Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2099 ATGTCACCACGCACCGACGAATTCGAACAGGATAACACCGACCTCTCCGCCACCTCCTCCGATGACGACGACGACGGTCTCAAAGATGACATGGCAGCTCTGGCACGCGCTTGTACATTCACCGCCGATGAAGACGAAATTGAAGAAGTAGAAGAAGATCCGCTTTTATCCACCGGTGATGCTATTGTCCCTTTCACCGCCAACGAAGATTCTGACCCCGATGATGATCTAGAATGTCTAAAGAGAGTTCAGAGTCTCTACAAACCTACGGGGAATTCTGTTCCTTCGCCATCGCCAGTGCCGATGATAGCTGCTGCGGCTGATGATGATGAGGATGATGAAGATGATTTTGAAACTGTTCGCGCTATTTTCAAACGGTTTTCTGCTTATGATGGAGGTGGAAAGGAAGCATGGGCAGAGGGGGATCAGGCCTCGAGTTTAATGGATGAGCAGGATGTTGTCAAGAGCTCCATTTCTGACAACTCAGATGCCGGTGAATTGTGTCCTGATTCTCAAGACCCTGAGAATAACAGCAAGTTGAAATTTATTAAGCCATGTGGTGCTGACGAGACTTGTAAAAATGATGCGGGCTTGTCTTCTCAATTACCGAAGAAAAGGTCAAGCTTTCCTCCATCGGCCCAAGCTTTTATTGATGCGGTCAAGAAGAATAGAGCTCTCCAGAAATTTCTTAGAAGTAAGTTGATTGAAATTGAAGCAAAAATTGGTGAAAACAAAAAGATAAGGGACAATGTTAAACTCCTTAAGGATTTCCAGGTTTCATGCATTAGAAAAACGGGAAGTGCTTTTTCACTGAGAAAGGACCCGCGTGTGCAGTTAATATCATCCAAAAAGCCTTCTGCATCAAATAAATCAAAGAGCCATAATAAGAAAGCATCTGCAATGTGTTATGGCCCAGACGAGAATTCTCTTGTTGCTAACTATAAGATGGTATTGGAAAGATTTCCGCTTTCATTGCCTAAGAAAAAATGGTCGGATAAGGAAAGGGAGAATCTTTCGAAGGGAATTAAGCAACAATTCCAAGAAACGTTGCTTCAAATTTCAGTAGATAGAATGAGTTCAGAGTGTTTACCTGGAGATGCAAATGACATGGATAACCTTATTGAATCAGTTAAAGGTCTTGAAATCACACCAGCGAGGATTAGAGAATTTTTACCTAAAGTTAATTGGGATCGATTGGCTTCTATGTATGCCACTGGCCGTACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTGTGAAGACCCTTTGATCAACCATGGCCCATGGACTTGTGAAGAGGATAAATCTCTTTTGATTATTGTCCAAGAGAAGGGTATCAGGAACTGGTTTGACATTGCTGTATCATTGGCCACAAACAGGCTTCCATTTCAATGCTTGGCACGATTTCAAAGGAGCTTAAATCCTTCGATTATAAATAGTGAATGGACTGGGGAAGAAGATGCTCAACTTCGTGATGCTGTTGCATGCTTTGGTCAGTGTGATTGGCAGTCTGTAGCTACTTATTTAGAACGGCGGACGGGAACCCAGTGCTCGAATAGATGGAAAAAATCAATTTGTCCTGTGAGGAAAGGGGCCTTTACCTCTGAGGAGGACGAACGCCTTACTGTAGCGGTCATGCTGTTTGGACGGAAATGGAAGCAAATAGCCAAATATGTTCCTGGCCGGATCCAATCTCAGTGTAGGGACAGATACCTTAATAGTTTGGACCCTTCTTTGAAATGGAGTGAATGGACTACAGAAGAGGATTCAAGATTAGAAGCTGCAATCACCAAACATGGATGTTGCTGGTCTAAGGTTGCTGAAGATGTGACTCCCCGCACTGATTGTCAATGCCGGAAGAGATGGATGGTGTTACATCCTGAACAAGCTCATATGCTTAAAGAAGCAAAAAAGAAGCAAAGGTCTCAGCTTTCCAGGAACTTTGTCGATCGAGAATCTGAGCGGCCAACCCTTGCAGTGAATGACTTAATTCCTTTACAAATGGTAGTTCCACGATCTGATGTTGGTGCCGAAAATCTCCGAAAGAAGCGGAAGAGAAAGTCGAGTCACCAGAAAGAGAGGTCCAAAAAACATGCAAAAGAGGCTGGACTTTGTATTGAGGAAGTACAAGATGCAGATCCCAAGAAAGAGAGGCCTAAAAGACATGCAAAAAAGAAGGTACCATTTTGTCCCGAGGAACAAGATATAGTTCCAAAGAAAGAGAGGCCTAAAAGACATTCAAAAAAGGCTCGGATTTGTCCTGAGGAAGGACAATTTATAGCAGCATATAGTGATAAGATGAAGACTTCTGCTCGAGGTGTTCCGTTGTTTGAGCAAAGCAATGTTCACAATAATATGAGATCTAAAAGACATGCTAAAAAGGCTCAAATTCATCTCAAGGAAGTAGAGAATATAGCATTTAATGACAAGGTCAAGACCTGTAGCAAGATTTCAGAAAGTCAAGATGGAGACGACATCACACTTGCATGCTGGCGCAACAAATTAAAGAAGAAACTATCTAATTGTACCAAAAATGCGAGCCAGACTTCGTCTTTCTCTATGCCAAAAATTGTATCTAAGCAGGTTGGAAATCAAATCCCATCTAATGAGCAAGACGGATTGTCTCTTACATGTGGTACTGGTGGAACTGAAGATTTGTTAATCCAAACGGAAGTTGATTCTAGTGAACAGGTGAGAAAACCAGAAAGTGAAAATGCAGCTAGAAAACCAGAGGATGCACATAATATGAATGGTGATGGCAATGATAAGCCTCTTCAGGTCTATGTGAGAAGGAAAACAAAGAAATGGAGTGAAGATACTGAAGGATGCCGTGCTTGCTCTCCTTCCAAATTGAAAAAGGGATCTATGTTACTCCATGGAAACAAGCCAGCCATCATTTCTGATGGCAGTGAACCATCCATGTCAAAAGTTGTTGTAGAGGAGACTGTTTTACATGGTGGTGTGGCTGAAGCCGAACCCACGAACATCAATGTCGTTGAAGAGGAGACTGATCTGCATGGTAGTGTTGCTGATGCTGAACCCACAAACATCAATGTGGAAGAAAATGATGATGACCTTCCTCTTTCCTTCTTGCAAAACAAGACAAGGAGGCGAAAAAGACGGCACACTATTCAGATATGA 3141 0.426 MSPRTDEFEQDNTDLSATSSDDDDDGLKDDMAALARACTFTADEDEIEEVEEDPLLSTGDAIVPFTANEDSDPDDDLECLKRVQSLYKPTGNSVPSPSPVPMIAAAADDDEDDEDDFETVRAIFKRFSAYDGGGKEAWAEGDQASSLMDEQDVVKSSISDNSDAGELCPDSQDPENNSKLKFIKPCGADETCKNDAGLSSQLPKKRSSFPPSAQAFIDAVKKNRALQKFLRSKLIEIEAKIGENKKIRDNVKLLKDFQVSCIRKTGSAFSLRKDPRVQLISSKKPSASNKSKSHNKKASAMCYGPDENSLVANYKMVLERFPLSLPKKKWSDKERENLSKGIKQQFQETLLQISVDRMSSECLPGDANDMDNLIESVKGLEITPARIREFLPKVNWDRLASMYATGRTGAECESRWLNCEDPLINHGPWTCEEDKSLLIIVQEKGIRNWFDIAVSLATNRLPFQCLARFQRSLNPSIINSEWTGEEDAQLRDAVACFGQCDWQSVATYLERRTGTQCSNRWKKSICPVRKGAFTSEEDERLTVAVMLFGRKWKQIAKYVPGRIQSQCRDRYLNSLDPSLKWSEWTTEEDSRLEAAITKHGCCWSKVAEDVTPRTDCQCRKRWMVLHPEQAHMLKEAKKKQRSQLSRNFVDRESERPTLAVNDLIPLQMVVPRSDVGAENLRKKRKRKSSHQKERSKKHAKEAGLCIEEVQDADPKKERPKRHAKKKVPFCPEEQDIVPKKERPKRHSKKARICPEEGQFIAAYSDKMKTSARGVPLFEQSNVHNNMRSKRHAKKAQIHLKEVENIAFNDKVKTCSKISESQDGDDITLACWRNKLKKKLSNCTKNASQTSSFSMPKIVSKQVGNQIPSNEQDGLSLTCGTGGTEDLLIQTEVDSSEQVRKPESENAARKPEDAHNMNGDGNDKPLQVYVRRKTKKWSEDTEGCRACSPSKLKKGSMLLHGNKPAIISDGSEPSMSKVVVEETVLHGGVAEAEPTNINVVEEETDLHGSVADAEPTNINVEENDDDLPLSFLQNKTRRRKRRHTIQI* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 675 750 - -
Mtr6g2099 1046 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 528 579 IPR017930 -
Mtr6g2099 1046 CDD SANT 481 523 IPR001005 -
