Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2289 ATGGCTAGCAGCAGCAACTCGTCTACGGCTCTGGTGCCTTTGCCAAGGAGAAATTGTTATGACGTGTTTGTCACCTTCAGAGGTGAAGATACTCGCAACAATTTCACTAATTTTCTTTTTGCTGCCCTTGAAAGAAAAGGTATTTATGCTTTCAGGGATGACACAAATCTTCCAAAGGGTGAATCCATAGGACCTGAGCTCCTTCGAACAATCGAAGGATCTCAGGTTTTCGTTGCTGTCTTATCAAGAAACTATGCTTCTTCAACATGGTGCCTGCAAGAATTAGAGAAGATTTGTGAATGCATCAAGGGATCTGGAAAATATGTTCTTCCTATTTTCTATGGTGTCGATCCTTCTGAGGTAAAAAAGCAAAGTGGGATTTATTGGGACGATTTTGCCAAACATGAACAAAGATTCAAACAAGACCCTCATAAGGTGTCAAGATGGAGGGAAGCTCTAAACCAAGTGGGGAGTATCGCTGGTTGGGATCTACGTGATAAGCAGCAATCCGTAGAGGTTGAAAAGATTGTTCAAACGATCTTGAATATATTGAAGTGCAAATCTTCATTCGTTTCAAAAGATTTAGTTGGGATAAATTCTCGTACAGAAGCATTAAAACATCAGTTACTTTTGAATTCGGTTGATGGTGTTCGTGTTATAGGAATTTGGGGGATGGGAGGAATAGGGAAGACAACCCTTGCTATGAATTTATATGGCCAAATCTGTCATCGATTTGATGCATCCTGTTTCATTGATGATGTAAGCAAAATTTTTAGATTACATGATGGTCCAATTGATGCACAAAAGCAAATCCTACATCAAACTCTTGGCATAGAACACCATCAAATATGCAATCATTATAGTGCAACTGATTTGATAAGACATAGGCTAAGTCGTGAAAAGACCCTTCTAATTCTTGATAATGTGGATCAAGTTGAACAATTGGAAAGAATAGGTGTGCATCGTGAATGGTTAGGTGCAGGTAGTAGAATCGTTATCATTTCAAGAGATGAACATATATTGAAAGAATATAAAGTGGATGTAGTTTACAAAGTTCCACTGTTGGATTGGACCGAGTCTCACAAGTTATTTTGTCAAAAAGCTTTCAAACTTGAGAAAATTATCATGAAAAATTATCAAAATTTGGCATATGAGATACTGAATTACGCTAATGGTCTACCACTAGCAATTACAGTATTGGGCTCATTTTTGTCTGGTCGTAATGTGACTGAATGGAAGAGTGCATTGGCTAGACTGAGACAAAGTCCAAATAAAGATGTCATGGATGTGCTTCAATTAAGTTATGATGGGCTAGAGGAAACGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCAACTCTCGGAATGAGAAAATTATTAAAAACATTCTAAATTGTTGTGGATTTCACGCTGATATTGGATTTATAGTTCTCATTGATAAATCACTAATAACCATTCATGGTTCAATTGTTGAAATGCATTCTTTGTTGGAAGAGTTAGGCAGAAAAATTGTGCAAGAAAATTCAAGCAAAGAGCAAAGAAAGTGGAGCAGGATGTGGTCCAAACAACAACTCTACAATGTTACGATGGAGAATATGGAAAAACATGTTGAAGCCGTAGTTTTTTTTGGTGGGATTGATAAGAATGTTGAATTCTTGTCAACAATGAGTAATCTTAGATTGCTAATCATCAGGCACGATGAATACTATATGATAAACAACTACGAACTTGTGATGTTGAAGCCATATAGTCTATCAAACAAATTACGATATGTTCAATGGACTGGATATCCTTTCAAGTATCTGCCATCAAGTTTTCACCCTGCTGAACTTGTAGAATTGATTTTGGTGAGAAGCTGCATTAAACAACTATGGAAAAACAAGAAGCATCTTCCCAATTTGAGAAGATTGGATCTAAGTGACTCCAAGAAGCTAGAAAAGATAGAAGATTTTGGACAGTTTCCTAATCTTGAGTGGTTAAATTTGGAAAGATGTATAAAACTTGTGGAGTTGGATCCATCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAATTTAGAGCGTTGCTATAATCTAGTAAGCATACCCAACAACATATTCGGTCTTAGCTCTCTTAAATATCTAAATATGTCTGGATGTTCCAAATTAATGAAGCCTGGTATATCCTCAGAAAAGAAGAATAAGCATGATATAAGGGAAAGTACATCACATTGCCGATCAACGTCCTCTGTCTTCAAATTGTTCATTTTTCCTAACAATGCATCATTTTCGGCTCCCGTAACACACACATATAAGTTGCCTTGCTTTCGTATTTTATATTGTTTGCGTAACATTGACATTAGCTTTTGCCATCTAAGCCATGTTCCTGATGCAATTGAATGTTTACATCGGCTAGAAAGATTAAATTTAGGGGGAAATAATTTTGTGACACTACCTAGCATGAGGAAGCTTTCCAGACTTGTATATTTAAATTTGGAGCATTGCAAGTTGTTGGAATCGTTGCCTCAACTTCCTTTTCCAAGCACTATTGGGCCGGATTATCATGAGAACAACGAATATTATTGGACTAAAGGATTGGTCATTTTCAACTGTCCAAAATTGGGTGAGAGGGAATGTTGTAGTAGCATAACATTTTCATGGATGAAACAATTCATTCAGGCAAACCAACAATCCTACGGTCCGTATTTGTATGAGCTTCAAATTGTTACTCCAGGAAGTGAAATACCAAGCTGGATCAACAATCAGAGCATGGGTGGTTCAATACTAATAGACGAATCTCCTGTTATACATGACAATAAGAATAATATCATTGGCTTTGTATTTTGTGCAGTATTTTGCATGGCACCTCAAGATCAAACAATGATAGAATGTCTTCCATTGTCTGTTTATATGAAAATGGGTGATGAGAGGAACTGTAGAAAGTTTCCGGTAATAATCGATAGAGATCTTATTCCGACCAAATCAAGTCACCTATGGCTAGTCTACTTTCCCCGAGAGTACTATGATGTTTTTGGAACTATCCGCATTTATTGTACCAGGTATGGACGTCAAGTTGTGGGTATGGATGTGAAGTGTTGCGGGTATCGTTGGGTATGTAAACAAAACTTACAAGAGTTCAACTTAACAATGATGAATCATGAAAAATCCTTGGCTTCGAAATGTAAGATTTTGGCAATTGAAGATGAGACACAACCACAACCACAATCAGAACAAGAATCATTCACCTCACAAGTCATAACTACTTCACAGAGAAGAAAGTCAACAAGTGATAACAAGTCAAACGCAAAAACAATCTCTGTTTTCAACCGCAAGCAGAGATGTAACAGAAGAAAACGATCAAGTTCCCACTCCTGA 3357 0.3682 MASSSNSSTALVPLPRRNCYDVFVTFRGEDTRNNFTNFLFAALERKGIYAFRDDTNLPKGESIGPELLRTIEGSQVFVAVLSRNYASSTWCLQELEKICECIKGSGKYVLPIFYGVDPSEVKKQSGIYWDDFAKHEQRFKQDPHKVSRWREALNQVGSIAGWDLRDKQQSVEVEKIVQTILNILKCKSSFVSKDLVGINSRTEALKHQLLLNSVDGVRVIGIWGMGGIGKTTLAMNLYGQICHRFDASCFIDDVSKIFRLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRHRLSREKTLLILDNVDQVEQLERIGVHREWLGAGSRIVIISRDEHILKEYKVDVVYKVPLLDWTESHKLFCQKAFKLEKIIMKNYQNLAYEILNYANGLPLAITVLGSFLSGRNVTEWKSALARLRQSPNKDVMDVLQLSYDGLEETEKEIFLDIACFFNSRNEKIIKNILNCCGFHADIGFIVLIDKSLITIHGSIVEMHSLLEELGRKIVQENSSKEQRKWSRMWSKQQLYNVTMENMEKHVEAVVFFGGIDKNVEFLSTMSNLRLLIIRHDEYYMINNYELVMLKPYSLSNKLRYVQWTGYPFKYLPSSFHPAELVELILVRSCIKQLWKNKKHLPNLRRLDLSDSKKLEKIEDFGQFPNLEWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKLMKPGISSEKKNKHDIRESTSHCRSTSSVFKLFIFPNNASFSAPVTHTYKLPCFRILYCLRNIDISFCHLSHVPDAIECLHRLERLNLGGNNFVTLPSMRKLSRLVYLNLEHCKLLESLPQLPFPSTIGPDYHENNEYYWTKGLVIFNCPKLGERECCSSITFSWMKQFIQANQQSYGPYLYELQIVTPGSEIPSWINNQSMGGSILIDESPVIHDNKNNIIGFVFCAVFCMAPQDQTMIECLPLSVYMKMGDERNCRKFPVIIDRDLIPTKSSHLWLVYFPREYYDVFGTIRIYCTRYGRQVVGMDVKCCGYRWVCKQNLQEFNLTMMNHEKSLASKCKILAIEDETQPQPQSEQESFTSQVITTSQRRKSTSDNKSNAKTISVFNRKQRCNRRKRSSSHS* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2289 