Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2269 ATGTATAAACCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAAGTATAAGGAGATATAGGTCAAATTCTCACAAAATGAAGGATAAGACAAAGAGCCGAAAGCCGGCCGAAAATTTAGAGACAAATAAACAAGACAAAGAAGAGAAGGTATCAAAAGGTTCTACAGAAAGAGATTTTGATCCATCTTCTTTGCAGCTTGTGGAGGTATCTAGAGGTGCCGCAAAGTTGAACAACATGATTGAGTCGTGGTCTAGAGGTGTGAGGTACGATGGAAAATCCGATGATATCGCAAAGGATTTGTTAAAAGGTGCTCTTGATTTGCAAGAGTCTCTAGAGATGCTTCGACAGGTGCAAGAAGCTTCGAATAGTATGAGTCGATCGAAGAGAAGACAAGAGGAGAAACATGAAAGAAGTAAAATTGATGCACATGTGAATGATGGAAATAGATCAACACATTCTAATCAATTTTTTGAACACAATTCAGCTTATGGTTCTTCAAGTAGTTGTAGAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTCGACAAAATCTATTCCAAAGCACAAGTACTTCTGAAGGATTGGATTCAGCTTCAGCAGCATTCCCTTCTACAAGCTCAAGCCAATCATCTGTTGTTTGGTATGACAAACTTTCTGATTCTTCGTGTTCACCGACTTTTCCAAGGAAGGAAAAAAGTACCAATCTTGTTGCAAAGTTGATGGGATTAGAACAATCCCCTTCAAGAACATTTCCATCTGTCATGCAAAAACAGTCTGAGAATCAAAAGATTGTGAATCAGAAGAGACCTGTGTTCGAGATTGACACACCGAAGTTAAGAAAGCATAGTTCAATATTTGAGAATCCAGAAAGAGAGAAGACACTAAGGGAAATTCTTGAAACTACTCATTTCAATGGATTGTTAAAGTGTAGTCCTATTAGAGAGCACAAGCTTCATAATCATGTCAATCATTCAAATGATCTTCATTACAAACAGTTTGATGATTTACCACCGATTGTACTCATGAAACCTCGGCGCGCTTCGTATCAGGAATTCGTAGAAACGTACGAGCCGGTTCCTCGAGAAGAGTTTTCCTTTAGAAATCCAAAAGCAAAAGGAGCTCCTTCAAAAACCTTCAAACCAAGGGAGGGTTCAACTACCAATATGAGAAAAGAGACGATGGAAGAAAGTCTATCCAAAAGGTTTATCAAAGAGGAGAGATCGAAGCGCGTCAACGAGTTTTTGGAATATGATGTGAAAGAAATCAAGGCTGTTGAAAACAAGAAGGTTCAAAAAGCTAGTCAAAGATCACAGGCAAGTGAAACAGTTGATGAAAAAGCTAAGGTAAAGAACATTACAATTCTCAGAAAACCAATACAAAAGGAGGTTTCAAAAGCTAAAGTTGTAGCGAAAGCTCAAGATCAAGGCGAAATCAGGTCTAGTAGTGAAAAGTTGAAAAAGCCGCGAAGTGTGTCGAGGATTGAGAAGAATGAGATTCCATCTAGAAAGAGCACTTCTTCAAATTCAAATACTGCCATCACAAAACCAAAGACACAAAAGGTTAATAGTTCAAAGGAGTTGAGAAAGAGTCAGATGAAGAAGCAAATATCTGTTGATTTGCCGGAAGCAGCTAAATCGATTGATGAAAAATTAAAGCAAGAAGAAGGAATGAGTATCGATGTTTCTTGTAAAGATGATTGCGCTGAGATTAAAATAATCACTACAGTAACAGAAGATCTCATCATGGAGGATGAAGTAGACACCTATGCAAATAAGACTCGAGATAATTGCGAGGAGGGCCAGAATTCTTCGGTTGATGATGTTTTGATGCTAAATTATGAACATGAAAATGATACCATCCCTGCCGAGGAAGCTTGTGACACCACCGGCGTCAGTGAAACTTGTTTCAAGCACGACACAGACATTGCTGAAACCACCTGTATCAGTGGAACCGATTTCGAGCCAGACAAAGACACTTCTGAGCTGAAATATTTGCTTCTAACTAGCAAATCATTTATTGACCATGCAGATGAGTTTCTCAATCTTGATATCGATTATCCTAAGATCCTACCAAAGATTGAAACTAATGGAATAGCCAATACAAGACTCTATTTGGATTGCGCGAACGAACTCGCCGAGAGAAAAAGCCTTCAAGAGTCATCACAATTAGTTCACCCCTTATTGCTAACTTGTGTAGGGAATTCAAGATTGCAAATCTCTTTGAGCAGCTTGGTTGAAGAAGTTGACAATGCAATTGAGAAGCTTACATCTTACAGTGAAAATTCTGAGACTAAACTTATTTTGGATAATATTTGTGCAATGTTGGAGAGAGATATGAAGTGCAACAATAGATTGATAAATGGAATGTGGAACTGTGGTTGGAGGCATGGATTTTCTTGTGATGAAGCTGAACAAGCGGTTAATGAAGTAGAAAACATGATTTTAGGTGGATTAATTGAGGAGATTATTGTAAATTTATGA 2496 0.3814 MYKPFVTCDDPKGVVECGSIRRYRSNSHKMKDKTKSRKPAENLETNKQDKEEKVSKGSTERDFDPSSLQLVEVSRGAAKLNNMIESWSRGVRYDGKSDDIAKDLLKGALDLQESLEMLRQVQEASNSMSRSKRRQEEKHERSKIDAHVNDGNRSTHSNQFFEHNSAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSASAAFPSTSSSQSSVVWYDKLSDSSCSPTFPRKEKSTNLVAKLMGLEQSPSRTFPSVMQKQSENQKIVNQKRPVFEIDTPKLRKHSSIFENPEREKTLREILETTHFNGLLKCSPIREHKLHNHVNHSNDLHYKQFDDLPPIVLMKPRRASYQEFVETYEPVPREEFSFRNPKAKGAPSKTFKPREGSTTNMRKETMEESLSKRFIKEERSKRVNEFLEYDVKEIKAVENKKVQKASQRSQASETVDEKAKVKNITILRKPIQKEVSKAKVVAKAQDQGEIRSSSEKLKKPRSVSRIEKNEIPSRKSTSSNSNTAITKPKTQKVNSSKELRKSQMKKQISVDLPEAAKSIDEKLKQEEGMSIDVSCKDDCAEIKIITTVTEDLIMEDEVDTYANKTRDNCEEGQNSSVDDVLMLNYEHENDTIPAEEACDTTGVSETCFKHDTDIAETTCISGTDFEPDKDTSELKYLLLTSKSFIDHADEFLNLDIDYPKILPKIETNGIANTRLYLDCANELAERKSLQESSQLVHPLLLTCVGNSRLQISLSSLVEEVDNAIEKLTSYSENSETKLILDNICAMLERDMKCNNRLINGMWNCGWRHGFSCDEAEQAVNEVENMILGGLIEEIIVNL* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2269 831 PANTHER OS01G0228800 PROTEIN-RELATED 1 829 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 121 157 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 371 395 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 21 67 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 475 541 - -
Mtr6g2269 831 Coils Coil 739 766 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 506 525 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 526 540 - -
Mtr6g2269 831 PANTHER OS01G0228800 PROTEIN 1 829 - -
Mtr6g2269 831 Coils Coil 40 60 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 34 60 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 482 505 - -
Mtr6g2269 831 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2269 Mtr-Chr6 40453155 40457719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2269 659 828 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.768 6.67e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2269 - - gmx:102663636 944.495