Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2057 ATGGCTTCTGTCCCCAAAGCATTCACCTATGATGTGTTCCTTAGCTTTCGAGGTGAGGATACTCGCTACGGTTTCACTGGAAATCTATGGAAAGCTCTCCATGACAAAGGAGTCCGTACTTTCATGGACGACGAGGAGCTTCAAAAAGGTGAAGAAATCACACCATCACTCATCAAAGCCATTGAAAATTCCAACATGGCCATCGTTGTTCTTTCCAAGAATTATGCTTCTTCTTCCTTTTGCTTAAAAGAACTTTCTAAGATCCTTGAGGTGGGTCTTTTTGTTTTGCCAGTTTTCTACAAGGTGGATCCTTCCGATGTACGAAAGTTAGAAAAGAGTTATGGAGAAGCCATGGATAAACATAAGGCCAGCTCTAATCTGGATAAATGGAAGATGTCTCTTCACCAAGTTGCCAATTTGTCAGGTTTTCATTACAAGAAAAGGGATGGGTATGAGCACGAGTTTATTGGGAAGATTGTTGAACAAGTCTTAAGAAATATAAAACCCGTTGCCTTACCTATTGGTGACTACCTAGTTGGACTGGAGCACCAAAAGCAACACGTGACTTCACTTTTGAATGTTGGATCTGATGATGCAATCCATATGGTAGGGATCCATGGGATTGGTGGAATAGGGAAAACTACTCTTGCTCTAGAAGTTTATAACTCTATTGTCTGTCAATTTCAAGGTTCCTGTTTTCTTGAAAAAGTAAGAGAAAATTCAGACAAAAATGGGTTGATATATCTCCAAAAGATCCTTTTGTCTCAAATTTTTGGAGAGAAGAACATTGAGTTAACAAGTGTTGGACAAGGAATTTCCATGTTACGACAAAGGCTCCACCAAAAGAAGATTCTTTTGCTTCTAGATGATGTTGACAATTTGGAGCAATTAGAGGCCATTGCTGGAAGATCCGTTTGGTTTGGTCCAGGAAGTAGAGTCATCATTACGACTCGGGACAAAAGGTTGCTAACAAGGCATGAGATTGAAATAACATATGAGGTGAATGGATTGAATGATGAAGATGCTTTTGACTTGATACGGTGGAAAGCTTTAAAAAACAAATATAGTCCAAGCTATAAAGATATATTATTTGTTACAAAGTATGGAAGAGAATTAATGGATATGAACGACAAGGTTTTTTCAGGTTATGTGCATGTTTTAAAACGTGCGGTAGCATATGCTTCTGGCCTTCCACTCGCTTTGGAAGTCATAGGTTCTCACTTTTTTAATAAGACAATAGAGGAATGTAAATGTGCACTAGATCGTTATGAAAGGGTTCCTGATAAAAAGATCCAAACGACACTGCAACTGAGCTTTAATGCTTTGCAAGAAGAAGAAAAGTCTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATGGAAATTGAAAAGAGTCGAAGAAATACTTCATGCCCATCATGGTGATATCATGAAAGATCACATTAATGCATTAGTGGAAAAATCTCTCATAAAAGTAAGCGAGTCTGGTAATCTGACATTACACGATTTGGTAGAGGATATGGGGAAAGAAATTGTTAGACAAGAGTCACCAGAAAATCCTGGAAAACGCAGTAGGCTATGGTCCTCTAAAGATATCATTCGAGTCTTGGAAGAAAATACAGGAACAAGTAAAATTGAAATCATATATTTCGACCGTTGGATTAGAGTAGAATGGGATGGAGAAGCTTTCAAGAAGATGGAAAATCTCAAAACACTCATTTTTAGTAATGATGTTTTCTTTTCTAAAAATCCCAAACATCTTCCAAATAGTCTAAGAGTGTTGGAATGTCGATATCACAAGTATCATTCATCAGATTTCCATGTGCATGATGATAGATGCCATTTTTTCATTCACCCTCCATCAAATCCATTTGAGTGGAAGGGCTTTTTCACAAAGAAGTTCGAGAATATGAGAGTTTTAAATCTTGATCATAGTGAAGGTTTAGCAGAAATACCTAATATATCTGGTCTCCCAAATTTAGAAGAATTTTCAATTCAAAATGGTGAGAAAGTAATTGCAATTGATAAATCGATTGGTTTTTTGGGTAAACTTAAAATCTTTAGAATTATAAGTTGTGCCGAAATCCGGAGTGTTCCACCTCTCAGTTTGGCTTCACTGGAAGAAATAGAATTTTCACATTGTTATAGCCTAGAAAGCTTTCCTCTCATGGTGAATAGATTTCTTGGTAAACTTAAAATCTTAAGGGTTATAAATTGTACCAAAATCAAAATTATTCCATCACTCATTTTACCTTCTCTAGAAGAACTTGATCTTTCAGATTGTACTGGTCTTGAGAGTTTTCCACCTTTGGTAGATGGGTTTGGTGATAAGCTTAAAACCATGAGTGTTAGAGGTTGCATCAATATAAGGAGTATTCCAACTCTCATGTTAGCTTCTCTAGAAGAACTTGATCTTTCAGATTGTATTAGTCTTGAGAGTTTTCCAATAGTGGAGGATGGGTTTCTCGGAAAACTAAAAACCTTGCTTCTTAAAAATTGTCATAATCTCAAGAGTATTCCACCTCTCATGTTGGATTCACTAGAAACACTTGACCTTTCAAATTGTTATAATCTCGAGAGTTTTCCACTTGTGGTAGACGGGTTTCTTGGAAAACTTAAAACCCTTCTTGTTGGAAGTTGTCACAAACTCAGGAGTATTCCACCTCTCAAGTTGGATTCACTAGAAAAACTTGACCTTTCATATTGTTGTAGTCTCGAGAGTTTTCTATCTGTGGAGGATGGGTTGCTGGATAAACTGAAATTCTTGAATATTGAATGTTGTGTCATGCTTAGGAATATCCCATGGCTCAAGTTGACTTCTTTGGAACATTTCAATCTTTCATGTTGTTATAGTCTTGATCTTGAGAGTTTTCCAGATATATTGGGAGAGATGAGAAATATACCAGGACTCCTATTGGATGAAACTACCATAGAAGAGTTGCCATTTCCATTTCAAAATCTTACCCAGCTTCAAACATTTCATCCATGTAACTGTGAATATGTTTACGTACCAAGTAGCATGTCAAAACTGGCTGAATTTACCATCATGAATGAAAGGATGTCAAAAGTGGCTGAATTTACCATCCAGAATGAAGAAAAAGTGTACGCAATCCAATCTGCACATGTAAAGTATATTTGCATCAGGGACTGCAAACTTTCAGATGAATATCTGTCACTAAATCTCATGTTGTTTGCTAATGTGAAAGAATTACACCTAACTAACATTCAATTCACAGTTCTTCCTAAATCTATTGAAAAATGTCATTTTTTGTGGAAACTCGTTTTGGATGATTGCAAGGATCTTCAGGAAATTAAAGGGAATCCTCCAAGCTTAAAAATGTTATCTGCACTAAATTGCATATCGTTGACTTCTTCATGCAAAAGCATATTAGTAAAGCAGGAATTACATGAGGATGGAAACACTTGGTTCCGTTTGCCACAGACAAAGATTCCAGAGTGGTTCGACCACCAAAGCGAGGCAGGATTGTCAATTTCTTTCTGGTTTCTTAACAAGTTTCCTGCCATAGCTCTCTGTGTAGTTTCTCCATTGACATGGTATCGTTCTCAACATTGTGTTAGAGTGGTCATCAACGGAGATACATTTTTCTATACACATGGTTCGAAGATTGGTGCAAAATCACAGGCGGATACGTATCATTTGCATCTTTTCCATATGCAAACGGAAAACTTCAATGATAATATGGATAAATCACTTTTAGAAAATAAGTGGAACCATGCAAAGGTTTACTTTGGATTCAAATTCCATAAAAGTGGAATCCATGTATTGAAAGCTAAAAGTAACATGAAGGATATTCGATTCAGCGACCCAGGGAGTTGA 3837 0.3677 MASVPKAFTYDVFLSFRGEDTRYGFTGNLWKALHDKGVRTFMDDEELQKGEEITPSLIKAIENSNMAIVVLSKNYASSSFCLKELSKILEVGLFVLPVFYKVDPSDVRKLEKSYGEAMDKHKASSNLDKWKMSLHQVANLSGFHYKKRDGYEHEFIGKIVEQVLRNIKPVALPIGDYLVGLEHQKQHVTSLLNVGSDDAIHMVGIHGIGGIGKTTLALEVYNSIVCQFQGSCFLEKVRENSDKNGLIYLQKILLSQIFGEKNIELTSVGQGISMLRQRLHQKKILLLLDDVDNLEQLEAIAGRSVWFGPGSRVIITTRDKRLLTRHEIEITYEVNGLNDEDAFDLIRWKALKNKYSPSYKDILFVTKYGRELMDMNDKVFSGYVHVLKRAVAYASGLPLALEVIGSHFFNKTIEECKCALDRYERVPDKKIQTTLQLSFNALQEEEKSVFLDIACCFKGWKLKRVEEILHAHHGDIMKDHINALVEKSLIKVSESGNLTLHDLVEDMGKEIVRQESPENPGKRSRLWSSKDIIRVLEENTGTSKIEIIYFDRWIRVEWDGEAFKKMENLKTLIFSNDVFFSKNPKHLPNSLRVLECRYHKYHSSDFHVHDDRCHFFIHPPSNPFEWKGFFTKKFENMRVLNLDHSEGLAEIPNISGLPNLEEFSIQNGEKVIAIDKSIGFLGKLKIFRIISCAEIRSVPPLSLASLEEIEFSHCYSLESFPLMVNRFLGKLKILRVINCTKIKIIPSLILPSLEELDLSDCTGLESFPPLVDGFGDKLKTMSVRGCINIRSIPTLMLASLEELDLSDCISLESFPIVEDGFLGKLKTLLLKNCHNLKSIPPLMLDSLETLDLSNCYNLESFPLVVDGFLGKLKTLLVGSCHKLRSIPPLKLDSLEKLDLSYCCSLESFLSVEDGLLDKLKFLNIECCVMLRNIPWLKLTSLEHFNLSCCYSLDLESFPDILGEMRNIPGLLLDETTIEELPFPFQNLTQLQTFHPCNCEYVYVPSSMSKLAEFTIMNERMSKVAEFTIQNEEKVYAIQSAHVKYICIRDCKLSDEYLSLNLMLFANVKELHLTNIQFTVLPKSIEKCHFLWKLVLDDCKDLQEIKGNPPSLKMLSALNCISLTSSCKSILVKQELHEDGNTWFRLPQTKIPEWFDHQSEAGLSISFWFLNKFPAIALCVVSPLTWYRSQHCVRVVINGDTFFYTHGSKIGAKSQADTYHLHLFHMQTENFNDNMDKSLLENKWNHAKVYFGFKFHKSGIHVLKAKSNMKDIRFSDPGS* 1279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2057 1278 Gene3D Ribonuclease Inhibitor 556 749 IPR032675 -
Mtr6g2057 1278 Gene3D Ribonuclease Inhibitor 750 819 IPR032675 -
Mtr6g2057 1278 Gene3D Ribonuclease Inhibitor 820 951 IPR032675 -
Mtr6g2057 1278 Gene3D Ribonuclease Inhibitor 952 1138 IPR032675 -
Mtr6g2057 1278 Pfam NB-ARC domain 186 429 IPR002182 GO:0043531
Mtr6g2057 1278 SMART till_3 9 140 IPR000157 GO:0007165
Mtr6g2057 1278 SUPERFAMILY L domain-like 548 908 - -
Mtr6g2057 1278 Pfam C-JID domain 1145 1262 IPR045344 -
Mtr6g2057 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 453 IPR027417 -
Mtr6g2057 1278 Gene3D - 371 443 IPR042197 -
Mtr6g2057 1278 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 852 IPR044974 GO:0006952
Mtr6g2057 1278 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 824 1251 IPR044974 GO:0006952
Mtr6g2057 1278 PRINTS Disease resistance protein signature 202 217 - -
Mtr6g2057 1278 PRINTS Disease resistance protein signature 278 292 - -
Mtr6g2057 1278 PRINTS Disease resistance protein signature 394 408 - -
Mtr6g2057 1278 PRINTS Disease resistance protein signature 842 858 - -
Mtr6g2057 1278 SUPERFAMILY L domain-like 821 1143 - -
Mtr6g2057 1278 SMART AAA_5 199 334 IPR003593 -
Mtr6g2057 1278 Gene3D - 173 332 IPR027417 -
Mtr6g2057 1278 ProSiteProfiles TIR domain profile. 8 167 IPR000157 GO:0007165
Mtr6g2057 1278 Gene3D - 5 172 IPR035897 -
Mtr6g2057 1278 Pfam TIR domain 10 166 IPR000157 GO:0007165
Mtr6g2057 1278 PANTHER ARCHAEAL ATPASE 824 1251 - -
Mtr6g2057 1278 PANTHER ARCHAEAL ATPASE 20 852 - -
Mtr6g2057 1278 SUPERFAMILY "Winged helix" DNA-binding domain 429 537 IPR036390 -
Mtr6g2057 1278 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 143 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr6g2057 Mtr-Chr6 37134578 37142131 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2057 776 990 WRKY Transcription Factor Family AT4G12020 33.333 6.13e-10 62.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2057 - - mtr:MTR_6g079140 2535.37