Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2152 ATGCCTCCACCTCTTCTTATTCTTCATTGTTCCATCATCATCAACATCTTTCTCTTCCTCTCACTCTTCTTCTTAATCCCAATACATGTCAATAGTGACGGTGAAAGCTACAAATCTTGTGCACCTTTTAGATGTGGAGATTTCACCAACATTAGTTACCCATTTTGGAGTATTAACAACCATCAAAATTATTGTGGTCATCCAAACTTCGGAGTTGATTGTGAACATGGCAACTTGACTATTGAAATCAAGTCACAAAAGTTTCACATCATTGATATAAATCAAACTTCACAAGTTTTGAGGATTGCAAGGTTGGATTTATGGAGTTATGATTCTGCTACTATTGCTTCTTGTCCCAAGAAATATATCAATGTAACCCTAGATTCGGAATTCTTCAATTACACTTCCAATTATGAGAAGTATACGCTATTATATGAGTGTGGTTCTCTTCCCGATCCATACTCGTCTTCTTTGGGTTCAGAAGTTTCTCAATTTATTTCTTGCCTCATAGATGGTAAACCTCGTGATGCATACGTAGTCTCAAGTGCAAAAGTGGCTGATTTCATTTCTTTGGGATGTAAGAATAATATTACAATTCCTGGCCTAAACAGTTCCTTCCTAGAAGACTCAGATTTGGTAACGAATGTTTTAGACCAAGGATTTGAGGTTAAGTGGAGTGGCGTGGAAGAAGACATATGTGATGGTTGCATGAAATCCGGAGGGAGATGTGGATATAATACAACTGAGAATGTGGTTTTGTGTCTATGTCCTAATCAACAATCTTCTGGTTATTGCGGATTTTGCAGCCCCAATTCAACAACTATACCTTTGCCTAATGAGCCCGATTGTAAAAGAACCCGATCGTTTAAATCCGTGATACCACCACCTCTAGAAGCACCATCAAATGAACGAATACCATCAAATGGACAAGTTCCGTTAAATGGACTAACACCGGCAGGGGGTCCAAATTCAAAAGAGTCTAGTAATGATTCGGACCCATGGAACTGGAAGAGGAAACTCGGCATTGGCCTTGCTTCTGGTGTGTTAGGAGCAGCACTTGCCGTGATCACTGGCTTATATTTCTATAAGCGCCGAAAGAATGCAAGTTATGCAAAGTCGTATGTACAGTCTCACAGCTTCTCTTCTGATCCATCTTCGAGGGATATTGAGAGGGGAAGTCAGCACTTTGGAGGAAGCCAAAACTTTGGAGTGCAAGCTTTTACTTATAGTGAGCTTCAAGAAGCCACAAACAACTTTGATCCGTCTAAAGAACTCGGAGAAGGGGGCTTTGGGACAGTGTATTTTGGAAAACTGCATGATGGGCGCAGTGTTGCTGTAAAGAGGTTATACGAGAACAACTACAGAAGAGTTGAGCAATTCATGAATGAAGTTAGGATCCTAGCTAGATTAGTCCATCCAAATCTTGTGTCACTATACGGATGCACTTCACGCCATAGTCGCGAACTTCTGCTTGTGTACGAGTACGTCTCTAATGGAACTGTCGCGGACCATCTTCACGGTAAAAAAGCAAAACATGGAAAACTCTCTTGGCATGTTAGAATGAATATTGCTGTGGAGACAGCAAGTGCATTGAAGTATCTTCATGTTTCTGACATCATTCACCGAGATATCAAAACCAATAATATTCTTCTTGACGCTCATTTTCGTGTAAAAGTAGCCGATTTTGGACTGTCACGCCTTTTTCCAAATGATCAAACTCATGTTTCAACAGCTCCACAAGGGACTCCGGGGTATGTGGATCCTGAGTACCACGAGTGCTATCAACTTACCGATAGAAGTGATGTCTATAGCTTTGGAGTTGTGATGATCGAGTTGATATCCTCTTTGCCTGCTGTCGATATAACAAGGCATAGACATGAAATCAATTTATCCAACATGGCTATCAACCGAATTCAAAATCGAACATTGCATGAAATCGTGGATCCAACCCTCGGTTTTGAATCAGATCCCAAGGTAAAGAAAATGATACATGCTATGGCTGAGTTAGCATTTCAATGCTTGCAAAGCTCAAAAGATATGCGACCTAGTATGGACGAAGTGTTGGAAACTTTAAAGGATATTCAAAGTGATGGTAAGCATAAAAGCCAACCTGAGGTAATTGACATTTCAAAATCAGCTGATGAAGCTGTTTTGCTGAATCATGATCCACCTCCACTATCACCTGATTCAAATATTTTGAGCAATTATACAACACCAAATGCTAGTGGTTAA 2232 0.4023 