Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2149 ATGTCACATCCACAAATGCCCTCCCCTCATCATCTTTTGCCTTTTTCCTTCATCATCAACATCTGTCTCTTACTCTCACTCTTCTTAATTCCAATACATGTCACTAGTGATGTTGAAAGCTTCAAATCTTGTGCACCTTTTAGTTGTGGAAATTTCACCAATATTAGTTACCCATTTTGGAGTATTAACAACCAACAAAATTATTGTGGTCATCCAAACTTCAAACTTGATTGTGAACATGGCAACTTGACTATTGAAATTAAGTCACAAAAGTTTCACATCATTGATATAAATCAAACTTCACAAGTTTTGAGGATTGCAAGGTTGGATTTATGGAGTTATGATTCTGCTACTATTGCTTCTTGTCCCAAGAAATATATCAATGTAACCCTAGATTCGGAATTCTTCAATTACACTTCCAATTATGAGAAGTATACGCTATTATATGAGTGTGGTTCTCTTCCCGATCCATACTCGTCTTCTTTGGGTTCAGAAGTTTCTCAATTTATTTCTTGCCTCATAGAGGATAAACCTCGTGATGCATACTTAATGTCGAGTGCGAAAGTGGCTGATTTCATTGATTTGGGGTGTAAGAATAATATTACAATTCCTGGCCTAAACAGTTCCTTCCTAGAAGACTCGGATTCTGTGGCAAATGTTTTAGACGAAGGATTTGAGGTTAAGTGGAGTGGCGTGGAAGAAGACATATGTGATGGTTGCATGAAATCTGGAGGGAGATGTGGATATAATACAACTGAGAATGTGGTTTTGTGTCTATGTCCTAATCAACAATCATACGGTGATTGCGGATTTTGCCGCCCAAATTTAACAACTATAGTTTTGCCGGATGATCCCGGTTGCAAAAGAACCCGATCATTTAAATCCGTGATACCACCACCTCTAGCAGCACCATCAAATGGACAAATACCATATGATGGACAAATACCATTAAATGGACTAACACCGGCAGGGGGTCCAAATTCAAAAGAGTCTAGTAATGATTCGGGACAATGGAATTGGAAGAGGAAATTCGTCATTGCAGGTGTTGGAAGTGCAGCAATGGTAGCATTGCTGATGTGCATCATAATCTGTTGTTATAGAGGCAAGTCATCGATACTAGTAAAATTTTGGTTTAAGACAAAGAATGATATAAACATTGAAGCATTTTTAAAAGACCATGGAGTTCTATTGCAAAAAAGATATAAGTTTTCAGAAATAAAGAAAATTACAAACTCATTCAAAATTAAAGTTGGTCAAGGGGGTTTTGGTGCGGTGTACAAAGGAAAGTTATTCAATGGTTCTCTTGTAGCAGTGAAGATATTAAATGCATCAAAAGGAAATGGTGAAGACTTTATTAATGAGGTTGCTAGTATTACTAGAACCTCACATGTTAATGTTGTTAACCTTCTTGGATTTTGTTTTGAAGGTTGTAATAAAGCTCTCATATATGAATTTATGTCTAATGGTTCCCTTGACAAATTTATATACAATAAGGAACCTGAAACGATTGCATCTTTAAGTTGGGATAATATGCATCAAATTGCGAAAGGGATAGCCCGTGGGCTAGAATATTTGCATAGAGGATGTGCCACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTAGATGAGAATTTTTGTCCAAAGATCTCAGATTTTGGACTGGCAAAGCTTTGCCTGAAGAAAGACAGCATTGTTTCGATGTCGGATCAAAGAGGGACAATGGGGTATGTAGCTCCAGAAGTGTGGAATAGACATTTTGGAGGAGTTTCACACAAGTCTGATGTTTATAGTTATGGAATGATGTTGTTAGAAATGGTGGGTGGACGGAAAAATATTAATGCGGATGCAAGTCACACAAGTGAGATATACTTTCCTCATTGGGTATACAATAGGCTTGAACTTGGTAGTTATTTGAGACCTGATGGGGTAATGGATACGGAAGAAGATGAGATTGCAAAGAGGATGACCATTGTGAGTTTGTGGTGTATTCAAACATTTCCTAATGGCAGACCTACAATGAGTAAAGTAGTTGAAATGTTAGAAGTTGACATTAATTCGTTGGAAATACCACCAAAACCATTGCTTTCGTCTCCTACTAGATCAGTATCAGAGTCTTGCACTTCTTAA 2139 0.3698 MSHPQMPSPHHLLPFSFIINICLLLSLFLIPIHVTSDVESFKSCAPFSCGNFTNISYPFWSINNQQNYCGHPNFKLDCEHGNLTIEIKSQKFHIIDINQTSQVLRIARLDLWSYDSATIASCPKKYINVTLDSEFFNYTSNYEKYTLLYECGSLPDPYSSSLGSEVSQFISCLIEDKPRDAYLMSSAKVADFIDLGCKNNITIPGLNSSFLEDSDSVANVLDEGFEVKWSGVEEDICDGCMKSGGRCGYNTTENVVLCLCPNQQSYGDCGFCRPNLTTIVLPDDPGCKRTRSFKSVIPPPLAAPSNGQIPYDGQIPLNGLTPAGGPNSKESSNDSGQWNWKRKFVIAGVGSAAMVALLMCIIICCYRGKSSILVKFWFKTKNDINIEAFLKDHGVLLQKRYKFSEIKKITNSFKIKVGQGGFGAVYKGKLFNGSLVAVKILNASKGNGEDFINEVASITRTSHVNVVNLLGFCFEGCNKALIYEFMSNGSLDKFIYNKEPETIASLSWDNMHQIAKGIARGLEYLHRGCATRILHFDIKPHNILLDENFCPKISDFGLAKLCLKKDSIVSMSDQRGTMGYVAPEVWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINADASHTSEIYFPHWVYNRLELGSYLRPDGVMDTEEDEIAKRMTIVSLWCIQTFPNGRPTMSKVVEMLEVDINSLEIPPKPLLSSPTRSVSESCTS* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2149 712 SUPERFAMILY Protein kinase-like (PK-like) 398 685 IPR011009 -
Mtr6g2149 712 ProSiteProfiles Protein kinase domain profile. 411 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2149 712 SMART serkin_6 411 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2149 712 Pfam Wall-associated receptor kinase galacturonan-binding 44 108 IPR025287 GO:0030247
Mtr6g2149 712 Gene3D Transferase(Phosphotransferase) domain 1 486 692 - -
Mtr6g2149 712 PANTHER RUST RESISTANCE KINASE LR10-RELATED 337 712 IPR045874 GO:0004672
Mtr6g2149 712 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Mtr6g2149 712 Pfam Protein kinase domain 416 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2149 712 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Mtr6g2149 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Mtr6g2149 712 Pfam Wall-associated receptor kinase C-terminal 189 262 IPR032872 -
Mtr6g2149 712 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 337 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2149 Mtr-Chr6 38378364 38382426 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2149 44 711 Receptor kinase-like Gene Family AT1G66910 37.305 4.99e-135 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr6g2149 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2149 - - gmx:102665158 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2149 6 38378364 38382426 Mtr6g2149 6 38378364 38382426 ECH