Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2176 ATGGTTTACTTTGAGAATACAATAGGATATGAAGGTGATTTCTCATGGATATGTATGAAGGATTTTGATTTCACTTCTTTTTGTTCTCTATGGAGTGCAATAGACACTATCAATATACTTTTTGTCTGCGCCTACTACACGTCCTTGGCTATCAGTTTAACCAGAACAACTTCCGCAAATAAGAGCCAGACAAAAAGTTGGATTTTCTCACTTGTCTCAATCTGTTGTGCTTTTACTAGCATTGCATATTTTGCCACTGGATTTTGGAATCTCTTAGACAAAACTGGTAACTCTAAGGATCTAAGCTGGTTAGCTTGCATTATCAGAGGAATCATTTGGATATCTATAACAGTTTCTTTGCTTGTTCAGCAAGTCAAATGGATTCAAATACTAAACTCTGTCTGGTGGGCATCTTCATGTGTATTGGTTTCAGCTCTCAACATCGACATTTTGTTCAAAGGTCATGCTATTCAAACTTTTGATATCACAATATGGCTTGTACACTGTCTTCTTCTACTTTGTTCCTACAAAAATCTTGGTTATTTAGGAACTCATAGTGTCCCAGAATGTTTATATTCCGAGCCACTACTAGCTCAGAAATGTGAAACAAAACAAACGGGACTAAGCAATGCTACCTTGCTCAGCAAGTTAGTTTTCTCTTGGGTTAACTCTTTGCTTAGTTTAGGATACTCAAAGCCACTAGCTCTTGAAGACATACCTACCCTTGTTTCTGAAGATGAAGCAAACACTGCGTATCAAAATTTTGTGCATGAATGGGAGTCTCTTGGAAGGAAGAGGAGTAAGAACAGTACAAAAAATTTGGTTCTTTGGTCTATAGTTAAAACTTACTTACAAGAAAACATATTAATAGCATTCTATGCACTACTCAGAACTATTTCTGTTGTAGTTTTACCTCTAATTCTCTATGCTTTTGTTAACTACTCAAGTAGAACCGAGGGAAATCTCAGAGAAGGTCTTTCCATAGTTGGTTTTCTGATTCTCACCAAATTAGTCGAGTCTTTTTCCCAGAGACATTGGTTTTTTAACTCAAGGAGGTTAGGAATGAAAATGAGATCAGCTCTGATGGTGGCAGTTTATGAGAAGCAGCTAAAGCTTTCTAGCTCGGGAAAGATAAGACACTCGGCCGGTGAAATTGTGAATTACATTGCAGTTGATGCATATAGAATGGGAGAATTTCCATGGTGGTTTCATATAACATGGACTTGTATACTACAACTTGTTCTGTCCATTGCTGTCCTTTTCGGTGTTGTTGGTATTGGTGCTCTTCCTGGTTTAGTCCCTCTTGTTATATGTGGACTTCTCAACGTACCATTTGCAAGGATCCTACAAAATTGTCAGTCACAGTTTATGATTGCACAGGACGAACGTCTTAGATCAACTTCCGAGATTCTAAATAGTATGAAGATCATTAAGTTACAATCATGGGAAGAAAAATTTAAGAACTTAGTTGAGTCCTTACGCGATAAAGAGTTTGTATGGTTGTCTAAGTCGCAGATCCTGAAAGCTTCTAGTTCATTTCTTTTTTGGATGTCTCCTACAATTATATCATCTGTTGTTTTCCTTGGATGTGCTATTTCCAATAGCGCACCATTGAATGCTCAAACCATTTTCACAGTTCTTGCAACATTGAAAAGCATGGGAGATCCTGTTAAAATGATTCCAGAAGCTCTATCGATTTTGATTCAAGTTAAGGTTTCCTTTGATCGTCTTAATAACTTTTTGCTTGATGAAGAACTTCACAATGATGATAATAGTGAAAAACACATAAAGCATTGTTCATCTAATGTCGTGGAAATTCAAGCTGGCAACTTCACTTGGGATCTTGAATCTGTGTCCCCAACTTTAACAGATGTTAATTTAGAAATAAAACGGGGACAGAAAATAGCAGTTTGTGGACCGGTTGGAGCTGGAAAATCGTCTCTTCTGTATGCAATACTCGGAGAGATTCCAAATATTCAAGGAACTGTTAATGTAGGTGGCACTCTTGCCTATGTTTCTCAATCTTCATGGATACAAAGTGGAACCGTTCGAGATAATATACTCTTTGGCAAGCCAATGAACAAAGCAAGATATGAGAATGCTATTAAAGCTTGTGCCTTGGACGAAGATATCAATGATTTGAGTCATGGTGATCTTACAGAAATAGGTCAAAGAGGGATTAACCTAAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGAGCAGTTTACAACGATGCTGATATCTATCTCCTTGATGACCCTTTCAGCGCAGTTGACGCGCACACTGCTGCTATTCTGTTCAATGACTGCATTATGACTGCTCTAAGAGAGAAAACAGTCATTCTTGTGACACATCAAGTGGAGTTTCTCTCAAAAGTTGTTGATAGAATATTGGTAATGGAGGATGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCCTAATAGCTGGGACAGCCTTTGAACAACTTGTGAACGCGCACAAAGACGCACTTACTGAGTTGAATCAAGATAACAAAAACCAAGGAAGTTCGGAACATGATGTCTTGGTTAATCCACAAGAGTCTCATAGTGTGAAAGAGATTTCTACCAGAGGTCAACTTACAAAAGAGGAAGAAAAAGAGATTGGTGATGTTGGCTGGAAGCCATTCTGGGATTATATATCTTATTCCAAGGGATCATTGATGCTGTGTTTTATTGTGTTAGCACAATCTGCTTTTATGGCTTTGCAGACTGCATCATCCTTTTGGCTTGCTATTGCGATCGAAATTCCAAAAGTAACGAGTGCCAACTTGATTGGAGTTTATTCATTAATTTCTTTCACTGGTGTTATGTTTGTATATATAAGGTCTTACTTGATGGCGCGTCTCGGATTAAATGCTTCTATTGCCTACTTCTCTAGCTTCACTACAGCTATCTTCAATTCTCCAATGATGTTCTTCGATTCTACGCCGGTTGGAAGGATTTTAACCCGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATGCCTCATGCCGTCCACTTTGCCTTATCAGTAGCAATTGAAGTTCTGGTAATAATTTGCATAATGGCTTCAGTCACATGGCAAGTTCTAATTGTTGCTGTTCCGGCAATGGTGGCATCGATATTCATTCAGCATTATTATCAAGCAACTGCAAGGGAACTAATGCGGATCAACGGAACCACCAAAGCACCAGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTATAAGAGCATTCAACATGGTAGACAGACTTATGAAATACTACTTAAAACTTGTCGACACAGATGCTACGCTGTTCTTTCATTCTAATGTTGCCATGGAGTGGATGGTTATAAGGATTGAGGCACTTCAAACTTTGACAGTTATCACTGCAGCATTGTTGCTTATTCTACTTCCTCATGGATATGTGTCTCCAGGACTTGTGGGACTGTCTCTTTCGTATGCTTTTAATTTGACAGGAGCCCAGATATTTTGGACTAGATGGTTTTCCACCTTATCAAACAACATAATCTCGGTTGAAAGAATCAAGCAGTTCATCGACATTCCAGCCGAACCTCCTGCCATTATGGAGGATAACCGACCGCCATCTCCATGGCCTTCCAAGGGTAGGATTGAAGTTCAAGGCTTAGAGATTAGATACCGTCCAAATGCACCATTAGTCCTTAAGGGAATCACTTGTACATTTAATGAAGGGAGTAGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGAAAAAGTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTTCGAGAGGTGATATTATCATAGATGGGATTAACATATGCTCGATCGGGTTGAAAGATTTGAGAATGAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGCATTAGGACAAACCTTGACCCTTTAGGCCTATACACAGATAATGAAATATGGAAGGCTTTGGAGAAATGTCACCTCAAGGAAACAATCAGCAGGCTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGGCAGCGCCAACTGTTTTGTCTTGGAAGAGTACTACTCAAGAGGAACAAAATTTTAGTTCTAGATGAAGCTACAGCCTCCATTGACTCTGCCACAGATGCCATTCTACAAAGAGTAATTAGACAAGAATTTGCAGAATGCACTGTAATAACCATTGCTCACAGAATTCCAACTGTAATAGACAGTGACATGGTCATGATCCTATCTTATGGGAAACTGGTGGAATATGATGAGCCTTCAAAGCTAATGGAAACCAACTCTTCATTCTCTAAGCTGGTAGCTGAGTATTGGTCTAGCTACAAGAAGAGTTCCATCCCAAACACTAGCATACAGAAACAATGA 4395 0.3909 MVYFENTIGYEGDFSWICMKDFDFTSFCSLWSAIDTINILFVCAYYTSLAISLTRTTSANKSQTKSWIFSLVSICCAFTSIAYFATGFWNLLDKTGNSKDLSWLACIIRGIIWISITVSLLVQQVKWIQILNSVWWASSCVLVSALNIDILFKGHAIQTFDITIWLVHCLLLLCSYKNLGYLGTHSVPECLYSEPLLAQKCETKQTGLSNATLLSKLVFSWVNSLLSLGYSKPLALEDIPTLVSEDEANTAYQNFVHEWESLGRKRSKNSTKNLVLWSIVKTYLQENILIAFYALLRTISVVVLPLILYAFVNYSSRTEGNLREGLSIVGFLILTKLVESFSQRHWFFNSRRLGMKMRSALMVAVYEKQLKLSSSGKIRHSAGEIVNYIAVDAYRMGEFPWWFHITWTCILQLVLSIAVLFGVVGIGALPGLVPLVICGLLNVPFARILQNCQSQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKNLVESLRDKEFVWLSKSQILKASSSFLFWMSPTIISSVVFLGCAISNSAPLNAQTIFTVLATLKSMGDPVKMIPEALSILIQVKVSFDRLNNFLLDEELHNDDNSEKHIKHCSSNVVEIQAGNFTWDLESVSPTLTDVNLEIKRGQKIAVCGPVGAGKSSLLYAILGEIPNIQGTVNVGGTLAYVSQSSWIQSGTVRDNILFGKPMNKARYENAIKACALDEDINDLSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCIMTALREKTVILVTHQVEFLSKVVDRILVMEDGKVIQSGSYENLLIAGTAFEQLVNAHKDALTELNQDNKNQGSSEHDVLVNPQESHSVKEISTRGQLTKEEEKEIGDVGWKPFWDYISYSKGSLMLCFIVLAQSAFMALQTASSFWLAIAIEIPKVTSANLIGVYSLISFTGVMFVYIRSYLMARLGLNASIAYFSSFTTAIFNSPMMFFDSTPVGRILTRASSDLSILDFDMPHAVHFALSVAIEVLVIICIMASVTWQVLIVAVPAMVASIFIQHYYQATARELMRINGTTKAPVMNFAAETSLGVVTIRAFNMVDRLMKYYLKLVDTDATLFFHSNVAMEWMVIRIEALQTLTVITAALLLILLPHGYVSPGLVGLSLSYAFNLTGAQIFWTRWFSTLSNNIISVERIKQFIDIPAEPPAIMEDNRPPSPWPSKGRIEVQGLEIRYRPNAPLVLKGITCTFNEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDIIIDGINICSIGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYTDNEIWKALEKCHLKETISRLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAILQRVIRQEFAECTVITIAHRIPTVIDSDMVMILSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSYKKSSIPNTSIQKQ* 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2176 1464 Gene3D ABC transporter type 1, transmembrane domain 274 589 IPR036640 GO:0005524|GO:0016021
Mtr6g2176 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 606 828 IPR003439 GO:0005524
Mtr6g2176 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1201 1445 IPR027417 -
Mtr6g2176 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 900 1162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g2176 1464 CDD ABCC_MRP_domain2 1210 1430 - -
Mtr6g2176 1464 Gene3D - 616 856 IPR027417 -
Mtr6g2176 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 288 569 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g2176 1464 CDD ABCC_MRP_domain1 604 805 - -
Mtr6g2176 1464 Gene3D ABC transporter type 1, transmembrane domain 861 1193 IPR036640 GO:0005524|GO:0016021
Mtr6g2176 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 828 IPR027417 -
Mtr6g2176 1464 SUPERFAMILY ABC transporter transmembrane region 883 1192 IPR036640 GO:0005524|GO:0016021
Mtr6g2176 1464 Pfam ABC transporter transmembrane region 290 549 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g2176 1464 Pfam ABC transporter transmembrane region 900 1157 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr6g2176 1464 SUPERFAMILY ABC transporter transmembrane region 276 583 IPR036640 GO:0005524|GO:0016021
Mtr6g2176 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1214 1446 IPR003439 GO:0005524
Mtr6g2176 1464 CDD ABC_6TM_ABCC_D1 289 577 IPR044746 GO:0140359
Mtr6g2176 1464 Gene3D - 1195 1446 IPR027417 -
Mtr6g2176 1464 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 66 1457 - -
Mtr6g2176 1464 Pfam ABC transporter 622 756 IPR003439 GO:0005524
Mtr6g2176 1464 Pfam ABC transporter 1229 1377 IPR003439 GO:0005524
Mtr6g2176 1464 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 66 1457 - -
Mtr6g2176 1464 ProSitePatterns ABC transporters family signature. 729 743 IPR017871 GO:0005524
Mtr6g2176 1464 SMART AAA_5 631 805 IPR003593 -
Mtr6g2176 1464 SMART AAA_5 1238 1430 IPR003593 -
Mtr6g2176 1464 CDD ABC_6TM_ABCC_D2 894 1187 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2176 Mtr-Chr6 38933261 38948021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2176 581 850 Calmodulin-binding Proteins AT2G36910 25.773 4.69e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2176 - - gmx:100784827 2209.49