Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2223 ATGGCAAAAGTGCAAGAGATTCATCATAATGGGGTGAACTTATCAACCCAAAGAGGTTTTGTGACAAAATTGAAATCTGGGTTCAAAGAAGCACTTTTCCCTGATGATCCTTTTAGGCAAATTATGGAAGAGGAAAAAAAATCTCGTAGGTTGATTAAAGGGGTGCAATATTTTATTCCAATCTTTGAGTGGTTACCAAATTATTCTTTGAGATTATTTTTCTCTGACTTAATTGCTGGTCTCACCATTGCTAGTCTTGCCATTCCTCAAGGCATTAGTTATGCCAAACTTGCTAATCTTCCTCCTCTCATTGGCCTTTATTCAAGCTTTGTGCCACCATTAGTGTATGCTGTTTTTGGGAGTTCTAGGCACATGGCAGTTGGGACAATAGCAGCAGCATCATTGCTTATTGCTAGCATAGTATCAACTGTAGCAGACCCTATAGCAGAACCAACATTGTATCTTCACTTGATTTTCACAACAACCTTTATCACTGGTGTTTTCCAGGCTTGTTTAGGTTTTTTCAGGCTTGGGATATTGGTTGATTTCTTTTCCCATTCTACCATCACTGGCTTTATGGGAGGGACAGCAGTGATTCTCATCCTCCAACAATTCAAGGGTATTTTTGGAATGAAACATTTTTCAACCAAAACCAACGTTGTAGCAGTGCTAGAGGGCATCTTTAGCAATAGACATGAGATAAGATGGGAAACTACAGTTCTTGGAATAATCTTCCTTGTTTTCTTGCAATTTACAAGGCACTTGAGGCTTAAAAAACCAAAACTCTTTTGGGTATCTGCTATAGCTCCAATAACATGTGTAGTAGTTGGTGGAGTTTTTACATACCTTGTGAAAGGTACACAACATGGAATTCAAATTGTGGGGCATCTAGACAAAGGACTAAATCCTATATCAATTCAATTTCTGACCTTTGATAGAAGATATTTATCCACAGTAATGAAAGCTGGCCTAATCAGTGGAGTATTATCATTAGCGGAAGGAATAGCCATAGGAAGAAGCTTTTCTGTAACTGCTAATACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGACTTATGAACTTGTTTGGTTCTTTCACATCATGTTACTTAACTAGTGGACCATTTTCCAAGACGGCTGTGAATTACAATGCAGGATGTAAATCTGCAATGACAAATGTGGTTCAAGCAGTAATAATGGCTCTAACACTACAATTTTTGGCACCATTATTTAGCAACACACCACTTGTTGCTCTATCAGCTATCATTGTATCAGCCATGTTAGGGTTGATAAACTATACAGAAGCTATTCATCTCTTTAAAGTTGATAAGTTTGATTTTATTATCTGCATGAGTGCATTCTTGGGTGTGGCCTTTTTAAGCATGGATATTGGCCTCATGCTCTCTGTTGGACTAGGTGTACTTAGAGGACTATTATATTTAGCAAGACCACCAGCATGCAAGCTTGGAAAGTTACCTGATTCTGGCTTATATAGAGATGTTGAGCAATATTCTAATGCTTCAACAATTCCAGGAGTTCTAATTATACAAGTTGGTTCTCCTATATACTTTTCAAATTCTACATACCTTAAAGAAAGGATTTTGAGGTATATTAAAAGTGAACAAAGCAGTTCTGGAGATATGGTTGAGCATGTCATACTCGTTTTAACAGCTGTGTCATCTATTGACACAACTGCTATTGAAGGATTATTGGAAACACAGAAAATATTGGAAATGAAAGGAATTCAGATGGCATTGGTAAACCCTAGGTTGGAGGTTATGGAGAAGCTAATAGCATCAAAGTTTGTTGAAAAAGTTGGGAAGGAATCATTCTATCTAAATTTGGAAGATGCAGTTTTGGCATGTCAATATTCACTTAGAACATCGAAGCCAAACAATAATGAAGACACTGTTTAA 1920 0.3719 MAKVQEIHHNGVNLSTQRGFVTKLKSGFKEALFPDDPFRQIMEEEKKSRRLIKGVQYFIPIFEWLPNYSLRLFFSDLIAGLTIASLAIPQGISYAKLANLPPLIGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIASIVSTVADPIAEPTLYLHLIFTTTFITGVFQACLGFFRLGILVDFFSHSTITGFMGGTAVILILQQFKGIFGMKHFSTKTNVVAVLEGIFSNRHEIRWETTVLGIIFLVFLQFTRHLRLKKPKLFWVSAIAPITCVVVGGVFTYLVKGTQHGIQIVGHLDKGLNPISIQFLTFDRRYLSTVMKAGLISGVLSLAEGIAIGRSFSVTANTPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKSAMTNVVQAVIMALTLQFLAPLFSNTPLVALSAIIVSAMLGLINYTEAIHLFKVDKFDFIICMSAFLGVAFLSMDIGLMLSVGLGVLRGLLYLARPPACKLGKLPDSGLYRDVEQYSNASTIPGVLIIQVGSPIYFSNSTYLKERILRYIKSEQSSSGDMVEHVILVLTAVSSIDTTAIEGLLETQKILEMKGIQMALVNPRLEVMEKLIASKFVEKVGKESFYLNLEDAVLACQYSLRTSKPNNNEDTV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2223 639 TIGRFAM sulP: sulfate permease 60 619 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr6g2223 639 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Mtr6g2223 639 PANTHER SULFATE TRANSPORTER 3.5-RELATED 6 633 IPR030316 GO:1902358
Mtr6g2223 639 SUPERFAMILY SpoIIaa-like 508 623 IPR036513 -
Mtr6g2223 639 ProSiteProfiles STAS domain profile. 504 623 IPR002645 -
Mtr6g2223 639 CDD STAS_SulP_like_sulfate_transporter 505 616 - -
Mtr6g2223 639 Pfam Sulfate permease family 73 453 IPR011547 GO:0016021
Mtr6g2223 639 Pfam STAS domain 505 619 IPR002645 -
Mtr6g2223 639 PANTHER SULFATE TRANSPORTER 6 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr6g2223 639 Gene3D STAS domain 484 626 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2223 Mtr-Chr6 39719194 39725870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2223 10 633 Inorganic Solute Cotransporters AT5G19600 61.661 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2223 K17471 - gmx:100789107 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2223 6 39719194 39725870 Mtr6g2223 6 39719194 39725870 ECH