MPPPLLILHCSIIINIFLFLSLFFLIPIHVNSDGESYKSCAPFRCGDFTNISYPFWSINNHQNYCGHPNFGVDCEHGNLTIEIKSQKFHIIDINQTSQVLRIARLDLWSYDSATIASCPKKYINVTLDSEFFNYTSNYEKYTLLYECGSLPDPYSSSLGSEVSQFISCLIDGKPRDAYVVSSAKVADFISLGCKNNITIPGLNSSFLEDSDLVTNVLDQGFEVKWSGVEEDICDGCMKSGGRCGYNTTENVVLCLCPNQQSSGYCGFCSPNSTTIPLPNEPDCKRTRSFKSVIPPPLEAPSNERIPSNGQVPLNGLTPAGGPNSKESSNDSDPWNWKRKLGIGLASGVLGAALAVITGLYFYKRRKNASYAKSYVQSHSFSSDPSSRDIERGSQHFGGSQNFGVQAFTYSELQEATNNFDPSKELGEGGFGTVYFGKLHDGRSVAVKRLYENNYRRVEQFMNEVRILARLVHPNLVSLYGCTSRHSRELLLVYEYVSNGTVADHLHGKKAKHGKLSWHVRMNIAVETASALKYLHVSDIIHRDIKTNNILLDAHFRVKVADFGLSRLFPNDQTHVSTAPQGTPGYVDPEYHECYQLTDRSDVYSFGVVMIELISSLPAVDITRHRHEINLSNMAINRIQNRTLHEIVDPTLGFESDPKVKKMIHAMAELAFQCLQSSKDMRPSMDEVLETLKDIQSDGKHKSQPEVIDISKSADEAVLLNHDPPPLSPDSNILSNYTTPNASG* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2152 743 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 15 732 - -
Mtr6g2152 743 ProSiteProfiles Protein kinase domain profile. 419 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2152 743 CDD STKc_IRAK 425 694 - -
Mtr6g2152 743 MobiDBLite consensus disorder prediction 727 743 - -
Mtr6g2152 743 Gene3D Transferase(Phosphotransferase) domain 1 496 707 - -
Mtr6g2152 743 SUPERFAMILY Protein kinase-like (PK-like) 401 713 IPR011009 -
Mtr6g2152 743 MobiDBLite consensus disorder prediction 718 743 - -
Mtr6g2152 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Mtr6g2152 743 SMART serkin_6 419 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2152 743 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
Mtr6g2152 743 Pfam Wall-associated receptor kinase C-terminal 185 258 IPR032872 -
Mtr6g2152 743 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 732 IPR044652 -
Mtr6g2152 743 MobiDBLite consensus disorder prediction 288 332 - -
Mtr6g2152 743 Gene3D Phosphorylase Kinase; domain 1 393 495 - -
Mtr6g2152 743 Pfam Protein kinase domain 422 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2152 743 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2152 Mtr-Chr6 38406847 38416713 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2152 320 743 Receptor kinase-like Gene Family AT1G25390 54.688 5.86e-146 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr6g2152 Pkinase 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2152 - - cam:101492618 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2152 6 38406847 38416713 Mtr6g2152 6 38406847 38416713 ECH