Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2240 ATGCCGCGATCAAGTTCAGGAATTCATCACCAGCGTCAAAACTCTGATAATTTCATCCTTGACGCAAATTATCATGGAAGATGGTTTCATCCTTCATCTTTTGCGCAGGAATATGGAACTCGATCTTCGAGTTTGAGGAAGAATGACGATGATCGTTTGTTTACTAGTGGATTGCTTGACTTGCATTCGTTTGATACTGAGCTTTTACCAGAGGGACAGTATTTTGATGACTCTGAGCCGATTTTCCCGGGGAACAAACCCGCGTCAAGGTCTCGGGGCTTGCATGAGAGCAATGTTCTTAGAAGTTTATCAGCCGATAAGGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGCGGTTAGAAAGAGACCACTAAATAAAAAGGAAATAGCGAAGAAAGAGGAAGATATTATTACCATAGATTCAAATTTTCTCACAGTTCATGAAAGAAAACTCAAGGTTGACTTGACAGAATACGTCGAGAAACATGAGTTCTTTTTTGATGCCGTGCTAGATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCCATAGTTCCATTGATATTCCAAAAAACAAAAGCAACTTGCTTTGCATATGGCCAAACTGGGAGTGGGAAGACGTATACTATGCAACCATTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATGTACCGCACATACCAGAGCCAAGGTTTCCAATTATACGTTAGTTTTTTCGAAATATATGGGGGAAAACTGTTTGATCTCCTCAATGATAGAAAAAAACTTTTCATGAGGGAGGATGGTAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTTTTTGAAGTTGAAACGATCAAACAATTTATTGAGAAAGGAAATGCTACAAGAAGTACTGGTACAACCGGTGCAAATGAGGAATCGTCTCGATCTCATGCTATACTTCAACTTGTTATCAAGAGATCAGCTGATGGGTCTGAATCAAAGCCAGCTCGAGTTATAGGCAAACTATCTTTCATAGATTTGGCTGGAAGTGAACGCGGTGCAGATACTACTGATAATGATAAGCAGACCAGGATCGAAGGTGCTGAAATTAATAAAAGCTTACTTGCACTGAAAGAATGCATTAGAGCCCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACAGAAGTTCTGCGAGACTCTTTCGTTGGTGATTCACGGACTGTAATGATATCTTGCATTTCTCCAAGCTCAGGTTCATGTGAGCATACTCTCAACACATTGAGATATGCTGACAGGGTAAAGAGCCTTTCAAAGGGTAATAGCTCCAGAAGGGATCCCCTTTCTTCATCAAACCTTAGAGAGTCAACTGTATTACCGGTTTTACCAAATGATAATACCTTTGAGGATGAAATAACATATGCTTCCAGTGAGAGGAATCAATTTGGATGGTCTAAACAGCCTGAAAGAGAACCCTCACTTCCAACTAATGTGGACCGTGTTGGAAGTGGTAGGATGGAGGGGAATTTGGCACCATCTTTGTACTCTGACCAACAAAGGAGTCAACGGGGTATTCAAAATGACAGAGCTGAAAAGGAAAATGAATACCTAGCACCAACATATGTGAAAGACAGAACAAGAAAAGCGAGCAAGAGGGTGGATAACAACCAGTTATCTGCTGTGGAAGACAAAAAGAAGATAGGATCTCGTGCTAAACATGTTAATCTACCACATGTTGAGAATACACATTCTGATCCTGATGATGATTTTAATGCTCTTCTGAAGGATGAGGAAGATCTTATAACTGCCCACCGTAGACAAGTGGAGGAAACAGTAGATATTGTTAGGGAGGAGATGAATTTACTCTTTGAAGCCGACCAACCAGGAAATCAATTGGATGATTATATTTCCAAATTGAATACCATTTTAACTCAAAAGGCTGCAGGAATATTTCAATTGCAGGCGCAGTTGGCTCAATTCCAGAAACGTTTAAATGAATATTGCTGCTAA 2013 0.4014 MPRSSSGIHHQRQNSDNFILDANYHGRWFHPSSFAQEYGTRSSSLRKNDDDRLFTSGLLDLHSFDTELLPEGQYFDDSEPIFPGNKPASRSRGLHESNVLRSLSADKERANNVAKIKVAVRKRPLNKKEIAKKEEDIITIDSNFLTVHERKLKVDLTEYVEKHEFFFDAVLDEDVSNDEVYAETVEPIVPLIFQKTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMYRTYQSQGFQLYVSFFEIYGGKLFDLLNDRKKLFMREDGKQQVCIVGLQEYRVFEVETIKQFIEKGNATRSTGTTGANEESSRSHAILQLVIKRSADGSESKPARVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNLRESTVLPVLPNDNTFEDEITYASSERNQFGWSKQPEREPSLPTNVDRVGSGRMEGNLAPSLYSDQQRSQRGIQNDRAEKENEYLAPTYVKDRTRKASKRVDNNQLSAVEDKKKIGSRAKHVNLPHVENTHSDPDDDFNALLKDEEDLITAHRRQVEETVDIVREEMNLLFEADQPGNQLDDYISKLNTILTQKAAGIFQLQAQLAQFQKRLNEYCC* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2240 670 MobiDBLite consensus disorder prediction 483 529 - -
Mtr6g2240 670 PANTHER KINESIN-LIKE PROTEIN KIN-13B 10 668 - -
Mtr6g2240 670 Pfam Kinesin motor domain 121 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2240 670 SMART kinesin_4 113 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2240 670 MobiDBLite consensus disorder prediction 442 459 - -
Mtr6g2240 670 ProSiteProfiles Kinesin motor domain profile. 115 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2240 670 Gene3D Kinesin motor domain 94 441 IPR036961 -
Mtr6g2240 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 438 IPR027417 -
Mtr6g2240 670 ProSitePatterns Kinesin motor domain signature. 337 348 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr6g2240 670 CDD KISc_KIF2_like 115 436 - -
Mtr6g2240 670 PRINTS Kinesin heavy chain signature 195 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2240 670 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2240 670 PRINTS Kinesin heavy chain signature 338 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2240 670 PRINTS Kinesin heavy chain signature 388 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2240 670 PANTHER KINESIN-RELATED PROTEIN 6 10 668 - -
Mtr6g2240 670 MobiDBLite consensus disorder prediction 437 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2240 Mtr-Chr6 40061242 40067954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2240 114 438 Calmodulin-binding Proteins AT5G65930 35.224 7.14e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2240 K10393 - gmx:100775562 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2240 6 40061242 40067954 Mtr6g2240 6 40061242 40067954 ECH