Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2162 ATGGCTATGCAATCATCTTCCTCTTCCTCTTCAATTTCCTATGTATTCAAATACCAAGTATTCCTTAGTTTCAGGGGAAGTGACACTCGGTATGGTTTCACCGGCAATCTCTACAAGGCTCTTACTGACAAGGGAATCCACACCTTCATTGATGATAGTGAACTTCAAAGAGGGGATGAAATCACACCATCACTCGACAATGCCATTGAAGAGTCTAGGATTTTTATCCCCGTGTTTTCTGCCAACTATGCCTCTTCGTCGTTTTGTTTGGACGAACTTGTCCACATCATTCACTTGTATAAGCAAAATGGTCGCCTCGTTTTGCCCGTTTTCTTTGGCGTGGATCCTTCTCATGTGCGACATCATAGAGGTAGTTATGGAGAAGCATTGGCTAAGCATGAAGAGAGGTTCCAACATAATACAGATCATATGGAAAGGTTGCAAAAATGGAAGATAGCTCTTACTCAAGCAGCTAACTTGTCTGGCGACCATCGTTCTCCTGGATATGAATACAAGCTTACTGGGAAGATAGCTTTTAATCAGACACCAGACTTGTCAAGTGATTGTAGTCAGAGATATGAATATGATTTTATTGGAGACATAGTCAAATACATCTCCAACAAGATCAATCGTGTGCCCTTACATGTTGCCAATTACCCTGTTGGATTTAAGTTTCGAATACAACAAGTGAAATTGCTTCTTGATAAGGAAACTAATAAAGGGGTACACATGGTAGGACTTTATGGGATAGGAGGCTTGGGTAAATCAACACTTGCAAGAGCAATCTATAATTTTATTGGTGATCAATTTGACGGATTATGTTTTCTTCATGATGTGAGAGAGAATTCAGCTAAAAATAACTTGAAACATCTCCAAGAGAAGCTCCTTTTGAAAACAATTGGATTGGAAATTAAGTTAGACCATGTTAGTGAGGGAATTCCAATCATTAAGGAAAGGCTATGTAGAAAGAAGATTCTTTTGATTCTCGATGATGTTGACAATATGAATCAACTGCATGCTTTGGCTGGAGGACTTGATTGGTTCGGCCGTGGAAGCAGAGTCATCATTACCACTCGAGACAAACACTTACTAAGTAGTCATGGGATAAAAAGTACACATGCAGTAGAAGGGTTGAATGGGACTGAAGCTCTTGAATTGTTAAGGTGGATGGCTTTTAAAAGTGACAAAGTTCCTTCAGGTTACGAAGACATTTTAAACCGTGCAGTTGCATATTCTTCTGGCCTTCCATTAGTTATAGAAGTAGTGGGTTCAAACTTGTTTGGAAAGAGCATAGAAAAATGGAAGAGTACATTAGATGGGTATGACAAGATTCCCAATAAAGAGATCCAAAAGATACTTAAAGTAAGCTATGATGCTTTGGAAGAAGAGGAGCAGAGTGTCTTTCTGGACATTGCTTGTTGCTTCAAAGGATGCGGATGGGCGGATGTCAAAGATATACTCCATGCTCATTATGGCCATTGCATAACACATCATCTAGAAGTGTTGGCTGAAAAATCTCTCATAGACCGTTGGGAATATGATGGTTGTGTGGGATTACATGACTTGATAGAGGACATGGGTAAAGAAGTCGTCCGACAAGAATCACCTAAAGAGCCAGGAGAAAGAAGTAGGCTATGGTGTCAAGATGATATAGTTCATGCTTTAAATGAAAACACTGGAACTAGTAAAATTGAAATGATATATATGAATTTCCACTCCATGGAATCCGTAATAGACCAGAAAGGAATGGCCTTCAAGAAGATGACAAAACTTAAAACACTAATCATTGAAAATGGCCATTTTTCCAATGGACTCAAGTATCTTCCAAACAGTTTGAGAGTATTGAAATGGAAAGGATGTTTATTGGAGTCTCTATCATCTAGTATTTTAAGCAAGAAGTTCCAGAATATGAAAGTCTTGACATTGGACGATTGTGAATATTTAACACATATACCTGATGTCTCAGGTCTTTCAAATATAGAGAAGTTCTCATTTAAATTTTGTAGAAATTTAATTACAATTGACGATTCAATTGGCCACCAAAATAAACTTGAATTCATAAGTGCAATTGGTTGCAGCAAGCTCAAGCGTTTTCCACCCTTAGGTTTGGCATCTCTTAAGGAATTGGAACTCTCTTTTTGTGTGAGTCTCAATAGTTTTCCAGAATTATTATGCAAGATGACAAATATAAAACGTATTTTGTTTGTTAATACTTCCATAGGAGAATTGCCATCTTCATTTCAAAATCTCAGTGAACTTAATGACATATCAATAGAGAGATGTGGAATGCTGAGGTTCCCAAAACATAATGACAAAATTAATTCTATAGTGTTTTCAAATGTGACACAGCTTAGTCTCCAAAATTGCAACCTCTCAGATGAATGTTTACCAATACTTCTCAAGTGGTTTGTTAATGTGAAAAGGCTAGACTTATCGCATAACTTCAATTTCAATATTCTTCCCGAGTGTCTTAATGAATGTCACCTTATGAAGATCTTTGAATTCGATTGTTGCAAGTCTCTTGAGGAAATTAGAGGGATTCCACCAAATCTTGAAGAGCTTTCCGCTTATAAATGTGAATCGTTGAGTTCCTCAAGTAGAAGAATGTTAACGAGTCAGAAACTACATGAGGCTGGAGGCACTGAATTTTATTTCCCAAATGGAACAGATGGGATTCCAAATTGGTTTGAGCACCAAATCAGGGGACAAAGCACAATTACTTTCTGGTTTCGTAAAAAGATCCCTTCTATTACTTATATTCTTCTTTCTCCAGAACACTGGTTGGGTTACCCAAAAGTCAATATTTTTGTGAATGGATATGAAATTGAGATAGATATTACCTTGAAGTTTGGGATCTCAGACCATACACTTTTGTTTGATCTGAAATTGGAAGAACATAATAAACGCTTGAGAAGAATTTATGGGATTAAGTACGAGTCTGAAATGGACAAAGCACTTTTGGAAAATGAATGGATCCGTGTGGAGCTTGAGTTGAAGAGTTTCAATCTTAGTGAGGAAGAGAAGAATGAAATGTTAAGGAGTGCACAAATGGGAATCCACGTGTTAAAGGAGAAAAACAACGCAGAGGAGGAGAATGTGATATTCACCGATCCATATAGAGAGACAAAATCTCAAAAGAAAAGGAAACAAAACATGTTTTCAATTCTTATGGAATATAATGAATTGTGA 