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 895 918 - -
Mtr6g2099 1046 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 19 919 - -
Mtr6g2099 1046 ProSiteProfiles Myb-like domain profile. 421 473 IPR001005 -
Mtr6g2099 1046 Gene3D - 326 422 - -
Mtr6g2099 1046 SMART sant 580 628 IPR001005 -
Mtr6g2099 1046 SMART sant 425 475 IPR001005 -
Mtr6g2099 1046 SMART sant 529 577 IPR001005 -
Mtr6g2099 1046 SMART sant 478 527 IPR001005 -
Mtr6g2099 1046 SMART sant 326 422 IPR001005 -
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 695 718 - -
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 726 741 - -
Mtr6g2099 1046 ProSiteProfiles Myb-like domain profile. 529 575 IPR001005 -
Mtr6g2099 1046 SUPERFAMILY Homeodomain-like 555 626 IPR009057 -
Mtr6g2099 1046 Gene3D - 426 478 - -
Mtr6g2099 1046 SUPERFAMILY Homeodomain-like 476 571 IPR009057 -
Mtr6g2099 1046 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 584 630 IPR017930 -
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 156 176 - -
Mtr6g2099 1046 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 474 523 IPR017930 -
Mtr6g2099 1046 CDD SANT 532 575 IPR001005 -
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 891 924 - -
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 87 115 - -
Mtr6g2099 1046 Gene3D - 529 581 - -
Mtr6g2099 1046 CDD SANT 583 625 IPR001005 -
Mtr6g2099 1046 Gene3D - 582 628 - -
Mtr6g2099 1046 Gene3D - 480 528 - -
Mtr6g2099 1046 ProSiteProfiles Myb-like domain profile. 576 626 IPR001005 -
Mtr6g2099 1046 Pfam Myb-like DNA-binding domain 429 490 - -
Mtr6g2099 1046 Pfam Myb-like DNA-binding domain 533 592 - -
Mtr6g2099 1046 ProSiteProfiles Myb-like domain profile. 474 525 IPR001005 -
Mtr6g2099 1046 SUPERFAMILY Homeodomain-like 403 456 IPR009057 -
Mtr6g2099 1046 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2099 Mtr-Chr6 37597158 37604860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2099 201 666 MYB-Related Transcription Factor Family AT3G18100 52.941 6.94e-173 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr6g2099 Myb_DNA-bind_6 4.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2099 K09422 - gmx:778073 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g2099 6 37597158 37604860 Mtr6g2099 6 37597158 37604860 ECH