Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2145 ATGCCTCCCCCTCTTCATCTTCAGGCTTTTTCCTTCATCATCAACATCTTTCTCTTCCTTGCACTCTTCATAATCCCAATACATATCACTAGTGACGTTGAAAGCTTCAAATCTTGTGCACCTTTTAGTTGTGGAAATTTCACCAACGTTAGTTATCCATTTTGGAGTGTTAACAACCAACCAAGTTATTGTGGCCACCCAAACTTCAACCTTGATTGTGAACATGGCAACTTGACTATTGAGATCAAGTCACAAAAGTTTCACATCATTGATATAAATCAAACATCTCGACTTTTGAGGATTGCCCGGTTGGATTTATGGAGTAATGATGCTGCTACTATTGTTTCTTGTCCCAAGAAATATATCATTGTAAACCTAGATTTGGATTTCTTCAACTACACTTCCAAGTATGAAAAGTATACACTATTGTACGAGTGTGGCCCTCTTCCTGATCCATACTCGTCTTCTTTGAGTTCAGAAGTTTCTCAAGTGATTTCTTGCCTCATAGAGGGTAAACCTCGTAATGCATACTTGGTGTCAAGTGCTAAAGTGGTTGATTTTATTGGTTTGGGATGTATGAATAATATTACAATACCTGGCCTAAAGAGCTCCATCATAGAAGACTCGGATTCTGTGGTTGATGTTTTAGACAAAGGATTTGATGTTAGGTGGAGTGGCGTGGAAGAAGACATATGTGATGGTTGCATAAAATCTGGTGGGAGATGTGGATACAATGCATCTGAGAATGCAGTTTTGTGTATGTGTCCTAATCAAGAGTCTTATGGTGATTGCGGGTTTTGCCGCCTGAAGTCAACAACTGAGATTTTGCCGGATGAGCCTGATTGCAAAAGACTTACGTTACGCAGTCCGAAGGGTAAGCAGCTGAGCTGGAAAGGGAAAATGAAAATCATTCTAGGTGTTGGAAGTGTAGCAATAGTTGCATTGCTGATGTGCATCATAATCTGTTGTTATAGAGGCAAGTCATCGATACTACATGTAAAATTTTGGTTTAAGACAAAGAATGATATAAACATTGAAGAATTTTTAAAAGATCATAGAGCACTATTACAAAAAAGATATAAATTTTCAGAAATAAAGAAAATGACAAACTCATTCAAAATTAAACTTGGTCAAGGGGGTTTTGGTGCTGTGTACAAAGGAAAGTTATTCAATGGTTCTCTTGTAGCAGTGAAGATTTTGAATGCATCGAAAGGAATTGGTGAAGACTTTATTAATGAGGTTACTAGTATTACTAGAACCTCACATGTTAATGTTGTTACCCTTCTTGGATTTTGTTTTGAAGGTTGTAATAAAGCTCTCGTATATGAATTTATGTCTAATGGTTCCCTTGACAAATTTATTTACAATAAGGGACCTGAAACCATTGCATCTTTAAGTTGGGATAATTTGTATCAAATTGCCAAAGGGATAGCTCGAAGTTTGGAGTATTTGCATAGGGGGTGTAATATCCGGATTTTACATTTTGACATAAAACCGCATAACATTCTTTTAGATGAAAATTTATGTCCAAAGATTTCAGATTTTGGACTTGCAAAGCTCTGTCTCAAGAAAGAGAGCACTATTTTCATGTCAAATGCAAGAGGAACAGTCGGATATGTAGCTCCAGAAGTATGGAATAGACAATTTGGAGGAGTTTCACACAAGTCTGATGTTTATAGTTATGGAATGATGCTTTTAGAGATGGTGGGAGTGAGAAACAATATTGATGTTAAAACAAATCAAACTAGCGAGTATTTTCCAGATTGGATATACAATAAGCTAGAAACGGATAGTGATTTGAGATCTGACATAGTGATGGCCATTGAAGAAAATGAGATTGCAAAAGGAATGACTATTGTTGGTTTATGGTGCATTCAAACATTGCCAAATGATCGACCAACAATGAGTAGAGTGATTGAAATGTTGGAAGGTAGCATGAATATCCTTGAAATACCACCAAAACCTTTGGTTTCTTCTCCTACAAGATCATTATTGGAATCTTCAACTTCTTGA 2013 0.3656 MPPPLHLQAFSFIINIFLFLALFIIPIHITSDVESFKSCAPFSCGNFTNVSYPFWSVNNQPSYCGHPNFNLDCEHGNLTIEIKSQKFHIIDINQTSRLLRIARLDLWSNDAATIVSCPKKYIIVNLDLDFFNYTSKYEKYTLLYECGPLPDPYSSSLSSEVSQVISCLIEGKPRNAYLVSSAKVVDFIGLGCMNNITIPGLKSSIIEDSDSVVDVLDKGFDVRWSGVEEDICDGCIKSGGRCGYNASENAVLCMCPNQESYGDCGFCRLKSTTEILPDEPDCKRLTLRSPKGKQLSWKGKMKIILGVGSVAIVALLMCIIICCYRGKSSILHVKFWFKTKNDINIEEFLKDHRALLQKRYKFSEIKKMTNSFKIKLGQGGFGAVYKGKLFNGSLVAVKILNASKGIGEDFINEVTSITRTSHVNVVTLLGFCFEGCNKALVYEFMSNGSLDKFIYNKGPETIASLSWDNLYQIAKGIARSLEYLHRGCNIRILHFDIKPHNILLDENLCPKISDFGLAKLCLKKESTIFMSNARGTVGYVAPEVWNRQFGGVSHKSDVYSYGMMLLEMVGVRNNIDVKTNQTSEYFPDWIYNKLETDSDLRSDIVMAIEENEIAKGMTIVGLWCIQTLPNDRPTMSRVIEMLEGSMNILEIPPKPLVSSPTRSLLESSTS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2145 670 Pfam Wall-associated receptor kinase galacturonan-binding 39 103 IPR025287 GO:0030247
Mtr6g2145 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Mtr6g2145 670 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Mtr6g2145 670 Pfam Wall-associated receptor kinase C-terminal 189 257 IPR032872 -
Mtr6g2145 670 PANTHER - 29 668 - -
Mtr6g2145 670 SMART serkin_6 370 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2145 670 Pfam Protein kinase domain 375 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2145 670 SUPERFAMILY Protein kinase-like (PK-like) 357 643 IPR011009 -
Mtr6g2145 670 Gene3D Transferase(Phosphotransferase) domain 1 445 650 - -
Mtr6g2145 670 ProSiteProfiles Protein kinase domain profile. 370 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2145 670 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 668 IPR045874 GO:0004672
Mtr6g2145 670 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2145 Mtr-Chr6 38342473 38349123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2145 22 669 Receptor kinase-like Gene Family AT5G38260 39.371 6.71e-151 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr6g2145 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2145 - - gmx:102665158 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2145 6 38342473 38349123 Mtr6g2145 6 38342473 38349123 ECH