Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2156 ATGAATAAGGAATGTTTAAGGTGTCTGGGATTTGAAGATAAAGATTGTGGATTGAAGAACAATAGTGATATTGAGAAATATGCAGTGTCCTCTTGCTATTATGATAAATGTCCACATGGATCTAGTGAGTTTTCAACAAACTGTTATCCTATTCACAAAAGTAAGGAGTTGAGCTGGCAAGGGAAAATGAAAATTATCGCAGGAAGTGCAGGTGCAACATTTGTAGGATTATCGATATGTATCGCTATCTTTTATTTCACATACAAGTCCATAAAGAATAATCAAGACAAAAAGATTAACCAAGACATCGAAGCATTCTTAAAAACTAATGAAGATTTTACTATAAGACGATACAAATTCTCGCATATCAAGAAAATGACTAACAACTTCGAAGTCAAACTAGGACAAGGTGGTTATGGTACAGTATACAAAGGAAAGCTACTCAATGACCGCCTTGTGGCCGTGAAGATATTAAACGCATCCAAAGGAAAAGGTGAAGAATTTATGAACGAGGTTTCTAGCATAACAAAAACCTCTCACGTTAATGTTGTTGCCCTTCTTGGATTTTGTTTTGACGGTCGCAAAAAAGCCCTGATCTATGAATTCATGTCTAATGGTTCGCTTGACAAATTTATTTACAACGCGCAACATGAAACCTATCAATCTCTGAGTTGGGAGATTCTTTATGAAATTGCTAAAGGGATAGCTCGAGGGTTGGAGTACCTGCATAGAGGATGCAGTACTCGAATTTTACATTTTGATATAAAACCACATAATATTTTATTAGATGAAAATTTTTGTCCAAAGATATCAGATTTTGGACTTGCAAGACTTTGTCTCAAGAAAGAAAGCATTATTTCGATGTCAGGTGCTAGAGGAACGATGGGATATGTAGCTCCTGAGTTGTGGAATAGAAACTTTGGAGGCGTTTCGTACAAGTCTGATGTTTATAGTTACGGAATGATGTTGTTGGAAATAATCGGAGGAAGGAAAAACATTAGTGCCAATGCAAGTCATACAAGTGAGAAATACTTTCCTGATTGGGTATACAAAAGGTTTGATCTAGACACTGATTTGAGACACGATGAAGTGATTGCCACAGATGATGACATCGCAAAGAGAATGACCATAGTAGGATTATGGTGCATTCAAACACTTCCAAATGATAGACCTGCAATGAGTAGAGTTATTGAAATGTTAGAAGGCAATGTGAGTTCATTGGAAATACCCCCAAAACCTATTCTTTCTTCTCCTACTAGACCAGTACCAAAATCGTCAGCTTCATGA 1287 0.3652 MNKECLRCLGFEDKDCGLKNNSDIEKYAVSSCYYDKCPHGSSEFSTNCYPIHKSKELSWQGKMKIIAGSAGATFVGLSICIAIFYFTYKSIKNNQDKKINQDIEAFLKTNEDFTIRRYKFSHIKKMTNNFEVKLGQGGYGTVYKGKLLNDRLVAVKILNASKGKGEEFMNEVSSITKTSHVNVVALLGFCFDGRKKALIYEFMSNGSLDKFIYNAQHETYQSLSWEILYEIAKGIARGLEYLHRGCSTRILHFDIKPHNILLDENFCPKISDFGLARLCLKKESIISMSGARGTMGYVAPELWNRNFGGVSYKSDVYSYGMMLLEIIGGRKNISANASHTSEKYFPDWVYKRFDLDTDLRHDEVIATDDDIAKRMTIVGLWCIQTLPNDRPAMSRVIEMLEGNVSSLEIPPKPILSSPTRPVPKSSAS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2156 428 SUPERFAMILY Protein kinase-like (PK-like) 110 401 IPR011009 -
Mtr6g2156 428 ProSiteProfiles Protein kinase domain profile. 128 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2156 428 Gene3D Transferase(Phosphotransferase) domain 1 203 408 - -
Mtr6g2156 428 PANTHER RUST RESISTANCE KINASE LR10-RELATED 60 428 IPR045874 GO:0004672
Mtr6g2156 428 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 60 428 - -
Mtr6g2156 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mtr6g2156 428 SMART serkin_6 128 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2156 428 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Mtr6g2156 428 Gene3D Phosphorylase Kinase; domain 1 99 202 - -
Mtr6g2156 428 Pfam Protein tyrosine and serine/threonine kinase 131 400 IPR001245 GO:0004672|GO:0006468
Mtr6g2156 428 CDD STKc_IRAK 134 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2156 Mtr-Chr6 38617339 38620951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2156 22 425 Receptor kinase-like Gene Family AT5G38280 50.000 2.78e-128 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr6g2156 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2156 - - gmx:100792936 516.924