1118 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 1019 IPR044974 GO:0006952
Mtr6g2289 1118 ProSiteProfiles Leucine-rich repeat profile. 798 819 IPR001611 GO:0005515
Mtr6g2289 1118 Gene3D - 355 439 IPR042197 -
Mtr6g2289 1118 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Mtr6g2289 1118 Gene3D - 1 157 IPR035897 -
Mtr6g2289 1118 Gene3D - 168 350 IPR027417 -
Mtr6g2289 1118 Pfam C-JID domain 905 996 IPR045344 -
Mtr6g2289 1118 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 162 IPR035897 -
Mtr6g2289 1118 MobiDBLite consensus disorder prediction 1064 1118 - -
Mtr6g2289 1118 Gene3D Ribonuclease Inhibitor 493 739 IPR032675 -
Mtr6g2289 1118 Gene3D Ribonuclease Inhibitor 740 889 IPR032675 -
Mtr6g2289 1118 Pfam TIR domain 20 182 IPR000157 GO:0007165
Mtr6g2289 1118 SUPERFAMILY "Winged helix" DNA-binding domain 426 527 IPR036390 -
Mtr6g2289 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr6g2289 1118 MobiDBLite consensus disorder prediction 1064 1103 - -
Mtr6g2289 1118 Pfam NB-ARC domain 202 435 IPR002182 GO:0043531
Mtr6g2289 1118 SUPERFAMILY L domain-like 553 842 - -
Mtr6g2289 1118 SMART till_3 19 159 IPR000157 GO:0007165
Mtr6g2289 1118 Pfam Leucine rich repeat 776 831 IPR001611 GO:0005515
Mtr6g2289 1118 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 1019 - -
Mtr6g2289 1118 MobiDBLite consensus disorder prediction 1104 1118 - -
Mtr6g2289 1118 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2289 1118 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g2289 1118 PRINTS Disease resistance protein signature 390 404 - -
Mtr6g2289 1118 PRINTS Disease resistance protein signature 630 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2289 Mtr-Chr6 40684930 40694629 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2289 13 844 WRKY Transcription Factor Family AT4G12020 30.831 1.48e-84 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2289 - - mtr:MTR_6g488300 1607.81