Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2160 ATGGCTACTAAAAGGGTTTTTGATGATTCTAATGATAAAGATCAAGACAATCCAAACGACAAACGAATGAGATCATCTACTAGTCGACCTTCTTTTGCTTCTGTAATAGAAACAGCAGTTAAAGTGCAAAATATGCAGAACTTTTTAGGAGCTTTGGAACCTTTTCTTAAAAGAGTGGTGAGTGAAGAGGTAGATAGAGCAATTGGAAAGTGCTGTCCATCTTCCATCAACAGGTCACCTTCATTAAGAATCCAAGCACCAAGGGATCAACAACCAACCTTACAACTCTCATTCAGCAAAAGGCTTTCCCTCCCAATTTTCACCGGTAGTAGAATACTCGACGCTGAAGGTAAGCCTATCTGCATAAGTCTTGTTGACAAAACAAACAATAACCAAATTGTTCAAACAAGTCTTCCTTACCCTATAAAGCTAGAGATTGTTGTACTTGATGGAGATTTTCCACATGATGAAAACGAGAATTGGACTAGTGAAGAATTCAATAAAGACATAGTGAAGGAAAGACCTGGGAAGAGACCATTACTTTCTGGAGAATTGAACCTTACTATGAGAGGTGGAATTGCACCAATTGGGGACATAGAGTTCACAGATAATTCTAGCTGGATAAAGTGCAGGAAATTTAGGGTTGCAGTTAAGGTGAATCATGGGAGTAATCAAAGTGTTAGGATTCAAGAAGGCATGACTGAGGCATTTGTTGTTAGGGATCATCGTGGAGAATTGTACAAAAAACACCACCCACCAATGCTTAGCGATGATGTGTGGCGCCTAGAGAAGATAGGGAAAGATGGAGCTTTCCACCACAAAATGATGGCTAAGGGGATCATAACAGTGCAAGACTTTCTTAAATTAGCAGCTATTGATACTCCAAAGCTAAGAGAGATTTTGGGCATAGGGATGTCTGATAAAATGTGGAAAGTCACAATGAAGCATGCAATGACTTGTGACATGGGGAGCAAGATCTATAGATACCGTGGACCTCAATTTATCATTCTTCTGAATCCAATATGTAAATTTATCAAAGCTAATATCAATGGACAAGAATTTTCCAGCAGAGAGTACTTGAGCCAAATGAATAAGAGCTATATAGACAAATTGGTGGGAGAAGCATACACAAAATGGCATGAGTTGGAGGAAATTGATGGGGTTTTAAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAATTGTGGAGCAATATCCAAACAATCATCCAGCAACAGTAGCAACAACATATCATCAGAATCAATATTATGGTGATCCATCTATAGAAAATATTGCTAGCTATGTACCAAGCAATAATGCACAAATGGTTAGTGGTGAGTGGTTACCAAATGCAAATGGATTTCCTTTTGGCTTCACAGGTTCACAATCAGATGGGGACATGACACCTTCAAGTTCTGTCCCTAGGGACATTAATGGGTTCACAAGACAACTTTAG 1458 0.3882 MATKRVFDDSNDKDQDNPNDKRMRSSTSRPSFASVIETAVKVQNMQNFLGALEPFLKRVVSEEVDRAIGKCCPSSINRSPSLRIQAPRDQQPTLQLSFSKRLSLPIFTGSRILDAEGKPICISLVDKTNNNQIVQTSLPYPIKLEIVVLDGDFPHDENENWTSEEFNKDIVKERPGKRPLLSGELNLTMRGGIAPIGDIEFTDNSSWIKCRKFRVAVKVNHGSNQSVRIQEGMTEAFVVRDHRGELYKKHHPPMLSDDVWRLEKIGKDGAFHHKMMAKGIITVQDFLKLAAIDTPKLREILGIGMSDKMWKVTMKHAMTCDMGSKIYRYRGPQFIILLNPICKFIKANINGQEFSSREYLSQMNKSYIDKLVGEAYTKWHELEEIDGVLNDNIALLTQGDQIVEQYPNNHPATVATTYHQNQYYGDPSIENIASYVPSNNAQMVSGEWLPNANGFPFGFTGSQSDGDMTPSSSVPRDINGFTRQL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2160 485 Pfam Calmodulin binding protein C-terminal domain 325 385 IPR046829 -
Mtr6g2160 485 PANTHER PROTEIN, PUTATIVE-RELATED 1 476 - -
Mtr6g2160 485 MobiDBLite consensus disorder prediction 1 30 - -
Mtr6g2160 485 Pfam Calmodulin binding protein-like N-terminal domain 94 242 IPR046831 -
Mtr6g2160 485 Pfam Calmodulin binding protein central domain 254 320 IPR046830 -
Mtr6g2160 485 MobiDBLite consensus disorder prediction 463 485 - -
Mtr6g2160 485 PANTHER OS02G0177800 PROTEIN 1 476 IPR012416 GO:0005516
Mtr6g2160 485 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2160 Mtr-Chr6 38659936 38665618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2160 9 387 Calmodulin-binding Proteins AT5G57580 47.273 1.26e-113 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2160 - - gmx:100792405 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2160 6 38659936 38665618 Mtr6g2160 6 38659936 38665618 ECH
Mtr8g3764 8 48148636 48151726 Mtr6g2160 6 38659936 38665618 PCT