Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2049 ATGGATGACGAGAATCTTCAGAAAGGGGATGAAATCACACCGTCACTTATTAAGGCAATTGAAGACTCACAAATCGCCATAGTTGTCCTCTCTAAGAATTATGCTTCATCATCCTTTTGCTTACAAGAACTTTCAAAGATCCTTGATACCATGAAAGATAAGGTGGGTCGTTTTGTTATGCCAGTATTTTATAAGGTGGATCCTTCTGATGTACGAAAGTTGAAAGGGACATATGGAGATGCGATGGATAAACTTGGCGAGGCCAGCTCCTCCAGTCATAATAAATGGAAGGACTCTCTTCATCAAGTTGCTAATTTGTCTGGATTTCCTTACGAGAAAAGGGATGGGTATGTGCATGAGTTTATTGAGAAGATTGTTGAAGAAGTCTTAAGAAATATAAAACCTGTTGCCTTACCTGCTGGTGACTTCCTTGTTGGAGTGGAGCACCAAAAGCAACACGTGACTTTGCTTTTGAATGTTGGGTCTGACGATTCAATCCACAAGGTAGGGATTCTTGGGATTGGTGGAATAGGGAAAACCACTCTTGCTCTAGAAGTTTATAATTCAATTGTCAGTCAATTTGAATGTTCCTGTTTTCTTGAAAAAGTTAGAGAAAATTCTGACAAAAATGGGTTGATATATCTCCAAAAGATCCTTCTATCTCATATTTTTGGAGAGAAGAACACAGAGATAACAAGTGTTGGAGAAGGAATTTCAATACTAAAAAAAAGGCTTCCAGAAAAGAAGGTTCTTTTGCTTTTAGACGATGTTGACAAGAAGGAGCAATTAAAGGCTATTGCAGGAAGTTCCAATTGGTTTCGTAAAGGCAGTAGAGTAATAATCACAACTCGGTACAAAAATTTGCTAATTAGCAGTGGAGTTGAAAGAATATATGAGGTGAAGGGATTGAATGATGAAGATGCTTTTGACTTGGTAGGATGGAAAACTTTAAAAAACGATTGTAGTCCACGCTATAAAGATGTTTTATTAGAACAAAAGTATGGAAGAGAATCTGATGCAAACAAATTGCGTAGACTGAAAGATTTGAAGAACGACGAAGGCTACGCAAATGTATTAAAACGTGTCGTAGCATATGCTTCTGGTCATCCACTTGCTTTGGAAGTCATCGGTTCTCACTTTTCTAATAAGACAATAGAACAGTGTAATGATGCACTAGATCGTTACAAAAGAGTTCCTCATAACATGATCCAAACGACACTACAACTGAGTTATGATTCTTTGCAGGAAGAAGAGAAGATTGTGTTTCTTGACATTGCATGTTGCTTCAAAGGATGGAAATTGACAATGGTTGAAGGAATACTTCATGCTCATCATGGTCATACCATGAAAGACCAAATTAATGTGTTAGTGGAAAAGTATCTCATAAAAATAAATGAGTCTGGTAATGTGACATTACATGATTTGGTAGAGGATATGGGAAAAGAAATTGTTAGACAAGAAGCACCTGAAGATCCTGGAAAACGTAGTAGGTTATGGTTTTCCGAAGATATAATTCAAGTTTTAGAAGAAAATACAGGAACAAGTAAAATTGAAATGATACATTTCGACGGTGTGATTGAAGTACAATGGGATGGAGAAGCTTTCAAGAAGATGGAAAATCTCAAAACACTCATTTTTAGTAATGATGTTTTTTTTTCTGAAAATCCCAAACATCTTCCAAATAGTCTAAGAGTGTTGGAATGCCGCAATCACATGTGTCCATTTAAATGGGAGGGCTTTCTCACAATGAAGTTCCAGAATATGAGAGTTCTAAAACTTTATTATAGTGACGGTTTAACACAGATACCTGATATATCTGGTCTCCCAAATTTAGAAGAATTTTCAATTCAAAATTATGGGAAATTATTCACAATTGATGAATCGGTTGGATCTTTGCGTAAGCTTAAAATCCTGAGGGTTATAAGTTGCACCGAAATCCACAGTCTTCCATCTCTCATGTTACCCTCTCTAGAAGAACTTGATCTTTCATATTGTATTAATCTTGAGAGTTTTTCGCATGTGGTAGATGGGTTTGGTGATAAGCTTAGAACCATGAGTGTTAGAGGATGCTTCAAGCTAAAGAGTATTCCACCTCTTAAGTTGGATTCACTAGAAACAATGGACCTTTCATGTTGTTTTCGTCTCGAGAGTTTTCCACTTGTGGTGGATGGGATTCTTGGAAAAATTAAAACTCTGAATGTTGAAAGTTGTCACAATCTCAGGAGTATTCCACCACTCAAGTTGGATTCGTTAGAAAAACTTGACATTTCATATTGTGGTAGTCTTGAGAGTTTTCCACAAGTGGAGGGAAGGTTTCTTGGAAAACTTAAAACCTTGAATGTTAAAAGTTGTCGGATTATGATAAGTATTCCAACTCTCATGTTAAGTTTGCTAGAAGAGCTAGATCTTTCGTATTGTCTTAATCTCGAGAATTTTCCACTTGTAGTGGATGGGTTTCTTGGAAAACTTAAAACCCTGAGTGCTAAAAGTTGTCGCAATTTAAGGAGTATTCCATCTCTCAAGTTGGATTTACTAGAAACACTTGACCTTTCAAATTGTGTTAGTCTTGAGAGTCTTCCACTTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCCTACTTGTTACAAACTGTCACAATCTTAAGAGTATTCCACCTCTGAAGTGTGATGCACTAGAAACACTTGACCTTTCATGTTGTTATAGTCTTCAAAGTTTTTCACTTGTGGCTGACAGATTATGGAAACTCGTGTTGGATGATTGTAAGGAACTTCAGGAAATTAAAGTGATTCCTCCATGCTTAAGAATGTTATCTGCTGTAAACTGCACGTCGTTGACTTCTTCGTGCACAAGCAAATTACTAAATCAGGAATTACATAAGGCTGGAAACACTTGGTTTTGTTTGCCACGGGTGCCAAAAATTCCAGAGTGGTTTGACCACAAATACGAGGCCGGATTGTCAATTTCTTTCTGGTTTCGTAACAAGTTTCCTGCCATAGCTCTCTGTGTTGTTTCTCCATTAACATGGGATGGTTCTCGACGTCATTCTATAAGAGTGATCATCAATGGAAATACATTTATCTACACAGATGGTTTGAAGATGGGTACGAAATCACCGCTGAATATGTATCATTTGCATCTTTTTCATATGAAAATGGAAAACTTTAATGATAATATGGAAAAAGTACTTTTTGAAAATATGTGGAACCATGCAGAGGTTGATTTTGGATTACCATTCCAGAAAAGTGGAATTCATGTATCGAAAGAGAAAAGTAACATGAAGGATATTAGATTCACCAATCCAGAGGTTGATTTTATTTTACTCTAG 3327 0.367 MDDENLQKGDEITPSLIKAIEDSQIAIVVLSKNYASSSFCLQELSKILDTMKDKVGRFVMPVFYKVDPSDVRKLKGTYGDAMDKLGEASSSSHNKWKDSLHQVANLSGFPYEKRDGYVHEFIEKIVEEVLRNIKPVALPAGDFLVGVEHQKQHVTLLLNVGSDDSIHKVGILGIGGIGKTTLALEVYNSIVSQFECSCFLEKVRENSDKNGLIYLQKILLSHIFGEKNTEITSVGEGISILKKRLPEKKVLLLLDDVDKKEQLKAIAGSSNWFRKGSRVIITTRYKNLLISSGVERIYEVKGLNDEDAFDLVGWKTLKNDCSPRYKDVLLEQKYGRESDANKLRRLKDLKNDEGYANVLKRVVAYASGHPLALEVIGSHFSNKTIEQCNDALDRYKRVPHNMIQTTLQLSYDSLQEEEKIVFLDIACCFKGWKLTMVEGILHAHHGHTMKDQINVLVEKYLIKINESGNVTLHDLVEDMGKEIVRQEAPEDPGKRSRLWFSEDIIQVLEENTGTSKIEMIHFDGVIEVQWDGEAFKKMENLKTLIFSNDVFFSENPKHLPNSLRVLECRNHMCPFKWEGFLTMKFQNMRVLKLYYSDGLTQIPDISGLPNLEEFSIQNYGKLFTIDESVGSLRKLKILRVISCTEIHSLPSLMLPSLEELDLSYCINLESFSHVVDGFGDKLRTMSVRGCFKLKSIPPLKLDSLETMDLSCCFRLESFPLVVDGILGKIKTLNVESCHNLRSIPPLKLDSLEKLDISYCGSLESFPQVEGRFLGKLKTLNVKSCRIMISIPTLMLSLLEELDLSYCLNLENFPLVVDGFLGKLKTLSAKSCRNLRSIPSLKLDLLETLDLSNCVSLESLPLVVDGFLGKLKTLLVTNCHNLKSIPPLKCDALETLDLSCCYSLQSFSLVADRLWKLVLDDCKELQEIKVIPPCLRMLSAVNCTSLTSSCTSKLLNQELHKAGNTWFCLPRVPKIPEWFDHKYEAGLSISFWFRNKFPAIALCVVSPLTWDGSRRHSIRVIINGNTFIYTDGLKMGTKSPLNMYHLHLFHMKMENFNDNMEKVLFENMWNHAEVDFGLPFQKSGIHVSKEKSNMKDIRFTNPEVDFILL* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2049 