Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2147 ATGGATAAGCATATCCCTATGCTCTTGAATATTACATACATATCCTTTTTCTTCTTATTAGTAATAATAACCACTTTTTTTCCACATCAATCCCACTCTCAACCACAACAACCTCAACCTGATTACAATTATCGAAGTTGCAGAGACATCAAAAACTTCTACAACTGCGGAAGAATCACCAACATCTCTTATCCGTTCTGGGGACAAAATCGTCTTTCTCCTTGTGGAGCTGGTAAACCATTTTACCTTAACTGTAAGGAAAATAACATCACTACCATTCTGTTATCCTCACAAAATTTAACAGTACTTGACATCAACATAGAAACACACACCATGAAACTAAAAAGAACAGACCTTGATCAAAATCTTTGTTCTCCTCAATATAATTATACTTATTTGTTTCCACCTCCGTTCCAACATCTCCCAAGTGTCTATAACATCACTATATACTACAATTGTACTCCATCTCCTATTACAAATGAAAAATCTTTATGTAAATCTCCGAATCATGCTTTCTTTAGTGTTGGTAATGAAGATAGGTTGTTGGAAGAATCAAGGAATTGTATGAGTCATATTCATGTGCCAGTAGGAGCAGATTTTCCTGGTGTGAAAGATTATGTTGATTATTTTGATCATGATTTTCTTGAAAATGGTTTGGATAAGGGGTTTGAGTTGAATTATACTATGAAAGAGGAATGCTCAAGGTGTTTGGGAAGTGAAGGAGGAGATTGTAAATGGGAGAGCAATAATGATATTGAGAAACATGTAAAGTCCTCGTGCTATTATGATGATTGTTTAGATGGATCTGTTGATTCTTCCACACAACACTGTTCTAATCACAGAAGTAAGCAAATGAGTTGGCAAGGGAAAATGAAAATCATTCTAGGTGTTGGAAGTGCAGCAATGGCAACCCTGCTAATGGGCATCATAATTTATTGTTTTAGAGGCAAGCCATCTATGCTACAAGTAAAATTTCCATCTAAGACAAATAATGATATAAACATTGAAGCATTTCTAAAAGATCATGGAGCTCTACTGCAAAAAAGATATAAATTTTCAGAAATAAAGAAAATGACAAACTCGTTCAAAATTAAACTTGGTCAAGGGGGATTTGGTGTTGTCTACAAAGGAAAGTTATTGAATGGTTGTCATGTGGCAGTGAAGATTTTGAATGCATCAAAAGGAAACGGTGAAGAATTTATTAACGAGGTTGCTAGTATTACTAGAACCTCACATGTTAATGTTGTCACCCTTCTTGGATTTTGTTTTGAAGGCCGTAAAAAAGCTCTTGTATATGAATTTATGTCCAATGGTTCTCTTGACAAATATATTTACAATAAGGGACCTGAAACCATTGTATCTTTAAGTTGGGATGATATGCATCAAATTGCGAAAGGGATAGCCCGTGGGCTAGAATATTTGCATAGAGGATGTGCGACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTAGATGAGAATTTTTGTCCAAAGATCTCAGATTTTGGACTGGCAAAGCTTTGCCTGAAGAAAGACAGCATTGTTTCGATGTCGGATCAAAGAGGGACAATGGGGTATGTAGCTCCCGAAGTGTGGAATAGACATTTTGGAGGAGTTTCACACAAGTCTGATGTTTATAGTTATGGAATGATGTTGTTAGAAATGGTGGGTGGACGGAAAAATATTAATGCGGATGCAAGTCACACAAGTGAGATATACTTTCCTCATTGGGTATACAATAGGCTTGAACTTGGTAGTGATTTGAGACCTGATGGGGTAACTGATACAGAAGAAAATGAGATTGCAAAGAGAATGACCATTGTGGGTTTGTGGTGTATTCAAACATTTCCTAATGGCAGGCCTACAATGAGTAAAGTAGTTGAAATGTTAGAAGTTAACATGAATTCATTGGAAATACCACCAAAACCATTGCTTTCGTCTCCTACTAGATCATTATCAGAGTCTTGCACGTCTTAA 1986 0.3585 MDKHIPMLLNITYISFFFLLVIITTFFPHQSHSQPQQPQPDYNYRSCRDIKNFYNCGRITNISYPFWGQNRLSPCGAGKPFYLNCKENNITTILLSSQNLTVLDINIETHTMKLKRTDLDQNLCSPQYNYTYLFPPPFQHLPSVYNITIYYNCTPSPITNEKSLCKSPNHAFFSVGNEDRLLEESRNCMSHIHVPVGADFPGVKDYVDYFDHDFLENGLDKGFELNYTMKEECSRCLGSEGGDCKWESNNDIEKHVKSSCYYDDCLDGSVDSSTQHCSNHRSKQMSWQGKMKIILGVGSAAMATLLMGIIIYCFRGKPSMLQVKFPSKTNNDINIEAFLKDHGALLQKRYKFSEIKKMTNSFKIKLGQGGFGVVYKGKLLNGCHVAVKILNASKGNGEEFINEVASITRTSHVNVVTLLGFCFEGRKKALVYEFMSNGSLDKYIYNKGPETIVSLSWDDMHQIAKGIARGLEYLHRGCATRILHFDIKPHNILLDENFCPKISDFGLAKLCLKKDSIVSMSDQRGTMGYVAPEVWNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINADASHTSEIYFPHWVYNRLELGSDLRPDGVTDTEENEIAKRMTIVGLWCIQTFPNGRPTMSKVVEMLEVNMNSLEIPPKPLLSSPTRSLSESCTS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2147 661 Pfam Wall-associated receptor kinase galacturonan-binding 55 115 IPR025287 GO:0030247
Mtr6g2147 661 Gene3D Transferase(Phosphotransferase) domain 1 435 642 - -
Mtr6g2147 661 PANTHER RUST RESISTANCE KINASE LR10-RELATED 95 661 IPR045874 GO:0004672
Mtr6g2147 661 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 95 661 - -
Mtr6g2147 661 Pfam Protein kinase domain 365 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2147 661 SMART serkin_6 360 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2147 661 SUPERFAMILY Protein kinase-like (PK-like) 348 635 IPR011009 -
Mtr6g2147 661 Gene3D Phosphorylase Kinase; domain 1 324 434 - -
Mtr6g2147 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Mtr6g2147 661 ProSiteProfiles Protein kinase domain profile. 360 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2147 661 Pfam Wall-associated receptor kinase C-terminal 177 264 IPR032872 -
Mtr6g2147 661 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2147 Mtr-Chr6 38359610 38362845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2147 54 646 Receptor kinase-like Gene Family AT5G38260 40.065 2.66e-134 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr6g2147 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2147 - - gmx:100792936 711.835