCAACAGAAAAAAATCTCGAACCTCCATATCATTGGTCGATTCATTGGTCGGTTCCTCAGCAACTGTTGCCAACAAGGTAACACGGATACGGACACGGACACCGTAGATTCAGATGCTGAAAGTTTGGTTTCTCAGGAAGATTCAGATGCTGTAATTTCAATTATTGAAGAAGCTATTCAGACAGATATTGCAACATGCAATGTCGAAACTGACTTACCAGTTGGTCGGTTCCTCGACAACTGTTGCCAACAAGGTAGCACGGATACGGACACGGACATCAGATACGACACAGACACTGTAAACTCAGATGCTGAAAGTTTAGTTTCTGAAGAAGACTTGGATGCTGTAAACAATTACCTCAAATGCACCAGCTCCTCAAGAAGGAGAAGGTGA 3714 0.3772 MASSSNSSIAMVTSRRRNHYDVFITFRGDDTRNNFTGYLLDALKTNGIYAFRDDTNLQKGESIGPELLRAIEGSQVFVAVFSRNYASSTWCLQELEKICECVHVSRKHILPVFYDVDPSEVRKQSGIYGEAFTIHEQTFQQDSQMVSRWREALKQVGSIAGWDLCDKPQSAEIRMIVQTIMNILECKSSWVSKDLVAINSPIEALQSHLHLDSVDGVRAIGICGMGGIGKTTLSMALYDQISHRFSGSCFIEDVAKKFRLHDGPLDAQKEILLQTVGIEDHHICNRHRATNLIQSRLRRERALLILDNVDRVEQLEKIGVHRECLGVGSRIIIISRDEHILEEYGVDVVYKVPLLDWNEAHMLFCRKAFKEEKIIMRNYESLVYEILDYANGLPLAIKVLGSFLFGRNVTEWKSALTRLRESPDNDVMDVLQLSFDGLKETEKEIFLDIACFFNRKSEKYAKNILNCCRFHADIGLRVLIDKSLMNINGQNLEMHSLLEELGRKIVQNSSSKEPRKWSRLWSTEQLYNVMLENMEKHVKALVLNDEEVGLNVEHLSKMSNLRLLIIMWGVNISGSLLSLSNKLRYVQWTGYPFKYLPSNFHPNELVELILHSSNIKQLWRKKKYLPNLRGLDLRYSKKLVKIVDFGEFPNLEWLNLEGCISLLELDPSIGLLRNLVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHKAFTNQRDLKNPDISESASHSRSYVLSSLHSLYCLREVNISFCRLSQVSYAIECLYWLEILNLGGNNFVTLPSLRKLSKLVYLNLEHCKLLESLPQLPFPTNIGEDHRENNNKFHDLFTRKVTQLVIFNCPKLGERERCSSMAFSWMIQFIQAYQHFYPASLFEGIHIVTPGSEIPSWINNQSVGSSIPIDRSPIMHDNNNNIIGFVCCAVFSVAPNQEILPWIADIKLVIDSLSSFSVPVILKRYLITTKSSHLWIIYLSRESYDKFEKISCYIVGGEDLGMEVNSCGYRWVCKQDLQEFNLTMMNHKISLAPKCKIMAIEQPEQEGHEESQPDTFGFVKCNRRSAGGTNFPRFQFIIPKKAIKLKRNKSRTSISATETEVSAEAPDSPVADEVSTESQQKKISNLHIIGRFIGRFLSNCCQQGNTDTDTDTVDSDAESLVSQEDSDAVISIIEEAIQTDIATCNVETDLPVGRFLDNCCQQGSTDTDTDIRYDTDTVNSDAESLVSEEDLDAVNNYLKCTSSSRRRR* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2291 1237 Gene3D - 355 439 IPR042197 -
Mtr6g2291 1237 Pfam C-JID domain 879 1006 IPR045344 -
Mtr6g2291 1237 Gene3D - 14 189 IPR035897 -
Mtr6g2291 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Mtr6g2291 1237 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr6g2291 1237 ProSiteProfiles Leucine-rich repeat profile. 765 786 IPR001611 GO:0005515
Mtr6g2291 1237 Gene3D Ribonuclease Inhibitor 719 825 IPR032675 -
Mtr6g2291 1237 Gene3D Ribonuclease Inhibitor 490 718 IPR032675 -
Mtr6g2291 1237 SUPERFAMILY L domain-like 555 811 - -
Mtr6g2291 1237 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Mtr6g2291 1237 Gene3D - 190 349 IPR027417 -
Mtr6g2291 1237 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2291 1237 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g2291 1237 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g2291 1237 PRINTS Disease resistance protein signature 783 799 - -
Mtr6g2291 1237 Pfam TIR domain 20 180 IPR000157 GO:0007165
Mtr6g2291 1237 Pfam NB-ARC domain 201 423 IPR002182 GO:0043531
Mtr6g2291 1237 SUPERFAMILY "Winged helix" DNA-binding domain 426 529 IPR036390 -
Mtr6g2291 1237 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 927 IPR044974 GO:0006952
Mtr6g2291 1237 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g2291 1237 MobiDBLite consensus disorder prediction 1083 1106 - -
Mtr6g2291 1237 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2291 Mtr-Chr6 40700769 40733274 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2291 20 803 WRKY Transcription Factor Family AT4G12020 30.703 2.18e-80 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2291 - - mtr:MTR_6g087320 2401.71