Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2146 AAACTTGGTCAAGGGGGTTTCGGTGCTGTGTACAAAGGAAAGCTAGTGAATGGTTCCCTTGTGGCAGTGAAGATGCTAAATGCATCAAAAGGAAATGGTGAAGAATTTATTAATGAGGTTACTAGTATTACTAGAACCTCACATGTTAATGTTGTTACCCTTCTTGGATTTTGTTTTGAAGGTTGCAATAAAGCTCTCATATATGAATTTATGTCTAATGGTTCCCTTGACAAATTTATTTACAATAAGGGACCTGAAACCATTGCATCTTTGAGTTGGGATAATTTCTATCAAATTGCCAAAGGGATAGCTCGAGGTTTGGAGTATTTGCATAGGGGATGTAATACCCGGATTTTACATTTTGATATAAAACCACATAACATTCTTTTAGATGAAAATTTATGTCCAAAGATTTCAGATTTTGGACTTGCAAAGCTCTGTCTCGAGAAAGAGAGCACTATATTCATGTCAAATGCAAGAGGAACAGTCGGATATGTAGCTCCAGAAGTATGGAATAGACAATTTGGAGGAGTTTCACACAAGTCTGATGTTTATAGTTATGGAATGATGCTTTTAGAGATGGTCGGAGTGAGAAACAATATTGATGTTAACACAAATCAAACTAGCGAGTATTTTCCAGATTGGATATACAATAAGCTAGAAAAGGAGAGTGATTTGAGACCTGACATAGTGATGGCCATTGAAGAAAATGAGATTGCAAAAGGAATGACCATTGTTGGTTTATGGTGCATTCAAACATTGCCAAATGATCGACCAACAATGAGTAGAGTGATTGAAATGTTGGAAGGTAGCATGAATGTCCTTGAAATACCACCAAAACCTTTGGTTTCTTCTCCTACTAGATCATTATTGGAATCTTCAACTTCTTGA 891 0.3625 KLGQGGFGAVYKGKLVNGSLVAVKMLNASKGNGEEFINEVTSITRTSHVNVVTLLGFCFEGCNKALIYEFMSNGSLDKFIYNKGPETIASLSWDNFYQIAKGIARGLEYLHRGCNTRILHFDIKPHNILLDENLCPKISDFGLAKLCLEKESTIFMSNARGTVGYVAPEVWNRQFGGVSHKSDVYSYGMMLLEMVGVRNNIDVNTNQTSEYFPDWIYNKLEKESDLRPDIVMAIEENEIAKGMTIVGLWCIQTLPNDRPTMSRVIEMLEGSMNVLEIPPKPLVSSPTRSLLESSTS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2146 296 ProSitePatterns Protein kinases ATP-binding region signature. 2 24 IPR017441 GO:0005524
Mtr6g2146 296 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2146 296 SUPERFAMILY Protein kinase-like (PK-like) 1 269 IPR011009 -
Mtr6g2146 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Mtr6g2146 296 SMART serkin_6 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2146 296 PIRSF ILK 1 276 - -
Mtr6g2146 296 Pfam Protein kinase domain 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2146 296 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 296 IPR045874 GO:0004672
Mtr6g2146 296 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 296 - -
Mtr6g2146 296 Gene3D Transferase(Phosphotransferase) domain 1 72 276 - -
Mtr6g2146 296 Gene3D Phosphorylase Kinase; domain 1 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2146 Mtr-Chr6 38356145 38357255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2146 2 295 Receptor kinase-like Gene Family AT1G66910 58.528 1.38e-123 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr6g2146 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2146 - - gmx:100800335 479.174