Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2235 ATGTTCAAATTCCTGAAAGAAGTTGTTGGTGGATCTGGAACTGGCCTCAGAGATCTCCCATACAACATCGGCGAACCTTACCCTTCTGCTTGGGGCTCTTGGCTTCATCATCGTGGTACCTCCAAGGATGATGGTTCACCGGTTTCAATTTTTTCATTATCTGGAACCAATGCTCAGGATGGACATTTAGCTGCGGGTCGTAATGGTGTCAAGCGTCTACGAACTGTTAGGCATCCAAATATTTTGTCATTTCTTCATAGTACTGAGATTGAAACTTTTGATGGCGGTTCTTCTAAGGTTACAATTTATATTGTGACCGAACCTGTAATGCCACTTTCAGATAAGATTCAGGAGTTAGGTCTTGAAGGTACACAAAGGGATGAATATTATGCTTGGGGACTGCTTCAAATAGCGAAAGCCGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTAGCTAGTGTTGTTGTCACGCCAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGTAATGAGACATCCTCTACGCAAATGCTGCAATATGCATGGCTTGTTGCAACACAATACAAATCAACGGAGCTTGCAAAATCCGACTGGGCTGTAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGAATGGGCTGTCTAATCTATGAGCTGTTCTCTCATTTGAAGTTGAGCAAAACAGAGGACTTACGTAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTCAGTTCCACGCCTTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTAGATACAATACATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAAAAGGACACTTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAAGAGTTCCGTGTCAAGGTTCTTCCAACAATAATTAAACTCTTCGCCTCCAATGATCGGGCTGTCCGTGTCAGTCTTCTCCAACATATTGAACAATTCGGAGAGTCATTATCAGCTCAAGCTGTTGATGAACAGGTTTACCCTCATGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGTTAGTTCTGGCTCCGAAGCTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTATCGAAGTTACAGGTCGATGAAGAGGCCGCGATACGAACAAATACAACTATCTTGCTAGGAAATATTGCAAGCTACTTAAATGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTGCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCAACTATGACATCAATGAAATTGCCACTCGGATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTATTGATCAATTTTTGCAGATGGCAAAGCAACACTACGAAAAGACAAATATGGCAGAGACTACTGGGGGTGCAAGCGATGGAAGTTCATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACTCTGAAGGGCAAGCCTTCTGATCATGCTCCAGTTGCTTCTGTGAGTTCTAGTGCCCTTACACCAACATCTTCAAATGCCAGCTCAGGTATTCTAGTTGCAGACACTCCTTCAACAGCACCTATCCGTGTAAATTCCACACCAGATTTCACTGACCACCATGCCCCTACATCTCCTACATCAACGGATGGCTGGGGGGAGCTAGAGAATGGAATTGACGAGGAACCTGAAAATGACAAGGATGGGTGGGATGATTTAGAACCACTTGAAGAAACAAAGCCGACTCCAGCTCTTACTAACATTCAAGCAGCTCAAAGGCGGCCAGTTGTTCAACCTGTTTCACAGACAAAAGCTTCAAGTTCGCGACCCAAAATTCCACCAAGGTTGAGCAGGGATGAAGATGAAGATTTGTGGGGTGCCATAGCAGCTCCTGCTCCAACAACATCAAGACCTTTAAATTTGAATTCGACAACAACTAATGATGATGATCCATGGGCTGCCATTGCAGCTCCTGCGCCCACTACAAGGGCCAGGCCCTTAGCAGCTGGCAGAGGTCGGGGAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGCGGATAAACCGGACATCATCAGGAGGGATGTAA 2397 0.438 MFKFLKEVVGGSGTGLRDLPYNIGEPYPSAWGSWLHHRGTSKDDGSPVSIFSLSGTNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGSSKVTIYIVTEPVMPLSDKIQELGLEGTQRDEYYAWGLLQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFDGSNETSSTQMLQYAWLVATQYKSTELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSHLKLSKTEDLRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKVLPTIIKLFASNDRAVRVSLLQHIEQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDEEAAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFAPARGAGIMALCATSSNYDINEIATRILPNVVVLTIDPDSDVRSKAFQAIDQFLQMAKQHYEKTNMAETTGGASDGSSSIPGNASLLGWAMSSLTLKGKPSDHAPVASVSSSALTPTSSNASSGILVADTPSTAPIRVNSTPDFTDHHAPTSPTSTDGWGELENGIDEEPENDKDGWDDLEPLEETKPTPALTNIQAAQRRPVVQPVSQTKASSSRPKIPPRLSRDEDEDLWGAIAAPAPTTSRPLNLNSTTTNDDDPWAAIAAPAPTTRARPLAAGRGRGAKPAAPKLGAQRINRTSSGGM* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2235 798 MobiDBLite consensus disorder prediction 738 753 - -
Mtr6g2235 798 ProSiteProfiles HEAT repeat profile. 523 561 IPR021133 -
Mtr6g2235 798 MobiDBLite consensus disorder prediction 601 655 - -
Mtr6g2235 798 MobiDBLite consensus disorder prediction 658 675 - -
Mtr6g2235 798 PANTHER - 1 795 - -
Mtr6g2235 798 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Mtr6g2235 798 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2235 798 MobiDBLite consensus disorder prediction 685 713 - -
Mtr6g2235 798 MobiDBLite consensus disorder prediction 596 798 - -
Mtr6g2235 798 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Mtr6g2235 798 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Mtr6g2235 798 Gene3D Transferase(Phosphotransferase) domain 1 110 279 - -
Mtr6g2235 798 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 795 - -
Mtr6g2235 798 Gene3D - 282 561 IPR011989 -
Mtr6g2235 798 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2235 798 SUPERFAMILY ARM repeat 293 551 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2235 Mtr-Chr6 39975089 39988316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2235 70 291 MAP Kinase Kinase Kinase AT5G66850 26.471 2.01e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Mtr6g2235 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2235 K08876 - gmx:100792884 1287.71