Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2186 ATGAATATACCACCTAACAACCATACTAAAGAACCTAGGGATGGGGGAAGTTCGAGTTCAAATTCCAACGGTATTAACTTAGCTCAGAGGAAAATTATTACCGACTCGAAGTTTCAACGTGTTTTACATACGCCGCTTATGACAGAGCCACCAGGTGCATTGATAAACCAAGTAGGTAATAAGTTTTACGAGGCATTTCAACAAAAGCATGGAAGTTATGTCGATCTTCCTTCTGCCAAAATTTCGGAACTAATGAAATCATCAAGTTTGGATAATGCTCCTACTCAATCACTTTTGAGTGTTGTCAATGGTATACTAGAAGAAAGTGTTGAAAGAAGAAATGGAGAAATACCTCCTCGTGTGGCGTGCTTGCTAAGAAAAGTTGTCCAAGAGATTGAGCGGCGTATATCTACACAACAAGAGCATTTAAAAACTCAAAACAATCTTTTCAAGACTCGTGAAGAAAAATATAAATCAAGAATAACAGTACTTGAGGCTCTTGCATCAGGAACAACTGAAGAGAGTAAGGTCTCAAAGAATGAGAATATCATAAAGGAAGAAAAAAATGCACATGATCACTCAAAACCAATTGAGAAGATTGTGAAAGAAGAAAAGAAGCAAAATGGCTCAATGCAGGTTGAGAACACTAAAGTTGAAGAAAAGAATACAAATGACACAATTCATGCCGAAAAGAAGAAAGAAGAGCAAAATAAGAAGGAAATTGATAAAGAAGTTATGAGATTGATTAAAGAGGTTGAAGATAAAAATACGGAAAAGAAGGAACTTGATAAAGAAGTTATTAGATTGATTAAAGAAGTCAAAGACAAAAATGTCGAAAACAAGAAAATTGATAAAGAAGTTATTAGATTGACTAAAGAAGTGGAAGACATAAATTCGGAAAAGAAGAAAATCGATAAAGACGTCATTAGATTGACTAAAGAGGTGGAAGACAAAAGTATGGAAATTTCAACATTGAAGCAAGAAGTAGAAACCATGCAAAAAAAATATGAAGTGCAATGCTCAAAGTTAGAAGAAAAAACTAAGGATGCTAAAGGTGAATTGAACCAGAAATCACAAGAATATGAGCTTCTATTGGAAAAGTTAAGAGATAAGGTTAAAGAGAGTGAAGCTATTAATGAGGCAAAATATCAGAAATGGAACATGAAACATAACCTAATGCAGAATGCTATGAATTTTCAATTTAATTCCATAAAGCAATTGAAATTGTCTTGGGAAACAATTAAGAAGGACATTATGAAAGAGCAAATGATTTATTCCGAGGAATGCAATCGGTTAGGTGTAAATCTTAAACCACTAGTGCATGCATCCGAGAATTATCGTACGATTCTTGCAGAAAATAGAAAACTATTTAATGAACTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTCTTCCTGGACAAAAAGAAAAACAAACTATTGTGGAACGTATTGGTGAATCTGATTTGGTTGTAGCAAATCCCTCCAAGCAAGGGAAAGAAGCACTCAAAACATTTAAGTTTAATAAGATCTTTGGTCCTTCATCAACTCAAGTTGAGGTGTATAATGATATACAAGCTTTTATAAGATCAGTACTTGATGGTTATAATGTTTGTATATTTGCTTATGGTCAGACAGGTTCAGGAAAAACTTACACAATGAGTGGTCCAAATGGTGCATCCAATGAGAATCTTGGTGTTAACTATAGAGCTCTAAATGACCTATTCAACATATCCTCAAGTAGACAAAGCTCTATAGTTTATGAAATTGGTGTCCAGATAATTGAGATATATAATGAACAAGTTCGAGATTTGTTACTTGGGATATTGAATCACTCTCAACCAAATGGCTTAGCAGTACCTGATGCTAGCATGCACCCTGTCAAATCAACTAATGATGTCATAAAGCTAATGGAAATTGGTTTGAAAAATAGAGCAAAGGGTTCAACTGCTATGAATGAAAGAAGTAGTCGATCTCATAGTGTTGTTTCGATTCATGTTCGTGGGGCGGATAAGAAAACCGGTTCAACTCTCCAAGGTAATCTTCATTTGGTAGATTTGGCCGGAAGTGAAAGGATAGATCGTTCTGAAGTAACCGGAGATAGACTAAAGGAAGCACAACATATTAACAAATCATTGTCAGCTCTTGGAGATGTCATTTTCGCCCTTGCTCAAAAGAGTGCTCATATACCATATAGAAACAGCAAGCTCACACAAATTTTGCAAACCTCTCTTGGTGGTCATGCAAAGACACTCATGTTAGTCCAAATTAATTCAGACATAAAGTCTTACTCTGAATCTTTGAGTACTTTAAAGTTTGCTGAAAGGGTTTCTGGAGTTGAGTTAGGAGTTGCAAGAAGTACAAAAGAGGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTGAAAGACACTATTTCAACAAAAGATGAGGAAATTGAGAGGCTACAATTACTTAAGGATCTAAAAAATGATAATTCTGAGAAGCTTGAAGATTAA 2520 0.3472 