Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2153 ATGGATAACGAATTTGAGAGGAAACCTCGACTAGGAAAACAATTTAATACTTGGGAAGAGGCAAGGGATTTTTGGAATGATTATGGTGGAAAAATTGGATTTAATGTTAGAACAGAATACTTGAACAAAAGCAAAGATGGAATGGTTTTGTCTGGAAGATTTGTGTGTAGTAAAGAAGGTTTTCGTAAACCAGATAAAAGAGACTGCTTAACAACTAATCATCGGCTTGAAACAAGAACTGGATGCCCTGTAAAGATGGGAATCAAATACATAAAAGATATTGGAAAGTATCAAATTCATGATTTGTTTGATGAGCATAATCATCAACTGCACCTTCCTGAGACGACTCACATGCTTGCATCTCAACGAAAATTATCTGAAATTCAAGCACATGAGATTGACTTGGCAGATGATGCAGGAATCAAGCAAAGGTCTTTATTTGAGCTAATGAGTAGGCAAGTTGGTGGTAGAGAGAACCTTGGTTACACACGCGTGGATCAAAAGAATTATCTTCGCAACAAGAGGAAGAGAAACATGGCATACGGGGAGGCTGGCAGTATATTACACCACTTTCAACAAAAGTGTGTAGAAAATCCATCATTTTATCATGGAGTCCAATTAGATGTTGAAGAACAAATAACAAATATTTTTTGGGCTGATGCAAGAATGATAATGGATTATGAATACTTTGGTGATGTAGTCACTTTTGATACTACATATAGTACTAACAATGCATATAGACCTTTGGCTGTATTTGCAGGATTTAATCACTTTAAAAGAGTGGTGATTTTTGGTGCTGCGCTTCTTTACGATGAAACTTCAGCATCTTTTGAATGGCTGTTTAGAGAATTCTTGAAGGCGCATAAGAATAAGAAGCCTCAAACTCTTTTCACAGATCAAGACCCAGCAATGGCTAAAGCTTTGCATGAGGTAATGCCTGAAACATACCATGGTCTATGTTCTTGGCATTTGATGCAAAATGGCATAAAACATCTTGGGGCTAGAATGAATAATGGTTCTAATTTGTTGAGAGACCTTAAGTTTTGCATGTACAAATATGTAGAAAAAGATGATTTTGAAATAGCATGGGATAAATTGGTTGATGATTATGATCTTCAAAAAAGTGGGTGGATAACAAGTTTGTATAAAATAAAAGAGAAGTGGGCTAAATGTTATATGAAGAATGCTGTGACTATTGGCATGCGAAGTACACAACTTAGTGAAAGCTTCAATGCAGATTTGAAATCTTGCTTGAAACCAGACTTGGACATCATCCAATTTTTCAAACACTTTGATAGAGTGGTCAATGACAAAAGGTATAATGAGTTGCAATGTGAATTTGAGTCTAGGCAAAAATTACCAAGGTTGAAGATGGAGCATTCACCTTTACTGCAACAAGCTGCACAAACATATACATTACCTATGTTTGATCTTTTTCAAAAAGAATATGACAAATACTCTGCAGCTTACATAAAAAAATTAAAAGAAGGTGAAACTACTTATGAATATTTTATTGGTATGCATAAGGAGGATGAAGAGTTCAAAGTTTTGTTTGATCCTTCCATTGACATGATTTCGTGCAGCTGTAAAATTTTTGAAAGTTTTGGCATTTTGTGTTGTCATGCAATCAAGGTTCTTGATGTGAAAGATATCAAATCAATCCCTAACCAATATATTTTGAAAAGGTGGACAAGGGAAGCAAAGATTGGATGTGTTAAAGATACACATGGAAGAAATGTCCAAGAAGATGTTAATCTTGATAGCGCACAATGGTATAGAGAGGTTTGTCCTAAATTAGTGAGAATAGCTACAAGCGCGTCTGATTGTAAGGAAGCACGTATCTTTGTAGAGAATGCTATTAGGGAGTTGAGTAAGCAAGTTTATGACATTTGCGGTAAGAACTTGAAATATCAAACTTCTCCAAATAAACTGTCTCCAATTCTTTCTGGCATTTCACAAATTCAGAAACAGTACTATTCAATAAACAATATTGAATTATAA 2001 0.3503 MDNEFERKPRLGKQFNTWEEARDFWNDYGGKIGFNVRTEYLNKSKDGMVLSGRFVCSKEGFRKPDKRDCLTTNHRLETRTGCPVKMGIKYIKDIGKYQIHDLFDEHNHQLHLPETTHMLASQRKLSEIQAHEIDLADDAGIKQRSLFELMSRQVGGRENLGYTRVDQKNYLRNKRKRNMAYGEAGSILHHFQQKCVENPSFYHGVQLDVEEQITNIFWADARMIMDYEYFGDVVTFDTTYSTNNAYRPLAVFAGFNHFKRVVIFGAALLYDETSASFEWLFREFLKAHKNKKPQTLFTDQDPAMAKALHEVMPETYHGLCSWHLMQNGIKHLGARMNNGSNLLRDLKFCMYKYVEKDDFEIAWDKLVDDYDLQKSGWITSLYKIKEKWAKCYMKNAVTIGMRSTQLSESFNADLKSCLKPDLDIIQFFKHFDRVVNDKRYNELQCEFESRQKLPRLKMEHSPLLQQAAQTYTLPMFDLFQKEYDKYSAAYIKKLKEGETTYEYFIGMHKEDEEFKVLFDPSIDMISCSCKIFESFGILCCHAIKVLDVKDIKSIPNQYILKRWTREAKIGCVKDTHGRNVQEDVNLDSAQWYREVCPKLVRIATSASDCKEARIFVENAIRELSKQVYDICGKNLKYQTSPNKLSPILSGISQIQKQYYSINNIEL* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2153 666 PANTHER OS03G0181600 PROTEIN 8 637 - -
Mtr6g2153 666 Pfam SWIM zinc finger 514 548 IPR007527 GO:0008270
Mtr6g2153 666 ProSiteProfiles Zinc finger SWIM-type profile. 514 550 IPR007527 GO:0008270
Mtr6g2153 666 SMART 26again6 525 552 IPR006564 GO:0008270
Mtr6g2153 666 Pfam MULE transposase domain 233 327 IPR018289 -
Mtr6g2153 666 Pfam FAR1 DNA-binding domain 23 110 IPR004330 -
Mtr6g2153 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 637 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2153 Mtr-Chr6 38517003 38519003 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g2153 MULE 5e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2153 - - ahf:112709060 937.947