Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2047 ATGGCCAGCCTTTTAAATTCAAAGAATCTCAATTGTGAGAATGAGAGCATAGAGAAGAGAGAAGATCAAGAAACAATAGAAGATGATGGTGATGATGATGAAAGCTTCATGTATGCAATGCAGATTGCAATTTCTATTGCACTTCCCATGGCACTCCAATGTGCAATTGATCTTGGTGTTTTTGAAGTGTTGCAAAAAGCCGGTAAAGGTGCTCAACTCTCGGCCGACGACATCGTGTCCCGTCTTTCCAACATTAACAATCCAAAAGCTTTCAAAATGTTGGATCGCATTCTTGCTCTTCTTGCCTCTCACTCACTGCTTAATTGTTCAATCATTCCTCATGAACAAAACCACATTAATTCCTTTAAGAGATACTATAGCATGACTCCTGTTGCGAAGTTTTTTGCTCCTAATTCTGATGGTGTTTCATTAGGACCCTTGATTGCCTTGAATACTGATAAGATCTTATTAGCTAGCTGGTCCAAGCTTAAAGTTGCAATTGAGGAAGGAGGTACTCCATTTAACAAGGTTCATGGCACCCATCTCTTTGATTATCCCAGCTTGGACTTGAGGTTCAATCAAATTCTCAATACAGCGATGAGCAATCATACAACTATAGTGATGAAAAAGGTTCTTGAATGCTACAAAGGTTTTAGGGATGTAAAAAGACTTGTGGACGTTGGTGGTGGCCTTGGAATGAACATTAACATGATCACTTCAAAATACACTCATATTCAGGGTATCAATTTCGACTTGCCTCATGTCATACAACATGCTCCTTCCTATCCTGGAGTGGAGCATATTGGTGGAGATATGTTTGAAAGTGTTCCCAATGGTGATACCATTTTTATGAAGTGGATACTTCATGATTGGAGTCAGGAAAATTGCATGAAACTTATGAAGAATTGCTATGATGCTATTCCTGATGATGGAAAGGTGATAGTTTTGGAGGCACTTCTACCTAATATGCCTAAGAATGAAGTGGCTTGGAAATCTCTCTCTCAAATGGATATTCTCATGATGACTCATTGTTCAGAAGGCAAAGAGAGAACTAAACAAGAATTCATGGATATGGCAACTAATGCTGGATTTCGTGGCATCAAATATGAATGTTGCATTTATAATTTTTGGATTATGGAGTTCTTCAAGTAA 1152 0.3845 MASLLNSKNLNCENESIEKREDQETIEDDGDDDESFMYAMQIAISIALPMALQCAIDLGVFEVLQKAGKGAQLSADDIVSRLSNINNPKAFKMLDRILALLASHSLLNCSIIPHEQNHINSFKRYYSMTPVAKFFAPNSDGVSLGPLIALNTDKILLASWSKLKVAIEEGGTPFNKVHGTHLFDYPSLDLRFNQILNTAMSNHTTIVMKKVLECYKGFRDVKRLVDVGGGLGMNINMITSKYTHIQGINFDLPHVIQHAPSYPGVEHIGGDMFESVPNGDTIFMKWILHDWSQENCMKLMKNCYDAIPDDGKVIVLEALLPNMPKNEVAWKSLSQMDILMMTHCSEGKERTKQEFMDMATNAGFRGIKYECCIYNFWIMEFFK* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2047 383 Gene3D Vaccinia Virus protein VP39 137 383 IPR029063 -
Mtr6g2047 383 PANTHER O-METHYLTRANSFERASE 23 383 IPR016461 GO:0008168
Mtr6g2047 383 Pfam Dimerisation domain 50 102 IPR012967 GO:0046983
Mtr6g2047 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 381 IPR029063 -
Mtr6g2047 383 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 40 383 IPR016461 GO:0008168
Mtr6g2047 383 SUPERFAMILY "Winged helix" DNA-binding domain 31 138 IPR036390 -
Mtr6g2047 383 Pfam O-methyltransferase domain 160 365 IPR001077 GO:0008171
Mtr6g2047 383 PIRSF O-mtase 16 383 IPR016461 GO:0008168
Mtr6g2047 383 Gene3D - 15 135 IPR036388 -
Mtr6g2047 383 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 23 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2047 Mtr-Chr6 36998834 37002488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2047 32 383 Monolignol Biosynthesis Gene Families AT5G54160 49.432 2.39e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2047 K13066 - gmx:100803633 507.679