1108 ProSiteProfiles TIR domain profile. 1 133 IPR000157 GO:0007165
Mtr6g2049 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 425 IPR027417 -
Mtr6g2049 1108 Pfam NB-ARC domain 166 413 IPR002182 GO:0043531
Mtr6g2049 1108 Gene3D - 138 296 IPR027417 -
Mtr6g2049 1108 PANTHER ARCHAEAL ATPASE 680 1076 - -
Mtr6g2049 1108 PANTHER ARCHAEAL ATPASE 1 668 - -
Mtr6g2049 1108 SMART till_3 1 106 IPR000157 GO:0007165
Mtr6g2049 1108 Gene3D - 337 415 IPR042197 -
Mtr6g2049 1108 SUPERFAMILY "Winged helix" DNA-binding domain 403 509 IPR036390 -
Mtr6g2049 1108 Pfam TIR domain 2 132 IPR000157 GO:0007165
Mtr6g2049 1108 PRINTS Disease resistance protein signature 168 183 - -
Mtr6g2049 1108 PRINTS Disease resistance protein signature 244 258 - -
Mtr6g2049 1108 PRINTS Disease resistance protein signature 366 380 - -
Mtr6g2049 1108 PRINTS Disease resistance protein signature 840 856 - -
Mtr6g2049 1108 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 109 IPR035897 -
Mtr6g2049 1108 SUPERFAMILY L domain-like 681 980 - -
Mtr6g2049 1108 Gene3D Ribonuclease Inhibitor 527 677 IPR032675 -
Mtr6g2049 1108 Gene3D Ribonuclease Inhibitor 678 770 IPR032675 -
Mtr6g2049 1108 Gene3D Ribonuclease Inhibitor 771 866 IPR032675 -
Mtr6g2049 1108 Gene3D Ribonuclease Inhibitor 867 962 IPR032675 -
Mtr6g2049 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 668 IPR044974 GO:0006952
Mtr6g2049 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 680 1076 IPR044974 GO:0006952
Mtr6g2049 1108 Gene3D - 1 137 IPR035897 -
Mtr6g2049 1108 SUPERFAMILY L domain-like 515 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2049 Mtr-Chr6 37022026 37042027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2049 726 941 WRKY Transcription Factor Family AT4G12020 32.273 7.69e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2049 - - mtr:MTR_6g078890 2138.23