Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2225 ATGGACGGAATGGAAGACGATTCAAGATACCCGTCAAAAGGGTATCCTTTACGACGCAAGAACCCTAATCTTCGTCAAAAACACCCAATTCGTAACTTACAATATCAACGCTACAACGATCGCGAAGAAGATTTCGAAGACGATGAACCCGAAGAATTCGATGATTATAACGTAGATGAAGACGGAATTGGAAATGGGTATGTTGGGAATTTTGAACAAAATGATGGGTTTGTTAGAAAAAAGAGAAAAATGCGAAGCGGCCCTAGTGGCGGTTTTGGTGGTGGTTCTGTGTCGAATTATGAATTGTTACCATGGGGCAGTGGTAAATTTTCGAACTTTAATCGTGGTGGTAGTTCGAGTTCTGTCCATTCCTCTGGGTCGGAGGAATGGACAGAACACGCGACGTTTGTGTTGTTAGAGATATGGGGTGAGAAGTTTCTTCAAATTGGTAGGAATAGTTTGAGATCAGAGGAATGGCATGATGTTGCTGAGAAAGTTTCTGAGGAGTTGAAAGTTGAAAGGAATGTGGCACAGTGTAGGAGTGTATTGGATAAGGTGAAGAGGAGATATAAGAAAGAGAAGAGTAGAATGGATGAAATGGGTTTGGGATTAAGTTCTTGTAAATGGCCATTTTTCAAGAAGATGGATATGTTGATGTCGTCGAGTGCAAGGCAAGAGTATGGACTTGCGTGTGGTGTTGATTCTGGGGAGTATGTGTTTATGAATACGAGGGTTTATTTGAATAGGTCGAATGGTTTTGATGAGATGAGGGATAGTCCTGGCGAGTCTGAGAGTTCTGAGGATGATGAGGATGAGGATTTTGATGGTGACGAGGATGATGTCGATAGGGAAGAGGAGGAGGCTTCATATAGGATTTTGGCTGATTCGATTCAGAAATTTGGGAATATATATGAGAAGATTGAGAATACTAAGAGGCAACAGATGATGGAGTTGGAGAAGGTGAGATTGGATTTTAATAGGGAATTGGAGTTGCAGAAGAAGCAGATTTTGGATAGGGCTCAGGCTGAAATATCGAAAATACAGGAAGCAGTAGATGATGCCGATGGTGATGATGAGGACACAGACACTTCTGCTGATAATCTCAGTGAATAA 1113 0.4169 MDGMEDDSRYPSKGYPLRRKNPNLRQKHPIRNLQYQRYNDREEDFEDDEPEEFDDYNVDEDGIGNGYVGNFEQNDGFVRKKRKMRSGPSGGFGGGSVSNYELLPWGSGKFSNFNRGGSSSSVHSSGSEEWTEHATFVLLEIWGEKFLQIGRNSLRSEEWHDVAEKVSEELKVERNVAQCRSVLDKVKRRYKKEKSRMDEMGLGLSSCKWPFFKKMDMLMSSSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESESSEDDEDEDFDGDEDDVDREEEEASYRILADSIQKFGNIYEKIENTKRQQMMELEKVRLDFNRELELQKKQILDRAQAEISKIQEAVDDADGDDEDTDTSADNLSE* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2225 370 Pfam Myb/SANT-like DNA-binding domain 128 217 IPR044822 -
Mtr6g2225 370 Coils Coil 337 357 - -
Mtr6g2225 370 MobiDBLite consensus disorder prediction 352 370 - -
Mtr6g2225 370 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 36 366 - -
Mtr6g2225 370 MobiDBLite consensus disorder prediction 1 53 - -
Mtr6g2225 370 MobiDBLite consensus disorder prediction 261 285 - -
Mtr6g2225 370 Gene3D - 130 192 - -
Mtr6g2225 370 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 36 366 IPR044823 -
Mtr6g2225 370 MobiDBLite consensus disorder prediction 348 370 - -
Mtr6g2225 370 MobiDBLite consensus disorder prediction 251 287 - -
Mtr6g2225 370 Coils Coil 304 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2225 Mtr-Chr6 39754072 39758595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2225 290 349 Trihelix Transcription Factor Family AT3G14180 45.000 5.85e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr6g2225 Myb_DNA-bind_4 4.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2225 - - gmx:100790166 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2225 6 39754072 39758595 Mtr6g2225 6 39754072 39758595 ECH