Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2167 ATGTTCTTCTCCAGGCTATGTTTCTGCTTGCAGAAGAAGCATGGCACAGGCTCTGAAGATGGTGGAGATGATGATGAAGACACGGTGGATCCTGGTGACTCTGGTAATTTGTTGTTTGAGTTGAATACTCTTCAGCTTGCTACTAATTTCTTCTCTGAGCTTAATCAACTTGGTCGTGGTGGCTTTGGTCCTGTTTTTAAGGGTTTGATGCCAAATGGTGAAGAAGTAGCTATCAAAAAGCTGTCAATGGAATCTAGACAAGGAATTAGAGAATTTACCAACGAAGTTAGGCTATTGCTAAGAATTCAGCACAAGAATTTAGTCACTTTACTAGGTTGTTGTGCAGAAGGACCCGAGAAAATGCTTGTCTACGAGTATCTACCAAACAAAAGCCTTGACCACTTTCTATTTGATAAAAAAAGGTCTTTGGATTGGATGACACGGTTTCGAATAGTTACCGGTATTGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCGGAAAGAATTATTCACAGAGACATTAAGGCTAGTAACATATTGCTTGATGAGAAATTAAATCCAAAAATTTCAGACTTTGGTTTGGCAAGGCTGTTTCCTGGAGAGGACACTCACGTGCAAACGTTTAGGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGTGGATATCTTTCTGTAAAGACTGATGTTTTCAGTTATGGAGTCTTGGTGTTGGAAATAGTTAGCGGGAGAAAAAACCATGATCTGAAGCTTGATGCAGAAAAGGCAGATCTTCTAAGCTATGCATGGAAACTTTATCAAGGAGGGAAGATTATGGATTTAATAGACCAAAACATTGGTAAATACAATGGCGATGAGGCTGCAATGTGCATTCAACTAGGTTTATTATGCTGTCAAGCAAGTTTAGTAGAAAGACCTGACATGAATTCAGTTAATCTTATGCTATCAAGTGATTCCTTCACTTTGCCAAGACCAAGTAGACCAGGAGTTCAAGGTCGTGTCGGAAAATGGAATACAACCACAACTTCTGCTTTGTCCAATACTAATGGTAGTACTGCAACAAGAGCTTCAGGTGGTAGTAGTTTTGTAGAAGATTATTCTAGAAATTCTATCTCTACTTCTTCTTTTGATGAAGGTAGATAA 1155 0.3965 MFFSRLCFCLQKKHGTGSEDGGDDDEDTVDPGDSGNLLFELNTLQLATNFFSELNQLGRGGFGPVFKGLMPNGEEVAIKKLSMESRQGIREFTNEVRLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKKRSLDWMTRFRIVTGIARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNHDLKLDAEKADLLSYAWKLYQGGKIMDLIDQNIGKYNGDEAAMCIQLGLLCCQASLVERPDMNSVNLMLSSDSFTLPRPSRPGVQGRVGKWNTTTTSALSNTNGSTATRASGGSSFVEDYSRNSISTSSFDEGR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2167 384 Gene3D Phosphorylase Kinase; domain 1 23 126 - -
Mtr6g2167 384 CDD STKc_IRAK 57 319 - -
Mtr6g2167 384 SMART serkin_6 51 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2167 384 Pfam Protein tyrosine and serine/threonine kinase 54 251 IPR001245 GO:0004672|GO:0006468
Mtr6g2167 384 MobiDBLite consensus disorder prediction 328 384 - -
Mtr6g2167 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mtr6g2167 384 SUPERFAMILY Protein kinase-like (PK-like) 39 332 IPR011009 -
Mtr6g2167 384 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 382 - -
Mtr6g2167 384 MobiDBLite consensus disorder prediction 337 384 - -
Mtr6g2167 384 ProSiteProfiles Protein kinase domain profile. 51 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2167 384 Gene3D Transferase(Phosphotransferase) domain 1 127 325 - -
Mtr6g2167 384 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2167 Mtr-Chr6 38761928 38766412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2167 6 333 Receptor kinase-like Gene Family AT4G21410 49.855 6.87e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g2167 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2167 - - aprc:113868075 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2167 6 38761928 38766412 Mtr6g2167 6 38761928 38766412 ECH