Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2231 ATGGACAATCTCAGCATCAATGGAGACTCCTTTATTAAGATTCCAACTATAAAGTTTAAAAAGCTTTTTATCAATGGAGGATTCGTGGATTCAGTTTCAGGAAAAACGTTTGAGACTGTTGATCCAAGAACAGAAGAAGTGATTACAAAAATAGCAGAAGCTACCAAAGATGATGTTGATATTGCTGTGAAAGCTGCTAGAGAAGCATTTGATAATGGTCCATGGCCACGTATGCCTGGTGCTGAGAGAGCAAAGATTATGGTGAAATGGGCAACCCTAATTGAACAGAACCAAGAAGAAATAGCAGCATTGGATACAATTGATGGAGGGAAACTATACAGTTGGTGTAAGACAGTAGATGTACCCGAAGCAGCCAATATCCTACGTTACTACGCCGGTGCAGCTGATAAAGTTCACGGAGAAGTGTTCAAAACTTCTAGGAATCTTCACATGTATACTTTGATGGAACCTATTGGTGTTGTTGGACACATTATACCTTGGAATTTCCCAACTATTATGTTCTTTGCTAAGGCTGCTCCTTGTTTGGCTGCTGGTTGTACTATGGTTCTTAAGCCTGCTGAGCAAACACCTCTCTCATCACTTTTTTTTGCTCATCTTGCTAAGGAGGCTGGTATTCCAGATGGAGTGCTCAATGTACTGCCAGGATTTGGTTCAACTGCTGGAGCTGCAATAACCTCACATATGGACATTGATGCAGTCAGTTTTACAGGTTCAACCGAAACAGGCCGTCGAGTAATGCAGGCTGCAGCATTGAGTAATTTGAAGCCGGTATCACTTGAATTAGGAGGCAAGTCGCCTGTTTTAATTTTCGATGATGCTGATGTTGATAAAGCTGTTGATCTCGCTCTATTTGGAATCCTTCACAACAAGGGAGAAATATGTGTTGCATATTCTAGAGTTTTTGTCCAAGAAGGGATTTACGATGAATTTGAGAAGAAAGTGTTGGAAAAGGCGAAAAATTGGGTCGTTGGCGACCCTTTTGATCCTAAAGTTCAACAAGGACCCCAAACTAGTAAGGCACAATTTGATAAAATTCTTTCCTATATTAAGCATGGAAAGAATGAAGGAGCCACATTATTAACTGGGGGTAAACAAGTGGGAAACAAAGGATACTACATTGAACCTACTATTTTTACCAATGTTAAGGATGACATGTTAATAGCACAAGATGAAATATTTGGACCTGTTATGGCACTTTCTAAGTTCAAGACCATTGAGGAAGGAATTAAGAAAGCCAACAATACCAAATATGGCCTAGCAGCAGGGATTGTGACAAAGAATTTGGATATTGCAAATACAGTCTCAAGGTCAATTCGTGCAGGTATCATTTGGATCAATTGCTATTTTGCCTTTGATATTGATTGCCCTTTTGGAGGGTATAAAATGAGTGGATATGGAAGAGATTATGGATTGGAAGCACTTCACAAGTATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCATGGCTCTGA 1503 0.3959 MDNLSINGDSFIKIPTIKFKKLFINGGFVDSVSGKTFETVDPRTEEVITKIAEATKDDVDIAVKAAREAFDNGPWPRMPGAERAKIMVKWATLIEQNQEEIAALDTIDGGKLYSWCKTVDVPEAANILRYYAGAADKVHGEVFKTSRNLHMYTLMEPIGVVGHIIPWNFPTIMFFAKAAPCLAAGCTMVLKPAEQTPLSSLFFAHLAKEAGIPDGVLNVLPGFGSTAGAAITSHMDIDAVSFTGSTETGRRVMQAAALSNLKPVSLELGGKSPVLIFDDADVDKAVDLALFGILHNKGEICVAYSRVFVQEGIYDEFEKKVLEKAKNWVVGDPFDPKVQQGPQTSKAQFDKILSYIKHGKNEGATLLTGGKQVGNKGYYIEPTIFTNVKDDMLIAQDEIFGPVMALSKFKTIEEGIKKANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFDIDCPFGGYKMSGYGRDYGLEALHKYLQVKSVATPIYNSPWL* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2231 500 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 266 273 IPR029510 GO:0016491
Mtr6g2231 500 SUPERFAMILY ALDH-like 14 496 IPR016161 GO:0016491
Mtr6g2231 500 Pfam Aldehyde dehydrogenase family 28 490 IPR015590 GO:0016491
Mtr6g2231 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 270 459 IPR016163 GO:0016620
Mtr6g2231 500 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 7 500 - -
Mtr6g2231 500 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 294 305 IPR016160 GO:0016491
Mtr6g2231 500 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 488 IPR016162 GO:0016491
Mtr6g2231 500 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2231 Mtr-Chr6 39824282 39829544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2231 1 500 Aldehyde Dehydrogenase Gene Family AT3G24503 69.261 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2231 K12355 - gmx:100784449 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3728 8 47747363 47755356 Mtr6g2231 6 39824282 39829544 PCT