Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2059 ATGTCACACCGGGTCAACTGCAATACCATTTGTAAAAGTTTCTTTCTGTTACTGTTTTCATTTATGTTATTGTTTCATTTAACAAAAACCTCATCACTATTCTTCTCAACTCCCATAGCTATGCAATCACCTTCCTCTTATTTCTCTTGTAATTTCACCTATGATGTCTTCCTCAGTTTCACAGGTGCAGATACTCGCTTTGGTTTTACCGGCAATCTCTACAAAGCTCTAACTGACAAGAAAATTCGCACCTTCATTGATGACAAAGAGCTTCAAAGAGGGGACGAAATCACACCCTCACTTGTGAAGGCAATTCAAGAATCTAGGATAGCCATTCCTATTTTCTCTACCAATTATGCTTCTTCTTCGTTTTGCTTAGATGAACTTGTGCATATAGTTGAGTGTGTCAAGAGGAAGGGTCGTCTCGTTTTGCCTATTTTCTATGATGTGGATCCTTCTCATGTGCGACATCAGACTGGGAGTTATGGTAAAGGAATGACTGATCTTGAAGAGAGGTTCAAAAATAACAAAGAGAAGCTCCAAAAATGGAAGATGGCTCTTAATCAAGTTGCTAACTTGGCTGGATATCATTTCAAACTTGGGAATGAATATGAATACGAGTTTATTGTGAAGATAGTCAAAGAAGTTTCCAACAAGACTGAGCGTGTCCCTCTTCATGTTGCGGATTACCCTGTTGGAATCGAATATCGATTGCTAAAAGTAAAGTCGTATCTTTTAGATACAAAATTTGACGATCGAGTCCAGATGGTGGGGATTTATGGAATTGGCGGATTGGGTAAAACAACACTTGCTCGAGCAATTTATAATATGATTGGTGATAAATTTGAATGCTTGTGTTTTCTTCATGACTTGAGAGAAAGTTCAGCTAAACATGGCTTAGAACATCTCCAACAGAAGCTTCTTTCCAAAACAGTTGAATTGGACACTAAGCTAGGAGATGTTAACGAAGGAATTCCAATAATAAAGCAAAGGCTAGGACGAAAGAAAGTACTTTTGATTCTTGACGACGTTGACAACATGAGGCAATTGCAAGTTATGGCGGGAGGACTTGATTGGTTTGGTCCTGGCAGCATAGTGATCATTACCACTCGAGACCAACATTTGCTAACAAGTCATGGGATTCATAGAAAATATCAAGTAGATGCGCTAAATAGGATAGAATCCCTTGAATTATTTAGGTGGAAAGCTTTTAAAGATAGTATAGGTGATTCAAGATATGATGACATTTTAGACCGTGCAATAGCTTATGCTTCTGGCCTTCCGTTGGTTTTAGAATTAGTAGGTCCCGCGTTGTTTGGAAAGAATATAGAAGAATGGAAATCTATATTAGATAGATATGAAAGGATTCCTAATAAAGAGATCCAAAATATACTTAAAATAAGTTTTGATGCTTTGGAGGAAGATGAACAAGGTGTTTTTCTCGACATTGCTTGTTGCTTCAAAGGGTATGATTTGGGAGAGGTCAAAGATATTCTTTGTGCTCATCATGGTCAAAGCATAGAATATCATATTGGAGTGTTGGTCGAAAAAACTCTCATACAGATTATTCATTTGGGTACGGATGCTGTTGTGACATTACATGACTTGATAGAAGACATGGGTAAAGAAATTGTACGACAAGAATCACCGAAAGAGCCTGGAAAGCGTAGTAGGTTGTGGTTCTATGAAGATATAGTTCAAGTCTTAGAAGAAAATTCGGGAACAAGTCAAATTGAAATTATATATTTGAAATTCCCATTATTTGAGGAGGAAGAGGAGATGGAGGAAGAGGTAGAATGGAAAGGAGATGAATTGAAGAAGATGAAAAACCTCAAAACACTTATTATAGAAAATGGTCGCTTTTCTAGAGCTCCTGAACAACTTCCAAACAGTTTAAGAGTCTTGGAATGGCCTGGATATCCTTCACAGTATTTGCCACATGATTTTTGTCCAAAGAAACTTTCTATATGCAAGCTACCTGGAAATGGCTTTACATCATTTGAGTTGTCTAGCTCATTAAAAAAGAGGTTTGTACATTTGAAAAAGTTAAATTTAGACAACTCTGAATGTCTAACACAGATATTGGACGTATCTGGTCTCAAAAATTTAGTGGAATTTTCATTTCGAAAATGTGAGAATTTAGTCACAATTCATGATTCTATTGGATTCCTTAATAAGCTGAAAATATTGGATGCTTATGGTTGCAGCAATCTAAAGAGTTTTCCACCCTTAAAGTTGACATCTCTAGAAGCATTGGGGCTTTCATATTGTAATAGTCTTGAGAGATTTCCAGAAATATTAGGAAAGATGGAGAATATAACTGACATGTTTTGTGTGGGAACTTCCATAAAAGAATTGCCATTTTCATTTCAAAATCTCACTCGGCTTGAAAAGTTACGACTATGGGGAGATGGAAAGCAAATTCTACAAAGTAGCATTCTCACGATGCCAAAATTATTGACTGATGCTTCAGGTTGTCTATTTCCAAAACAAAATGCTGAACTGAGCTCCATAGTGCCTTCAGATGTACGAATACTTGGACTCCCAAAATGTAACCCGTCAGATGATTTTCTTCCAATAATTCTAACATGGTTTGCTAATGTGGAACATTTAGATCTGTCATGGAACAATTTCACAGTTCTTCCGAAATGTCTTGAACAATGTTGTCTTTTAAGTTTGCTTAATGTCAACAGTTGCAAGTATCTTCGAGAAATTCAAGGGGTTCCTCCAAAATTAAAACGTTTGTCCGCATTGCACTGCAAATCTTTGACATCCATGTCTAGACGCATGCTACTGAATCAGGAACTACATGAGTATGGAGGTGCTGAGTTTATTTTTACAAGAAGTACAAGGTTTCCAGAGTGGTTTGAGCACCAAAATAGGGGGCCATCAATATCTTTTTGGTTTCGTAACAAGCTCCCCACCATAACCCTCTTCGTTGTTTGTAAATCAATGTGGGGTAACGACGCAGACTCAACACATAACCAAGGCCACTATAATGAACTCATTCCATTGAATGTCCAACTGTTCATCAATGGCTATGAATACGGATTTTGCAATCTCGAGGTAAAGCAGTACCATAGGCATGTGTTTGATTTGCAACTGCATGACAAGAGTCTCAAATCTATACTGGACAAAGATGGAAATGTTTTAAAAAATGAATGGCTCCATGCAGAGGTTAGGTATGCAGGTTCAAAGATGAAATCAATTCGTATAAAAAGCGGAATCAATGTACTCAATCACAAAAGTAGCTTGGAGGATATTCAATTCACTGATCCTTCCTTGTAA 3288 0.3723 MSHRVNCNTICKSFFLLLFSFMLLFHLTKTSSLFFSTPIAMQSPSSYFSCNFTYDVFLSFTGADTRFGFTGNLYKALTDKKIRTFIDDKELQRGDEITPSLVKAIQESRIAIPIFSTNYASSSFCLDELVHIVECVKRKGRLVLPIFYDVDPSHVRHQTGSYGKGMTDLEERFKNNKEKLQKWKMALNQVANLAGYHFKLGNEYEYEFIVKIVKEVSNKTERVPLHVADYPVGIEYRLLKVKSYLLDTKFDDRVQMVGIYGIGGLGKTTLARAIYNMIGDKFECLCFLHDLRESSAKHGLEHLQQKLLSKTVELDTKLGDVNEGIPIIKQRLGRKKVLLILDDVDNMRQLQVMAGGLDWFGPGSIVIITTRDQHLLTSHGIHRKYQVDALNRIESLELFRWKAFKDSIGDSRYDDILDRAIAYASGLPLVLELVGPALFGKNIEEWKSILDRYERIPNKEIQNILKISFDALEEDEQGVFLDIACCFKGYDLGEVKDILCAHHGQSIEYHIGVLVEKTLIQIIHLGTDAVVTLHDLIEDMGKEIVRQESPKEPGKRSRLWFYEDIVQVLEENSGTSQIEIIYLKFPLFEEEEEMEEEVEWKGDELKKMKNLKTLIIENGRFSRAPEQLPNSLRVLEWPGYPSQYLPHDFCPKKLSICKLPGNGFTSFELSSSLKKRFVHLKKLNLDNSECLTQILDVSGLKNLVEFSFRKCENLVTIHDSIGFLNKLKILDAYGCSNLKSFPPLKLTSLEALGLSYCNSLERFPEILGKMENITDMFCVGTSIKELPFSFQNLTRLEKLRLWGDGKQILQSSILTMPKLLTDASGCLFPKQNAELSSIVPSDVRILGLPKCNPSDDFLPIILTWFANVEHLDLSWNNFTVLPKCLEQCCLLSLLNVNSCKYLREIQGVPPKLKRLSALHCKSLTSMSRRMLLNQELHEYGGAEFIFTRSTRFPEWFEHQNRGPSISFWFRNKLPTITLFVVCKSMWGNDADSTHNQGHYNELIPLNVQLFINGYEYGFCNLEVKQYHRHVFDLQLHDKSLKSILDKDGNVLKNEWLHAEVRYAGSKMKSIRIKSGINVLNHKSSLEDIQFTDPSL* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2059 1095 Gene3D Ribonuclease Inhibitor 596 770 IPR032675 -
Mtr6g2059 1095 Gene3D - 220 386 IPR027417 -
Mtr6g2059 1095 Coils Coil 166 186 - -
Mtr6g2059 1095 SMART till_3 53 193 IPR000157 GO:0007165
Mtr6g2059 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 63 1062 IPR044974 GO:0006952
Mtr6g2059 1095 PRINTS Disease resistance protein signature 256 271 - -
Mtr6g2059 1095 PRINTS Disease resistance protein signature 331 345 - -
Mtr6g2059 1095 PRINTS Disease resistance protein signature 424 438 - -
Mtr6g2059 1095 PRINTS Disease resistance protein signature 744 760 - -
Mtr6g2059 1095 Pfam NB-ARC domain 239 464 IPR002182 GO:0043531
Mtr6g2059 1095 PANTHER ARCHAEAL ATPASE 63 1062 - -
Mtr6g2059 1095 Gene3D - 51 219 IPR035897 -
Mtr6g2059 1095 ProSiteProfiles TIR domain profile. 52 220 IPR000157 GO:0007165
Mtr6g2059 1095 CDD AAA 259 372 - -
Mtr6g2059 1095 Gene3D Ribonuclease Inhibitor 771 937 IPR032675 -
Mtr6g2059 1095 Gene3D - 389 473 IPR042197 -
Mtr6g2059 1095 SMART AAA_5 253 390 IPR003593 -
Mtr6g2059 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 483 IPR027417 -
Mtr6g2059 1095 Pfam TIR domain 54 222 IPR000157 GO:0007165
Mtr6g2059 1095 SUPERFAMILY L domain-like 533 924 - -
Mtr6g2059 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 43 196 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2059 Mtr-Chr6 37163592 37167660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2059 35 871 WRKY Transcription Factor Family AT4G12020 29.066 1.71e-76 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2059 - - gmx:100814962 1132.86