Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2200 ATGTTACCTCAAACATTCACTCTCCCTGAAATTCTCTTTGTTATATTCATTCTCATTCTGTCAGCTACTATTTTTAACTCAAAATGGAATCAAAAAAATGGTAGGAAAAATCCACCAGGTCCAAAACCTTTGCCAATTATTGGTAACCTTCACATGCTAGGAAAACTTCCACATCGTTCCCTTCAACTCCTTTCTCAAAAATATGGACCAATAATGTCCTTCAAATTAGGACAAGTCCAAACCATTGTGGTTTCATCACCTCAAATTGCTGAATTATTCCTCAAGACCCATGATAGTATTTTCTCTAGCAGGCCTAAAGCTTTTGCTGCAGATTATATGACATATGGTAAAAAGGGCATAATTTTCACCGAGTATGGCGACTATTGGCGCAATATGAGGAAATTGTGTACCATTCAATTATTGCATTCTTCAAAAGTTGAGATGTTTGCTCCTTTGAGAAAGGAAGAGGTTGGATTGTTGGTTAAGTCACTAAGAAAATCAGCTACATTACATGAGGTTGTTAATGTTAGCAAGGTTGTGGCTGAGCTTATTGAGAATATCACTTGTAAAATGATATTGGGACGAAGCAAAGATGATAGGTTCGACTTAAAGGGTATTGTTCACAAGGCGATGTTATTGACTGGAAAATTTAATCTCTCTGATTATCTACCTTGGCTACGCCCGTTTGATCTCCAGGGAATTGAAAGACAAATTAAGAAAACATGGAAGCAGTATGATGAATTGTTAGAGCAAATAATCAAAGAGCGTGAGAATCAATCAATTGAAGAACAGAAAGGCCATAACAACAAAGACTTTGTAGACATATTGTTATCACTCATGAACCAATCAATTGATTCCAAAGACAACAAATATGACATTGATAGAACCAACATCAAGGCTATTTTAATAGACATGATTTCAGCAGCACTAGACACAACCTCTGTTGTAATTGATTGGGTACTTTCACAACTTCTAAAGCATCCTTATGCAATGAAGAAACTCCAACAAGAGCTAGAAAATGTGGTTGGCATGAATAGACAAGTGGAGGAGACCCACTTGGCAAAATTACCTTACTTGACTATGGTTGTGAAAGAGACCTTAAGGTTGTGCCCTGTTGGACCTTTGTTAGTACCCCATGAGTGTCTTGAAGATGTTGTTGTGGATGGTTATTACATCAAGAAAAAGACAAGAATTTTAATAAATGCATGGACAATAGGGAGAGACACTAATGTTTGGTCGGATAATGCTGAGACGTTTTATCCAGAGAGATTTGAAGATAGTGATGTAGACATTCGTGGACATGATTTTCAACTCATACCATTTGGTTTTGGTCGAAGAAGTTGTCCTGGAATTCAAATGGGTCTTACTTCTGTGAAACTTGTTGTGGCTCAGCTAATGCATTGCTTCAATTGGGAGCTTCCGGATGCTATGTCCAAAGACGAGTTAGATATGTCTGAAAAATTTGAGCTCAGCATGCCGAGATGTCAACCCTTGCTAGCTATGCCAACCTATCGTCTGGTCGCTTAG 1527 0.3785 MLPQTFTLPEILFVIFILILSATIFNSKWNQKNGRKNPPGPKPLPIIGNLHMLGKLPHRSLQLLSQKYGPIMSFKLGQVQTIVVSSPQIAELFLKTHDSIFSSRPKAFAADYMTYGKKGIIFTEYGDYWRNMRKLCTIQLLHSSKVEMFAPLRKEEVGLLVKSLRKSATLHEVVNVSKVVAELIENITCKMILGRSKDDRFDLKGIVHKAMLLTGKFNLSDYLPWLRPFDLQGIERQIKKTWKQYDELLEQIIKERENQSIEEQKGHNNKDFVDILLSLMNQSIDSKDNKYDIDRTNIKAILIDMISAALDTTSVVIDWVLSQLLKHPYAMKKLQQELENVVGMNRQVEETHLAKLPYLTMVVKETLRLCPVGPLLVPHECLEDVVVDGYYIKKKTRILINAWTIGRDTNVWSDNAETFYPERFEDSDVDIRGHDFQLIPFGFGRRSCPGIQMGLTSVKLVVAQLMHCFNWELPDAMSKDELDMSEKFELSMPRCQPLLAMPTYRLVA* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2200 508 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 Gene3D Cytochrome P450 27 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PANTHER CYTOCHROME P450 93A3-LIKE 14 507 - -
Mtr6g2200 508 Coils Coil 331 351 - -
Mtr6g2200 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 507 - -
Mtr6g2200 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr6g2200 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Mtr6g2200 508 SUPERFAMILY Cytochrome P450 38 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2200 Mtr-Chr6 39300418 39302504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2200 5 507 Cytochrome P450 AT5G07990 38.477 5.26e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2200 - - gmx:100782181 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2200 6 39300418 39302504 Mtr6g2200 6 39300418 39302504 ECH