Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2203 ATGTCACCTCTATCATTAGCTATTCCAGCAATACTCTTTCTAATATTCATTTTGATTTTATCATCTTATCTATTTTTTCATCCAAATCAACATCAACATCATCAAAAAAATCCACCTGGTCCAAAACCTTTCCCAATTATTGGCAACCTCCACATCCTAGGAAAACTACCACATCGTACCCTTCAATCCCTTTCAAAAATACATGGACCAATCATGTCCTTAAAACTAGGAAAAATTCCAACCATCATAGTTTCCTCCCCAGAATCAGCTGAAAAATTTCTCAAAACCCACGACGCTATTTTCTCTAGTAGACCAAAACTTCAAGCGTCCGAACACATGTTTTACGGTGGAAAGGGATTGGGTTTAGCTCCATATGGTTCCTATTGGCGGAACATGAAAAAACTTTGTACTTTGCACCTTTTGAGTGGTTCGAAAGTTGAGATGTTTGCATCTATGAGAAGTGAGGAACTAGGGATGCTTATAAAGTCGGTTGATAAAGCAGCGGTTTTAGGTGAAGTCGTGAATCTTAGTGAGATAGTTGGTGAGGTTATAGCGAATATTACTTATAAGATGGTTTTGGGATGCAATAAGGATAGTGATTTGGATTTAAAGGGAGTAATTCGAGAGTGTATGAACTTGGCTGGAAGTTTTAATTTGGCAGATTTTTTGCCTTGGCTAAGCATATTTGATATTCAGGGACTAACAAGTCGAATGAAGAAAACAAGCAAGGCATTTGACCAAATTGTGGAGAAAATAATCAAAGATCATGAGCAAGACATGAAAAAGGACCCTCACCATAAGGACTTTATCGACATATTATTATCATTAATGCATAAATCCATGGATCCCCATGATGAAGAACAAAAACAAGTCATTGATATAACTAATATCAAAGCTATTATATTGGACATGATTGGTGGAGCATTAGACTCAGCTTCAACAACAATTGAATGGGCCATGTCTGAACTCTTAAGGCATCCAAATGTGATGAAGAAACTTCAAAATGAGCTAGAAAATGTGGTAGGTTTGAATAATAAGGTAAAAGAAACTGATTTTGAAAATTTACCTTATCTTAATATGGTAATAAAGGAGACATTAAGATTATATCCAGCTGGACCATTGTTAGCACCTCGTGAGTGTTTAGAAGATGCTACAATTGATGGTTACTACATAAAGAAAAATTCTAGGGTTATAATAAATGCTTGGGCTATAGGAAGAGATCCTAAAATTTGGACGAATAATTGTGACATATTTTATCCAGAAAGATTTATCAATAGTAATATAGATCTTCGAGGACATGATTTTCAACTTATACCATTTGGGTCGGGTCGTAGAGGGTGCCCTGGAATTCAACTAGGGCTAAATACTGTTAGGCTTGTTGTTGCCCAATTGGTACATTGCTTTGATTGGGAACTTCCCTTTGGTATGTCTCCTAATGATTTGGATATGAGTGAAAAATTTGGACTCTCAATGCCAAGATTTAACCACTTGCTAGCTGTGCCAACAACTCGTAGACAAAAGTTTGATATATAG 1533 0.3614 MSPLSLAIPAILFLIFILILSSYLFFHPNQHQHHQKNPPGPKPFPIIGNLHILGKLPHRTLQSLSKIHGPIMSLKLGKIPTIIVSSPESAEKFLKTHDAIFSSRPKLQASEHMFYGGKGLGLAPYGSYWRNMKKLCTLHLLSGSKVEMFASMRSEELGMLIKSVDKAAVLGEVVNLSEIVGEVIANITYKMVLGCNKDSDLDLKGVIRECMNLAGSFNLADFLPWLSIFDIQGLTSRMKKTSKAFDQIVEKIIKDHEQDMKKDPHHKDFIDILLSLMHKSMDPHDEEQKQVIDITNIKAIILDMIGGALDSASTTIEWAMSELLRHPNVMKKLQNELENVVGLNNKVKETDFENLPYLNMVIKETLRLYPAGPLLAPRECLEDATIDGYYIKKNSRVIINAWAIGRDPKIWTNNCDIFYPERFINSNIDLRGHDFQLIPFGSGRRGCPGIQLGLNTVRLVVAQLVHCFDWELPFGMSPNDLDMSEKFGLSMPRFNHLLAVPTTRRQKFDI* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2203 510 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 504 - -
Mtr6g2203 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 Gene3D Cytochrome P450 28 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 Pfam Cytochrome P450 38 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 SUPERFAMILY Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2203 510 Coils Coil 330 350 - -
Mtr6g2203 510 PANTHER CYTOCHROME P450 93A3-LIKE 2 504 - -
Mtr6g2203 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2203 Mtr-Chr6 39360955 39365519 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2203 4 504 Cytochrome P450 AT5G07990 39.608 5.87e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2203 - - gmx:100782715 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2203 6 39360955 39365519 Mtr6g2203 6 39360955 39365519 ECH