Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2055 ATGAAAGATCACATTGATGTGTTAGTGGAAAAATCTCTCATAAAAATAAGCGTTTCTGGTAATGTAACATTACATGATTTGATAGAGGATATGGGGAAAGAAATTGTTAGACGAGAATCACCTGAAGATCCTGGAAAACGCACTAGGTTATGGGCCTATGAAGATATAAAGAAAGTTTTTAAAGAAAATACGGGAACAAGTACCATTAAAATCATACATTTCCAATTTGACCCATGGATTGAAAAAAAGAAGGATGCCTCAGATGGAAAAGCTTTCAAGAAGATGAAAAATCTCAGAACACTAATTTTTAGTACTCCTGTTTGTTTTTCTGAAACTTCTGAACATATTCCAAATAGTCTACGAGTGCTAGAATATTCCAATCGCAATCGCAATTATTACCATAGCCGTGGATCAAATCTATTTGAGTGGGACGGCTTTCTCAAAAAGGCAAGTGATTCATATCTCTTTTTCTATATTAATATGATTTTGATTCCAATATAA 501 0.3313 MKDHIDVLVEKSLIKISVSGNVTLHDLIEDMGKEIVRRESPEDPGKRTRLWAYEDIKKVFKENTGTSTIKIIHFQFDPWIEKKKDASDGKAFKKMKNLRTLIFSTPVCFSETSEHIPNSLRVLEYSNRNRNYYHSRGSNLFEWDGFLKKASDSYLFFYINMILIPI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2055 166 SUPERFAMILY "Winged helix" DNA-binding domain 1 60 IPR036390 -
Mtr6g2055 166 PANTHER ARCHAEAL ATPASE 1 136 - -
Mtr6g2055 166 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 136 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2055 Mtr-Chr6 37123689 37126441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2055 8 125 WRKY Transcription Factor Family AT4G12020 39.200 2.26e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2055 - - mtr:MTR_6g079120 285.804