MNIPPNNHTKEPRDGGSSSSNSNGINLAQRKIITDSKFQRVLHTPLMTEPPGALINQVGNKFYEAFQQKHGSYVDLPSAKISELMKSSSLDNAPTQSLLSVVNGILEESVERRNGEIPPRVACLLRKVVQEIERRISTQQEHLKTQNNLFKTREEKYKSRITVLEALASGTTEESKVSKNENIIKEEKNAHDHSKPIEKIVKEEKKQNGSMQVENTKVEEKNTNDTIHAEKKKEEQNKKEIDKEVMRLIKEVEDKNTEKKELDKEVIRLIKEVKDKNVENKKIDKEVIRLTKEVEDINSEKKKIDKDVIRLTKEVEDKSMEISTLKQEVETMQKKYEVQCSKLEEKTKDAKGELNQKSQEYELLLEKLRDKVKESEAINEAKYQKWNMKHNLMQNAMNFQFNSIKQLKLSWETIKKDIMKEQMIYSEECNRLGVNLKPLVHASENYRTILAENRKLFNELQELKGNIRVYCRIRPFLPGQKEKQTIVERIGESDLVVANPSKQGKEALKTFKFNKIFGPSSTQVEVYNDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGASNENLGVNYRALNDLFNISSSRQSSIVYEIGVQIIEIYNEQVRDLLLGILNHSQPNGLAVPDASMHPVKSTNDVIKLMEIGLKNRAKGSTAMNERSSRSHSVVSIHVRGADKKTGSTLQGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSAHIPYRNSKLTQILQTSLGGHAKTLMLVQINSDIKSYSESLSTLKFAERVSGVELGVARSTKEGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKNDNSEKLED* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2186 839 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 193 - -
Mtr6g2186 839 PANTHER KINESIN-LIKE PROTEIN KLP-3 297 827 - -
Mtr6g2186 839 Pfam Kinesin motor domain 472 783 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2186 839 ProSiteProfiles Kinesin motor domain profile. 466 785 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2186 839 SMART kinesin_4 464 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2186 839 MobiDBLite consensus disorder prediction 205 238 - -
Mtr6g2186 839 PRINTS Kinesin heavy chain signature 540 561 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2186 839 PRINTS Kinesin heavy chain signature 655 672 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2186 839 PRINTS Kinesin heavy chain signature 686 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2186 839 PRINTS Kinesin heavy chain signature 735 756 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g2186 839 Coils Coil 224 385 - -
Mtr6g2186 839 Coils Coil 446 466 - -
Mtr6g2186 839 MobiDBLite consensus disorder prediction 1 24 - -
Mtr6g2186 839 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 30 193 - -
Mtr6g2186 839 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 297 827 - -
Mtr6g2186 839 Coils Coil 799 839 - -
Mtr6g2186 839 MobiDBLite consensus disorder prediction 218 238 - -
Mtr6g2186 839 Gene3D - 302 344 - -
Mtr6g2186 839 Gene3D Kinesin motor domain 408 787 IPR036961 -
Mtr6g2186 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 823 IPR027417 -
Mtr6g2186 839 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2186 Mtr-Chr6 39055742 39061038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2186 454 785 Calmodulin-binding Proteins AT5G65930 38.192 9.21e-66 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2186 K10406 - aprc:113855795 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2186 6 39055742 39061038 Mtr6g2186 6 39055742 39061038 ECH
Mtr8g3751 8 48009146 48016830 Mtr6g2186 6 39055742 39061038 PCT