Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2144 ATGGGGTGGGATCTCTGTATGTGCTGCTGCTTCACTAGCACTTCTGACATATTTCCAAAGCAGAATAAATTGAAGTGGCAAATCTTCCCCTATGAGCTACTTAGGAAAGCCACAAATTATTTTGATGAAGCTCACATTCTTGAAAAGAAAGGCTCTGCCACTATATATTATGGAAAACTTAAGAATGGTTGTGAGATTACAGTCCAATGCTTTAATGAAAACAAGTACCACATATTGAAACAGTTCACCAATGAAGCTGCATTCCTAAATTACATGCCACACAAAAACCTAGTTACGATTTATGGTTATGCCACTCATCAAAAGGAATCCATGATAGTACATGAATACCTGTCCAACGGGACTCTTGCTGCTCATATTCAAGGCCGAATATCAGATAGCGGAACATCATTAACTTGGCTTAGCAGATTAGATATTGCAATCGATATAGCAAATGCATTGGAATATCTTCACTATAACGGCATTGTGCACCGTAATGTAAAGTCTCACAATATTTTCCTTGATATAAATTTTTGTGCTAAAGTTGGTAACTTACATTTGTCAAAGAAACTTGATATTGGAGCAACCCGTGTTACAAGAGACTTAATCGGAGCAAGTGGTTATGTAGACCCAGAACTTGTGTCAAAAGGCTTACTGGGTGTCCAAAATGATGTTTATAGCTTTGGGGTGGTATTGTGTGAGCTTGTGTCATCTATGCTTGCAGAATATTATATTCAGAATGAAGAAGAATGTTTGGCAACCCTTCTACGCAAAAAAGTTGAAAACCAAGCTTTAGTAGAGCTGTTGGATGTAAGACTTGGCTTCGAATCAGACCTTAAGATCAACAAGATGATGAGCGCTACGGCTGAGCTTGCATTTTGGTGTCTGAAATGTCCACAAGAATTAAGGCCTAACATGGAACAAGTGCTAGAGACTCTCCATGGCATAAAGCAAGGGAGATATGAGATAAACTCGATAAAAGCTTTCAAAATCTTCCACCATGCCGAACTTGAAGAAGCTACTAACAAGTTTGACACTTTTTTGGGATCTGGAGGGTTCGGCAGAGTCTACTATGGAAAACTTAAAGACGGTAGAGAGGTTGCAATAAAACGCTTCCATGAAGAGACAGAAAAAACCATTCAGCAGTTCATGAAAGAAATTGAGATCTTAAGTAACCTGCATCATCAAAATCTGGTTTCACTTTATGGTTGCAGTTCTCGTCATAGCAACAAGTACATGCTTGTGTACGAGTACATCTCTAATGGAACTCTTACACAACATCTTCACGAATCTTCATGTAATAAACTATCATGGCTTACTAGATTGAATATTGCCATTGAAACTGCGAACGCCTTGGTATTTCTTCACGATTCAGGTATCATCCATCGTGACATAAAAGGAAGCAATATTCTGCTGGATGAAAATTTTGCAGTTAAAGTTGCAGATTTTGGTCTCTCGCGGTTTCTTCCTGACTATGTGACTCATGTTTCAACTCTTCCGGTGGGAACTCGTGCTTACATTGATCCAGATTACTATGAAACTGGAAGGGTCAGTGAGAAAAGTGATGTCTATAGCTTTGGAGTGATCTTATTCGAGCTTATATCTTCCAAACCAGCAAGTTTAATGCAAGGCACCGAGCGTGTCGCTCTTGCCGAATTTGCATTGAGTAAAATCTTAAACAAGGAATTACAGCTGCTAGTGGACCAAAGTCTTCAAATTTCTTTTAACAAAAATGTAGTGGAAATGATAACAACGGTGACTGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGGCCAACCATGAAACAGGTGTTAGAGACTCTACAGGGCATACGCAAAGGGAAATGGGGCTTCAGCCAAATAACATAG 1875 0.3936 MGWDLCMCCCFTSTSDIFPKQNKLKWQIFPYELLRKATNYFDEAHILEKKGSATIYYGKLKNGCEITVQCFNENKYHILKQFTNEAAFLNYMPHKNLVTIYGYATHQKESMIVHEYLSNGTLAAHIQGRISDSGTSLTWLSRLDIAIDIANALEYLHYNGIVHRNVKSHNIFLDINFCAKVGNLHLSKKLDIGATRVTRDLIGASGYVDPELVSKGLLGVQNDVYSFGVVLCELVSSMLAEYYIQNEEECLATLLRKKVENQALVELLDVRLGFESDLKINKMMSATAELAFWCLKCPQELRPNMEQVLETLHGIKQGRYEINSIKAFKIFHHAELEEATNKFDTFLGSGGFGRVYYGKLKDGREVAIKRFHEETEKTIQQFMKEIEILSNLHHQNLVSLYGCSSRHSNKYMLVYEYISNGTLTQHLHESSCNKLSWLTRLNIAIETANALVFLHDSGIIHRDIKGSNILLDENFAVKVADFGLSRFLPDYVTHVSTLPVGTRAYIDPDYYETGRVSEKSDVYSFGVILFELISSKPASLMQGTERVALAEFALSKILNKELQLLVDQSLQISFNKNVVEMITTVTELAFQCVQCPKELRPTMKQVLETLQGIRKGKWGFSQIT* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2144 624 Gene3D Phosphorylase Kinase; domain 1 329 417 - -
Mtr6g2144 624 SUPERFAMILY Protein kinase-like (PK-like) 19 312 IPR011009 -
Mtr6g2144 624 ProSiteProfiles Protein kinase domain profile. 41 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2144 624 PANTHER TYROSINE KINASE FAMILY PROTEIN 21 624 - -
Mtr6g2144 624 Gene3D Transferase(Phosphotransferase) domain 1 117 328 - -
Mtr6g2144 624 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Mtr6g2144 624 ProSiteProfiles Protein kinase domain profile. 341 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2144 624 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 624 IPR044652 -
Mtr6g2144 624 Gene3D Phosphorylase Kinase; domain 1 16 116 - -
Mtr6g2144 624 SUPERFAMILY Protein kinase-like (PK-like) 324 614 IPR011009 -
Mtr6g2144 624 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mtr6g2144 624 SMART serkin_6 341 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2144 624 SMART serkin_6 41 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g2144 624 Coils Coil 372 392 - -
Mtr6g2144 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Mtr6g2144 624 Pfam Protein tyrosine and serine/threonine kinase 343 610 IPR001245 GO:0004672|GO:0006468
Mtr6g2144 624 Pfam Protein tyrosine and serine/threonine kinase 55 257 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2144 Mtr-Chr6 38333161 38337788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2144 330 614 Receptor kinase-like Gene Family AT1G25390 55.670 2.52e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr6g2144 PK_Tyr_Ser-Thr 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2144 - - gmx:100801413 897.116