Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2177 ATGAATATATTGAAGTACAAATCTTCATGTGTTTCAAAAGATTTAGTTGGGATTAATTCTCCTATAGAAGCATTACAAAATCATTTGCTTTTGGACTCGGATGATGGTGTTCGTGTTATAGGAATTTGTGGAATGGGAGGAATAGGGAAGACAGCCCTTGCTATGACTTTGTATGGCCAAATATCTCATCGATTTAGTGCATCCTGTTTTATTGATGATGTAAGCAAAATTTATAGATCAGGTGATGGTCCCCTCGATGCACAAAAGCAAATCCTACTTCAAACTGTCGGCATAGAACACAATCAAATATGCAATCATTACAGCGCAACTAATTTGATGCGAATAAATCTATGTCATGAAAGGGCCCTTCTGATTCTTGATAATGTAGATCAAGTTGGACAATTGGAAAAAATAGCTGTGCGTCGTGAATGGTTAGGTGCAGGGAGTAGAATTATTATCATTTCTAGAGATGAGCATATATTGAAAGAGTATGGAGTGGATGTAGTTTACAAAGTTCCACTTTTGAATCAGGCCGAGTCTCACATGTTATTTTGTCGAAAAGCTTTCAAAGTTGAGAAAATTATTATGAGTGATTATCAAAATTTGGCAGATGAGATACTGAATTATGCTAAAGGTCTACCGCTAGCAATTACAGTATTGGGCTCATTTTTGTTTGGTCGTAATGTGACTGAATGGAAGAGTGCATTGTCCAGATTGAGAGAAAGTCCAGATAATAATGTCATGGATGTGCTGCAGATAAGTTTTGATGGTCTAAATCTTACGGAAAAAGAAATGTTTCTTCATATTGCTTGTTTTTTCAACTTTCTGCACGAGAAAAGAGTTAAAAACATTCTAAATAGTTGTGGATTTCATGCTGATATTGGATTAAGAGTTCTCCTTGATAAATCACTTATAAGCATTGATAATTCAATAATTAAAATGCATTATTTGTTGGAAGAACTAGGCAGAAAAATTGTGCAAGAAAGTTCAAGCAAAGAGCAAAGAAAGTGGAGCAGGTTGTGGTCCCATGAACAAATCTACAATGTTATGATGGAGAAAATGGAAAAGCATGTTGAGGCCATATCTTTGATTGGATGGATTGATATGATAGTTTAA 1116 0.3504 MNILKYKSSCVSKDLVGINSPIEALQNHLLLDSDDGVRVIGICGMGGIGKTALAMTLYGQISHRFSASCFIDDVSKIYRSGDGPLDAQKQILLQTVGIEHNQICNHYSATNLMRINLCHERALLILDNVDQVGQLEKIAVRREWLGAGSRIIIISRDEHILKEYGVDVVYKVPLLNQAESHMLFCRKAFKVEKIIMSDYQNLADEILNYAKGLPLAITVLGSFLFGRNVTEWKSALSRLRESPDNNVMDVLQISFDGLNLTEKEMFLHIACFFNFLHEKRVKNILNSCGFHADIGLRVLLDKSLISIDNSIIKMHYLLEELGRKIVQESSSKEQRKWSRLWSHEQIYNVMMEKMEKHVEAISLIGWIDMIV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2177 371 Pfam NB-ARC domain 20 253 IPR002182 GO:0043531
Mtr6g2177 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 269 IPR027417 -
Mtr6g2177 371 SUPERFAMILY "Winged helix" DNA-binding domain 246 349 IPR036390 -
Mtr6g2177 371 Gene3D - 5 169 IPR027417 -
Mtr6g2177 371 PRINTS Disease resistance protein signature 39 54 - -
Mtr6g2177 371 PRINTS Disease resistance protein signature 116 130 - -
Mtr6g2177 371 PRINTS Disease resistance protein signature 210 224 - -
Mtr6g2177 371 Gene3D - 174 259 IPR042197 -
Mtr6g2177 371 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 353 IPR044974 GO:0006952
Mtr6g2177 371 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 9 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2177 Mtr-Chr6 38971215 38972433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2177 22 359 WRKY Transcription Factor Family AT5G45050 32.153 1.98e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2177 - - mtr:MTR_6g088245 563.918