Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2222 ATGAGGAAGAAACAGCATTATTCATCTCCATCTTATGTTATTGTTCTTTTTTCATTCTTCCTAAGTTTAACAACAACACTATCCTCATCCATTGTCTCAGATGGGTCCCACCTTACAGAAGCAGAAACACAATACATAAAACATAGACAACTCCTATACTACAGAGATGAATTCAACGACAGAGGTGAAAATGTTACGGTGGATCCAACCCTAGTTTTCTCCAACAACCGCATCAAAAACGCTTACGTGGCATTACAAGCTTTTAAACAAGCTATTCTTTCTGATCCACGTAACTGCACCGTTGATTGGGTAGGTTCCGATGTTTGCAGCTACACCAATGTTTTCTGTGCACCCGCACTTGATAATCCTAAGATCAATACCGTCGCTGGTATCGATCTTAATCACTGTGATATAGCCGGATACTTACCGGAAGAGCTCGGTCTTTTGACCGATCTCGCTTTATTTCATGTTAATACTAATCGATTTTGTGGAACTGTTCCACATAAATTCGAGAAGTTGAAAATCTTGTTTGAATTGGATCTGAGTAACAATCGTTTCGCCGGAAAGTTTCCGGAGGTTGTTCTCCGGTTACCGGAGTTAAAATTTCTAGATCTGAGGTTCAATGAATTTGAAGGAACTGTACCTAAGGAGCTCTTTGATAAAGATTTGGATGCTATTTTCATCAATCATAACCGTTTTGTGTTTAATTTACCGGAGAATTTTGGTAATTCTCCGGTGTCAGTGATTGTACTGGCGAACAACCGTTTCCACGGTTGTTTGCCAGCTGGGATTGGCAATATGACGAGATTAAATGAGATTATTGCGATGAATAACGGTTTTCAAGCGTGTTTGCCTGAGGAAGTAGGGTTGTTGAAGAATTTGACTGTGTTTGATGTTAGTTTCAACAAGTTTTTGGGGCCGTTGCCAGAGAAGTATGGAAATGCTGTGGGTTTGGAAGTGTTGAATGTGGCTCATAATTATCTTTCCGGTCAAATTCCGGCGAGTATTTGTGCGTTGCCGAATTTGGTGAATTTTACTTACAGTTATAACTTCTTTACCGGTGAACCACCGCAGTGTTTGGTGTTGCCGGCGGCGGATGATAGACAGAATTGTTTACCGGCGAGACCAAGACAACGGCCGGCGAAGACGTGTAAGGCGTTTGCGTCTCACCATGTTAATTGTAATGCTTTTAGATGTAAAGCATTTGTTCCTTCTTTGCCGTCACCGCCGCCGTCGCCGGTGTTTCCACCTCCAGTTGTTACTCCACCGACACCGGTATTTAATCCACCACCATCACCAGTATTGTCTCCACCACCGCCCTCACCACCACCACCAGTGTTTTCTCCACCACCGCCAGTGTATTCTCCACCTCCACCACCACCGCCGGTATATTCACCACCACCCCCACCTCCTTCACCACCACCACCTTCACCTCCACCACCACCTCCACCAGTTTACTCCCCACCACCCCCTCCGCCATCACCTCCACCACCTTCTCCCCCACCACCACCCCCACCGGTGTATTCACCACCACCACCTCCACCAGTGTACTCCCCACCACCACCTCCACCAGTGTACTCCCCACCACCACCTCCACCATCACCCCCACCACCTTCACCACCTCCTCCAGTTTACTTACCACCACCTCCTCCACCTCCACCACCACCTCCATCGCCTACACCACCATATTGTGTTAGGTCTCCACCACCTCCACCACCAAATTCACCACCACCACCGCCTCCACCTGCTCCTGTATTCTCACCACCTCCACCAGTTCCTTACTACTATAGCTCACCACCTCCACCACCAGCTCACTCACCTCCACCACCACCTCATTCGCCACCACCACCACCTCACTCACCTCCTCCACCCGTATATCCATATTTATCACCCCCACCACCTCCTCCAGTACACTCACCTCCACCACCAGTCTATTCACCACCACCGCCATCTCCACCACCTTGTGTAGAACCTCCACCACCTCCACCGCCACCTTGTGTAGAACCTCCACCACCATCATCGCCAGCGCCACATCAAACACCTTATCACCCACCACCATCCCCATCACCACCACCATCACCAGTATATGCCTATCCCTCACCGCCACCACCGGTATACACCTCACCCCCACCATCACCAGTATATGCATATCCCTCACCTCCACCACCGGTATATTCATCGCCGCCACCACCACCTGTATATGAAGGGCCTATACCACCTGTCTTTGGAATCTCATATGCATCACCACCACCACCACCCTTTTATTGA 2268 0.4868 MRKKQHYSSPSYVIVLFSFFLSLTTTLSSSIVSDGSHLTEAETQYIKHRQLLYYRDEFNDRGENVTVDPTLVFSNNRIKNAYVALQAFKQAILSDPRNCTVDWVGSDVCSYTNVFCAPALDNPKINTVAGIDLNHCDIAGYLPEELGLLTDLALFHVNTNRFCGTVPHKFEKLKILFELDLSNNRFAGKFPEVVLRLPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFNLPENFGNSPVSVIVLANNRFHGCLPAGIGNMTRLNEIIAMNNGFQACLPEEVGLLKNLTVFDVSFNKFLGPLPEKYGNAVGLEVLNVAHNYLSGQIPASICALPNLVNFTYSYNFFTGEPPQCLVLPAADDRQNCLPARPRQRPAKTCKAFASHHVNCNAFRCKAFVPSLPSPPPSPVFPPPVVTPPTPVFNPPPSPVLSPPPPSPPPPVFSPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPSPPPPSPPPPVYLPPPPPPPPPPPSPTPPYCVRSPPPPPPNSPPPPPPPAPVFSPPPPVPYYYSSPPPPPAHSPPPPPHSPPPPPHSPPPPVYPYLSPPPPPPVHSPPPPVYSPPPPSPPPCVEPPPPPPPPCVEPPPPSSPAPHQTPYHPPPSPSPPPSPVYAYPSPPPPVYTSPPPSPVYAYPSPPPPVYSSPPPPPVYEGPIPPVFGISYASPPPPPFY* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2222 755 PRINTS Proline rich extensin signature 401 413 - -
Mtr6g2222 755 PRINTS Proline rich extensin signature 417 433 - -
Mtr6g2222 755 PRINTS Proline rich extensin signature 440 452 - -
Mtr6g2222 755 PRINTS Proline rich extensin signature 455 476 - -
Mtr6g2222 755 MobiDBLite consensus disorder prediction 635 693 - -
Mtr6g2222 755 Gene3D Ribonuclease Inhibitor 242 371 IPR032675 -
Mtr6g2222 755 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 473 - -
Mtr6g2222 755 Gene3D Ribonuclease Inhibitor 82 241 IPR032675 -
Mtr6g2222 755 SUPERFAMILY L domain-like 82 363 - -
Mtr6g2222 755 MobiDBLite consensus disorder prediction 549 583 - -
Mtr6g2222 755 MobiDBLite consensus disorder prediction 599 622 - -
Mtr6g2222 755 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 473 - -
Mtr6g2222 755 MobiDBLite consensus disorder prediction 457 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2222 Mtr-Chr6 39668491 39671781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2222 1 399 Trihelix Transcription Factor Family AT4G18670 66.253 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2222 - - mtr:MTR_6g086115 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2222 6 39668491 39671781 Mtr6g2222 6 39668491 39671781 ECH