3189 0.3728 MAMQSSSSSSSISYVFKYQVFLSFRGSDTRYGFTGNLYKALTDKGIHTFIDDSELQRGDEITPSLDNAIEESRIFIPVFSANYASSSFCLDELVHIIHLYKQNGRLVLPVFFGVDPSHVRHHRGSYGEALAKHEERFQHNTDHMERLQKWKIALTQAANLSGDHRSPGYEYKLTGKIAFNQTPDLSSDCSQRYEYDFIGDIVKYISNKINRVPLHVANYPVGFKFRIQQVKLLLDKETNKGVHMVGLYGIGGLGKSTLARAIYNFIGDQFDGLCFLHDVRENSAKNNLKHLQEKLLLKTIGLEIKLDHVSEGIPIIKERLCRKKILLILDDVDNMNQLHALAGGLDWFGRGSRVIITTRDKHLLSSHGIKSTHAVEGLNGTEALELLRWMAFKSDKVPSGYEDILNRAVAYSSGLPLVIEVVGSNLFGKSIEKWKSTLDGYDKIPNKEIQKILKVSYDALEEEEQSVFLDIACCFKGCGWADVKDILHAHYGHCITHHLEVLAEKSLIDRWEYDGCVGLHDLIEDMGKEVVRQESPKEPGERSRLWCQDDIVHALNENTGTSKIEMIYMNFHSMESVIDQKGMAFKKMTKLKTLIIENGHFSNGLKYLPNSLRVLKWKGCLLESLSSSILSKKFQNMKVLTLDDCEYLTHIPDVSGLSNIEKFSFKFCRNLITIDDSIGHQNKLEFISAIGCSKLKRFPPLGLASLKELELSFCVSLNSFPELLCKMTNIKRILFVNTSIGELPSSFQNLSELNDISIERCGMLRFPKHNDKINSIVFSNVTQLSLQNCNLSDECLPILLKWFVNVKRLDLSHNFNFNILPECLNECHLMKIFEFDCCKSLEEIRGIPPNLEELSAYKCESLSSSSRRMLTSQKLHEAGGTEFYFPNGTDGIPNWFEHQIRGQSTITFWFRKKIPSITYILLSPEHWLGYPKVNIFVNGYEIEIDITLKFGISDHTLLFDLKLEEHNKRLRRIYGIKYESEMDKALLENEWIRVELELKSFNLSEEEKNEMLRSAQMGIHVLKEKNNAEEENVIFTDPYRETKSQKKRKQNMFSILMEYNEL* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2162 1062 SUPERFAMILY L domain-like 585 888 - -
Mtr6g2162 1062 Gene3D - 15 208 IPR035897 -
Mtr6g2162 1062 PANTHER ARCHAEAL ATPASE 28 998 - -
Mtr6g2162 1062 SUPERFAMILY "Winged helix" DNA-binding domain 447 555 IPR036390 -
Mtr6g2162 1062 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Mtr6g2162 1062 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 998 IPR044974 GO:0006952
Mtr6g2162 1062 Pfam TIR domain 17 211 IPR000157 GO:0007165
Mtr6g2162 1062 Pfam NB-ARC domain 227 460 IPR002182 GO:0043531
Mtr6g2162 1062 Gene3D Ribonuclease Inhibitor 703 877 IPR032675 -
Mtr6g2162 1062 Gene3D Ribonuclease Inhibitor 553 702 IPR032675 -
Mtr6g2162 1062 PRINTS Disease resistance protein signature 244 259 - -
Mtr6g2162 1062 PRINTS Disease resistance protein signature 319 333 - -
Mtr6g2162 1062 PRINTS Disease resistance protein signature 412 426 - -
Mtr6g2162 1062 PRINTS Disease resistance protein signature 701 717 - -
Mtr6g2162 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 471 IPR027417 -
Mtr6g2162 1062 CDD AAA 221 360 - -
Mtr6g2162 1062 Gene3D - 209 371 IPR027417 -
Mtr6g2162 1062 SMART AAA_5 241 381 IPR003593 -
Mtr6g2162 1062 Gene3D - 377 461 IPR042197 -
Mtr6g2162 1062 ProSiteProfiles TIR domain profile. 16 209 IPR000157 GO:0007165
Mtr6g2162 1062 SMART till_3 17 160 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2162 Mtr-Chr6 38694716 38700970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2162 7 759 WRKY Transcription Factor Family AT4G12020 27.250 5.74e-60 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2162 - - mtr:MTR_6g071935 1324.69