Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2261 ATGGCCACCACCACCACCACCACCACCACCATCTTCTCCATCTTCCTCCTCTTCCTGGCCCTATTCAAAACCCTAACCCTAAAAAACCCCTCAATTTCACCCCCTTCACCTTCATCTCCACCAAATTACATAATCGGATTCACCCAATACAAACCCTCAAGCCACCACCTTTCTTACCTTCAATCCAATCTCCAATCAAAAGGGTGGCAATGGATCAACCGTAAAAATCCAGCTTCAAAGTATCCAACAGATTTCGGCGTTGTTTCGGTTGAAGAATTGGGGGTAATTGATGAAATTAAGAAATTAGGGTTGGTTAAGTATGTGAGTTTGGATATGAGTTATAAGAGGGGTTTGTTGAATGATAAAGTTGGTTCCTTTTTTGATGGGGGTAAAAAGCCTGGGAAGATTTTTACAAAGATGTCTTTTTGTGAGGCTGATGAACATGGACAAGAACAAGATAGTGTGAATCTTAATGGTTCTGTTAACTTGAGGAGACAATTGTTGATTCAGAGATCACAAGTTACTTCCATGTTTGGAGCGGAAGATCTTTGGACGAGAGGGCACACTGGTGCAAAGGTCAAAATGGCCATATTTGATACTGGCATTCGATCTGATCACCCACATTTCCGTAACATTAAGGAGCGTACAAATTGGACCAACGAGGATACGTTGAATGACAATCTAGGACACGGGACATTTGTTGCTGGTGTTGTTGCCGGTATGGATGCTGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGCGTGTTTACTGATGCACAGGTGTCATATACCTCTTGGTTCCTTGATGCATTTAACTATGCAATTGCAACCGATATGGATGTGCTCAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTAGAAAAGATATGGGAGATAACAGCCAATAATATAATCATGGTTTCTGCAATTGGAAACGATGGACCACTTTATGGAACTTTGAATAATCCAGCAGATCAAAGTGATGTGATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCTTCCTTTTCCTCGCGTGGCATGAGTACCTGGGAACTTCCTCATGGTTATGGTCGTGTGAAGCCAGACGTAGTTGCATATGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGAACCAGTGTTGCAAGTCCTGTAGTTGCCGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCAGAATCTGATCGCAAAAATATCTTAAACCCGGCAAGCATGAAACAAGCATTAGTCGAGGGTGCTGCAAAGCTTGCTGGACCTAACATGTACGAGCAGGGCGCTGGCAGAGTTGATCTGTTAGAATCATATGAGATTCTTAAGAGCTACAAACCTAGGGCCAGCATCTTTCCCAGTCTTCTTGATTACACGGATTGTCCTTATTCATGGCCCTTTTGCCGCCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCAGCATTTTAAATGGTATGGGTGTTATTGGCTATGTCGAAAGTCCACCAATATGGCATCCTTTCGAAGAAGTAGGGAATCTTCTAAGCATTCATTTTACGTATTCTGAAGTCATTTGGCCTTGGACTGGTTATTTGGCCATTTATATGCAAATCAAGGAAGAAGGTGCACAATTTTCTGGTAACATTGAAGGTAATGTGACTCTTAGGGTTTCAAGCCCTCCAGCTCAAGGAGAGAACCGCCCTCGAATTAGCACTTGTGTGCTTCAATTGAAGTTAAAAGTCGTGCCAACACCGCCGCGAGCAAAACGAATTTTGTGGGATCAGTTTCACAATATTAAATACCCCCCAGGTTATATTCCTAGAGATTCCTTGGATGTTCGTAATGACATTCTTGACTGGCACGGGGATCATCTACATACAAATTTTCATATAATGTTCAACATGTTACGAGATGCTGATTACTATGTCGAAACACTCGGTTCTCCTCTTACATGCTTTGATGCTCGACAGTATGGAACACTTCTTTTGGTGGATCTTGAAGAAGAGTACTTTCCCGAGGAGATTGAAAAGTTGAGAGACGATGTTATAAATACTGGATTGGGATTAGCAGTCTTTGCTGAGTGGTACAATGTAGATACAATGGTAAAGATGAGATTCTTCGATGATAATACACGGAGTTGGTGGACCCCTGTCACTGGAGGTGCTAATAATCCTGCACTTAATGATCTTTTGGCTCCATTTGGAATTGCTTTTGGAGATAAGATTCTGAGCGGTGATTTTTCACTTTTCGGTGAGGAGAACAGATACGCATCTGGAACAGACATAGTGAGGTTTCCAAGGGGTGGTTATGTACATAGCTTTCCTTTCTCAGATAGTTCAGAAAGTGGAGCCACTCAGAATGTGTTGCTTACTTCTAGCACCACCAAGGCAGATTCTCCGATTCTTGGCCTTACAGTGATGGGTGAAGGTCGCATTGCCGTGTACGGTGACTCCAACTGTTTGGACAGCAGTCATATGGTGACAAACTGTTTTACGCTTTTGAGGAAAATGCTTGATTTTACTAGCAAGAATGTTAGAGATCCAATACTTTTCTCTAATTCAAATAAACAAGACGCTCCCTTGTATGAAGACGACAACCAGTTGCCATCTCGCAGAACTGATGTAAATTTCTCCTCATATTCAGCTGTTACAGGGAAGGAATTGATCTGCAAGACCGACTCAAGGTTCGAAATATGGGGAACCAAGGGTTACAGTTTGCAAGTCAGAGGAAGAAACAGAAGATTGCCTGGTTATCCTGTCATTGATCTGGGTAATGCTTTCAATTCAACATTTGATGCTTCCAATGTTATGCGTCGGAAGGTAACTTTGAGAAATAAGGATGATTCTCTTGGGAACAGATATTTGGGCTTGTTCTATGGAGACGAGCCTGATGCACCTATGCTGGTTGGTAGTCACTGGCTTATTCCTGTGGCTGTTGCAGCAACTGGTATTTTACTACTGAGTTTTTGGCGCATTCGGCAAAAGAGACGTCGAAGAAGGAAAGGATCATCAAGCACCGGTAGATTGACCAATTTATAG 3081 0.4255 MATTTTTTTTIFSIFLLFLALFKTLTLKNPSISPPSPSSPPNYIIGFTQYKPSSHHLSYLQSNLQSKGWQWINRKNPASKYPTDFGVVSVEELGVIDEIKKLGLVKYVSLDMSYKRGLLNDKVGSFFDGGKKPGKIFTKMSFCEADEHGQEQDSVNLNGSVNLRRQLLIQRSQVTSMFGAEDLWTRGHTGAKVKMAIFDTGIRSDHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGMDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPESDRKNILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYKPRASIFPSLLDYTDCPYSWPFCRQPLYAGAMPVIFNASILNGMGVIGYVESPPIWHPFEEVGNLLSIHFTYSEVIWPWTGYLAIYMQIKEEGAQFSGNIEGNVTLRVSSPPAQGENRPRISTCVLQLKLKVVPTPPRAKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDADYYVETLGSPLTCFDARQYGTLLLVDLEEEYFPEEIEKLRDDVINTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANNPALNDLLAPFGIAFGDKILSGDFSLFGEENRYASGTDIVRFPRGGYVHSFPFSDSSESGATQNVLLTSSTTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFTLLRKMLDFTSKNVRDPILFSNSNKQDAPLYEDDNQLPSRRTDVNFSSYSAVTGKELICKTDSRFEIWGTKGYSLQVRGRNRRLPGYPVIDLGNAFNSTFDASNVMRRKVTLRNKDDSLGNRYLGLFYGDEPDAPMLVGSHWLIPVAVAATGILLLSFWRIRQKRRRRRKGSSSTGRLTNL* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2261 1026 PRINTS Subtilisin serine protease family (S8) signature 190 209 IPR015500 -
Mtr6g2261 1026 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Mtr6g2261 1026 PRINTS Subtilisin serine protease family (S8) signature 393 409 IPR015500 -
Mtr6g2261 1026 ProSiteProfiles Serine proteases, subtilase domain profile. 166 460 - -
Mtr6g2261 1026 PANTHER PEPTIDASE S8 39 857 - -
Mtr6g2261 1026 Pfam Subtilase family 191 441 IPR000209 GO:0006508|GO:0008236
Mtr6g2261 1026 SUPERFAMILY Subtilisin-like 173 453 IPR036852 GO:0004252|GO:0006508
Mtr6g2261 1026 Gene3D Peptidase S8/S53 domain 162 456 IPR036852 GO:0004252|GO:0006508
Mtr6g2261 1026 CDD Peptidases_S8_SKI-1_like 184 440 IPR034185 -
Mtr6g2261 1026 ProSitePatterns Serine proteases, subtilase family, serine active site. 394 404 IPR023828 -
Mtr6g2261 1026 ProSitePatterns Serine proteases, subtilase family, histidine active site. 230 240 IPR022398 -
Mtr6g2261 1026 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 39 857 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2261 264 1004 Subtilisin-like Serine Gene Family AT5G19660 79.412 0.0 1241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2261 K08653 - gmx:100819188 1749.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2261 6 40336713 40343610 Mtr6g2261 6 40336713 40343610 ECH