Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2052 ATGAGAGTTTTGAATCTCGAAGGTGGCAGTGGTTTAGTACAAATACCTAATATATCTGGTCTCTCAAATTTAGAAAAACTTTCAATTAAAAATTGTTGGAAACTAATTGCAATTGATAAATCGGTTGGTTTTCTAGGTAAACTTAAAATCTTGAGACTTATAAATTGCATTGAAATCCAGAGTATTCCACCTCTCATGTTAGCTTCTCTAGTAGAACTCCATCTTTCAGGATGCAATAGCCTTGAGAGTTTTCCACCTGTGTTAGATGGATTTGGTGATAAGCTAAAAACCATGAATGTTATATATTGCAAAATGCTAAGGAGTATTCCACCTCTCAAGTTGAATTCTCTAGAAACACTTGACCTTTCGCAGTGTTATAGTCTTGAGAATTTTCCACTTGTGGTAGATGCGTTTCTTGGAAAACTTAAAACCTTGAATGTTAAAGGTTGCTGCAAACTAACGAGTATTCCACCTCTCAAGTTGAATTCTCTAGAAACACTTGACCTTTCGCAATGTTATAGTCTTGAGAATTTCCCACTTGTGGTGGATGCGTTTCTTGGAAAACTTAAAACCCTGAATGTTGAAAGTTGTCACAATCTCAAGAGTATTCAACCTCTCAAGTTGGATTCGCTAATATATCTTAACCTTTCACATTGTTATAATCTTGAGAATTTTCCATCTGTGGTGGACGAGTTTCTTGGAAAACTTAAGACCTTGTGTTTTGCAAAGTGTCACAATCTCAAGAGTATTCCACCTCTCAAGTTGAATTCACTGGAAACCCTTGACTTTTCATCATGTCATAGGCTCGAGAGCTTTCCACCTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCCTGCTTGTTAGAAAGTGTTACAATCTCAAGAGTATCCCACCTCTCAAGCTGGATTCTTTAGAGAAACTTGACCTTTCATGTTGCTGTAGTCTTGAGAGTTTTCCATGTGTGGTGGATGGGTTGTTGGATAAACTTAAATTTTTGAATATTGAATGTTGCATCATGCTTAGGAATATCCCACGGCTCAGGTTGACTTCATTGGAATATTTCAATCTTTCATGTTGTTATAGTCTCGAGAGTTTTCCAGAAATATTGGGGGAAATGAGAAATATACCAGGACTCCTTAAGGATGATACTCCCATAAAAGAAATTCCATTTCCCTTTAAAACTCTTACTCAGCCTCAGACATTATGTGACTGTGGATATGTTTACTTACCAAATAGGATGTCAACATTGGCTAAATTTACCATTAGGAATGAAGAAAAAGTGAATGCAATTCAATCTTCACATGTAAAGTATATTTGTGTCAGGCACGTCGGCTATCGTTCAGAGGAATATCTGTCAAAAAGTCTTATGTTGTTTGCTAATGTGAAAGAATTACACTTAACTAGTAATCATTTCACAGTTATTCCTAAATCTATTGAAAATTGTCAATTTTTGTGGAAACTCATCTTGGATGATTGTACGGCACTTAAAGAAATTAAAGGGATTCCTCCATGCTTAAGAATGTTATCTGCACTAAACTGCAAGTCGTTGACTTCGTCGTGCAAGAGCAAATTGCTAAATCAGGAATTACATGAGGCTGGAAAAACATGGTTTCGTTTGCCACAAGCAACATTTCCAGAGTGGTTTGATCACCATTGTATGGCAGGAACATATATTTCTTTTTGGTTTCGTAACAAGTTTCCTGTCATAGCTCTCTATGTTCTTTCTCCATTTACATGGGATGGTTCTCCATTAAGAGTGATCATCAACGGAGATACATTTTTTTATACACATGGTTCGAAGATTGGTGCCAAATCACATGCAGATACATATCATTTGCATCTTTTTCATATGCAAATGGAAAACTTCAATGATAATATGGACAAAGCACTTTCAGAAAATAAGTGGAACCATGCGGAGGTTCTCTTTGGATTCAAATTCCTTAAAAGTGGAATCCATGTATTGAAAGAGAAAATTAACTTGAAGGATATTCGATTCACCAATCCAGAGAATGATGCTAACATTGTAATCACTCGGGGTGAAGTTACTGATCTTCCACATGCCATGCTACCACCAGAGCCCATTAACTTGTCAACAGAACTTTCATCAACTTCCGATGAAACTGAACCGTTGATGAACAACTTGCATTTGAGTCCATCTTTTAGAAGACACTTTTCTCAGAACAATGCGGCTAACGAGACTGAGCAAATTCAGTGCTTTTCATCATTTAAGTCCATCTTCCTAGACAACCAAGAAAGTGAAGCACAAGGCAGAGAGAGTTCACACCATTGTTTAATTATGTGA 2304 0.3676 MRVLNLEGGSGLVQIPNISGLSNLEKLSIKNCWKLIAIDKSVGFLGKLKILRLINCIEIQSIPPLMLASLVELHLSGCNSLESFPPVLDGFGDKLKTMNVIYCKMLRSIPPLKLNSLETLDLSQCYSLENFPLVVDAFLGKLKTLNVKGCCKLTSIPPLKLNSLETLDLSQCYSLENFPLVVDAFLGKLKTLNVESCHNLKSIQPLKLDSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKCHNLKSIPPLKLNSLETLDFSSCHRLESFPPVVDGFLGKLKTLLVRKCYNLKSIPPLKLDSLEKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCIMLRNIPRLRLTSLEYFNLSCCYSLESFPEILGEMRNIPGLLKDDTPIKEIPFPFKTLTQPQTLCDCGYVYLPNRMSTLAKFTIRNEEKVNAIQSSHVKYICVRHVGYRSEEYLSKSLMLFANVKELHLTSNHFTVIPKSIENCQFLWKLILDDCTALKEIKGIPPCLRMLSALNCKSLTSSCKSKLLNQELHEAGKTWFRLPQATFPEWFDHHCMAGTYISFWFRNKFPVIALYVLSPFTWDGSPLRVIINGDTFFYTHGSKIGAKSHADTYHLHLFHMQMENFNDNMDKALSENKWNHAEVLFGFKFLKSGIHVLKEKINLKDIRFTNPENDANIVITRGEVTDLPHAMLPPEPINLSTELSSTSDETEPLMNNLHLSPSFRRHFSQNNAANETEQIQCFSSFKSIFLDNQESEAQGRESSHHCLIM* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2052 767 SUPERFAMILY L domain-like 2 287 - -
Mtr6g2052 767 PANTHER ARCHAEAL ATPASE 11 88 - -
Mtr6g2052 767 PANTHER ARCHAEAL ATPASE 236 644 - -
Mtr6g2052 767 Gene3D - 144 189 - -
Mtr6g2052 767 Gene3D Ribonuclease Inhibitor 190 327 IPR032675 -
Mtr6g2052 767 Gene3D Ribonuclease Inhibitor 1 113 IPR032675 -
Mtr6g2052 767 SUPERFAMILY L domain-like 246 520 - -
Mtr6g2052 767 Gene3D Ribonuclease Inhibitor 328 537 IPR032675 -
Mtr6g2052 767 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 88 IPR044974 GO:0006952
Mtr6g2052 767 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 236 644 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2052 Mtr-Chr6 37105173 37110778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2052 233 397 WRKY Transcription Factor Family AT4G12020 32.447 1.49e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2052 - - mtr:MTR_3g006280 955.281