Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2039 ATGCTCCACAGATCACACTCACTCATGGCATCTCTCACAGATCGTTTCAAATATGACCTTTTTCTTAGCTTCAGAGGCGAAGATACTCGCCATGGTTTCACCGGCAATCTTTGGAAAGCACTGAGTGACAGAGGAATTCACACCTTCATGGATGATGAAGAACTTCAAAAAGGCGAAGAAATCACACCATCACTCATCAAAGCTATTGAAGATTCCAACATGGCTATCATCGTTCTTTCCAAGAACTATGCATCTTCAACCTTTTGCTTAAAAGAACTATCCACCATCCTTTATTCGATTAAAGATAAGGGTCGGTGTGTTTGGCCGGTTTTTTATGATGTGGAACCTTCTGATGTGAGAAAGTTGAAAAGGAGTTATGGTGAAGCAATGGTTGAACATGAGGCAAGGGATCATAGTAACATGGATTTGTTGCAGAAATGGAAGAATGCTCTGAACCAAGTTGCTAATTTGTCTGGCTTTCATTTCAAAAATGGGGATGAATATGAACATGTTTTTATTGGGAAGATAGTTGAACAAGTCTCAAGGGAGATTATACCTGCTACTTTACCTGTTCCTGATTATCTAGTTGGACTCGAGTACCAAAAGCAGCATGTAACATCCCTTTTGAATGATGGGCCTAATGATAAAGTCCAAATGGTAGGGATCCATGGGATTGGTGGAATAGGGAAAACTACCCTTGCCCTGGCAGTTTATAATTCCATTGTCCATCAATTTCAAGGTTCCTGTTTTCTTGAAAAAGTTAGAGAAAATTCAGACAAAAATGGGTTGATACATCTCCAAAAGATCCTTCTATCTCAAGTTGTTGGAGAAAAGAACATTGAGTTAACAAGTGTTAGACAAGGAATTTCAATATTACAAAAAAGGTTCCACCAAAAGAAGGTTCTTTTGCTTCTAGACGATGTTGACAAGGAGGAGCAATTAGAGGCTATTGCTGGAAGATCTGATTGGTTTGGTCGTGGCAGTAGAGTCATCATCACCACTCGGGACAAAAGGTTGCTAACATATCATGGGGTTGAACGTACATATGAGGTGAATGGGTTGAATGACCAAGATGCTTTTGAGCTAGTTATCTTGAAAGCTTTTAAAAATAAATTTAGTCCAAGCTATAAGGATGCTTTATTTGCACAGTATGGTAGTCTATTGGATGTGAACAAATTGCCTAGACTGAAAGCTTTTAAGACTGACGAAGTTTTTTCAGGTTATGTGCATGTTATATTACGTGCCATATCATATGCTTCTGGCCTTCCACTGGCTTTGGAAGTCATAGGTTCTCACTTTTTTAATAAGACAATTGAACAATGTAAATATGCATTAGATCGTTATGAAAGGATTCCTGATAAAAAGATCCAAACGATACTACAACTTAGCTTTGATGCTTTGCAGGAAGAAGAGAAGTCTGTTTTTCTTGACATTGCCTGCTGCTTCAAAGGATATAAATGGACAAGGGTAGAACAAATACTTAATGCTCATTATGATAATATCATGAAAGATCACATTGATGTGTTAGTGGAAAAATCTCTCATTAAAACAAGTATGTCTGGTAACGTGACATTACATGATTTGATAGAGGATATGGGGAAAGAAATTGTTAGACAAGAATCACCTGAAGATCCTGGAAAACGCAGTAGGTTATGGTCCTCTAAAGATATAATTCAAGTTTTAGAAGAAAATACGGGAACAAGTAAAATTGAAATCATATGTCCAAGCTCCCGGATTGAAGTAGAATGGGATGAAGAGGCTTTCAAGAAGATGGAAAACCTCAGAACACTAATTATTATGGATGGCCAATTTACTGAGAGTCCCAAAAATCTTCCGAACAGTCTAAGAATACTTGAACATCACCTATATCCTTCATGGGGTTTACCGTCTCAATTTTATCCAAGAAAACTTGCCATATGCAAGATTCCGTCTTACTCTACATCATTCGCGTGGGATGACTTTTTCAAGAAGAAGTTCAAGAATATAAGGGTTTTAAGTTTTGATCACCACAAATCTTTAACACGGATACCTGACATATCTGGTCTCGTAAATTTAGAAGAACTTTCTTTTCAAGATTGTGTGAATTTAATCACAGTCGATGACTCCGTTGGGTTTCTGGGTAATCTTAAAACCTTAAGAGCTATGCGTTGCATCAAGCTCAGGAGTATTCCGCCTCTCAAGTTGGCTTCTCTGGAAGAACTCGATCTTTCACAGTGTTCTTGTCTTGAGAGTTTTCCACCTGTGGTAGATGGGTTGGTGGATAAACTTAAAACCATGACTGTTAGAAGTTGCGTCAAGTTAAGGAGTATTCCAACTCTTAAGTTGACTTCGTTAGAAGAACTCGATCTTTCAAATTGTTTTAGTCTCGAGAGTTTTCCACTTGTGGTGGATGGGTTTCTTGGAAAACTTAAAATCCTACTTGTTAAATATTGTCGCAATCTCAGGAGTATTCCACCTCTCAGGTTGGATTCATTAGAAAAGCTTGACCTTTCACATTGTTATAGTCTCGAGAGTTTTCCAACTGTGGTGGATGGGTTGTTGGATAAACTTAAATTCTTGAGTATGGAACATTGCGTCAAGCTTACGAGTATCCCATCGCTCAGGTTGACCTCATTGGAACGGTTCAATCTTTCACATTGTCTGAGCCTAGAGAGATTTCCAAAAATATTGGGAGAGATGAATAATATAACAGAAATTCACTTGGATAATACTCTCATACAAGAATTGCCGTTTCCATTTCAAAATCTTACTCCGCCTCAAACATTATATCAATGTAACTGTGGAGTTGTTTATTTATCGAATAGAGCTGCTGTGATGTCAAAACTGGCTGAATTTACCATCCAGGCTGAAGAAAAAGTGAGCCCAATGCAATCTTCACATGTAGAATATATTTGTCTGAGGAACTGCAAATTTTCAGATGAATATTTGTCAACGGGTCTCATGTTGTTTACTAATGTGAAAGAATTACACCTAAGTGATAACCAATTCAAAATTCTTCCAAAATCTATCGAAAAATGTCATTTTTTACAGAGGCTTGTCCTGGATAACTGTGAGGAACTTCAGGAAATTGAAGGGATTCCACCATGCTTAAAAACATTATCTGCATTAAACTGCAAATCATTGACCTCACCGTGCAAAAGCAAATTACTAAATCAGGAATTACATGAGGCAGGAAACACTTGGTTCCGTTTGCCACGAACAAGGATTCCAGAGTGGTTCGACCATCAATGCTTGGCAGGATTGTCTATTTCTTTCTGGTTCAGGAACAAGTTTCCTGTCATAGCTCTCTGTGTTGTTTCTCCATCGACATGGGATGATTCTAGGCGTCCTGTAAGAGTGATCATCAATGGTGATACATTTTTCTATAGGCATGGTGAAAATAAACGTTTATCACCAGAAGTGTATCATCTACATCTTTTTCATATGCAAATGGAAAAATTGAATAATAATATGGACAAAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTGACTTTGGGTTCCCATTCATGTATAGTGGAATCCATGTATTGAAAAAGAAAAGTAACATGAAGGATATTCAATTCACCAACCCAGATAAAGATGATAATATTGAGCTCACTCAATATAAACGAAACTCTGATTCATTGGTCTCAGTCATTGCTTCTGATGTGGATAAATGTGAATGA 3672 0.3764 MLHRSHSLMASLTDRFKYDLFLSFRGEDTRHGFTGNLWKALSDRGIHTFMDDEELQKGEEITPSLIKAIEDSNMAIIVLSKNYASSTFCLKELSTILYSIKDKGRCVWPVFYDVEPSDVRKLKRSYGEAMVEHEARDHSNMDLLQKWKNALNQVANLSGFHFKNGDEYEHVFIGKIVEQVSREIIPATLPVPDYLVGLEYQKQHVTSLLNDGPNDKVQMVGIHGIGGIGKTTLALAVYNSIVHQFQGSCFLEKVRENSDKNGLIHLQKILLSQVVGEKNIELTSVRQGISILQKRFHQKKVLLLLDDVDKEEQLEAIAGRSDWFGRGSRVIITTRDKRLLTYHGVERTYEVNGLNDQDAFELVILKAFKNKFSPSYKDALFAQYGSLLDVNKLPRLKAFKTDEVFSGYVHVILRAISYASGLPLALEVIGSHFFNKTIEQCKYALDRYERIPDKKIQTILQLSFDALQEEEKSVFLDIACCFKGYKWTRVEQILNAHYDNIMKDHIDVLVEKSLIKTSMSGNVTLHDLIEDMGKEIVRQESPEDPGKRSRLWSSKDIIQVLEENTGTSKIEIICPSSRIEVEWDEEAFKKMENLRTLIIMDGQFTESPKNLPNSLRILEHHLYPSWGLPSQFYPRKLAICKIPSYSTSFAWDDFFKKKFKNIRVLSFDHHKSLTRIPDISGLVNLEELSFQDCVNLITVDDSVGFLGNLKTLRAMRCIKLRSIPPLKLASLEELDLSQCSCLESFPPVVDGLVDKLKTMTVRSCVKLRSIPTLKLTSLEELDLSNCFSLESFPLVVDGFLGKLKILLVKYCRNLRSIPPLRLDSLEKLDLSHCYSLESFPTVVDGLLDKLKFLSMEHCVKLTSIPSLRLTSLERFNLSHCLSLERFPKILGEMNNITEIHLDNTLIQELPFPFQNLTPPQTLYQCNCGVVYLSNRAAVMSKLAEFTIQAEEKVSPMQSSHVEYICLRNCKFSDEYLSTGLMLFTNVKELHLSDNQFKILPKSIEKCHFLQRLVLDNCEELQEIEGIPPCLKTLSALNCKSLTSPCKSKLLNQELHEAGNTWFRLPRTRIPEWFDHQCLAGLSISFWFRNKFPVIALCVVSPSTWDDSRRPVRVIINGDTFFYRHGENKRLSPEVYHLHLFHMQMEKLNNNMDKALLENKWNHAEVDFGFPFMYSGIHVLKKKSNMKDIQFTNPDKDDNIELTQYKRNSDSLVSVIASDVDKCE* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2039 1223 Pfam TIR domain 17 182 IPR000157 GO:0007165
Mtr6g2039 1223 Gene3D - 182 346 IPR027417 -
Mtr6g2039 1223 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 755 1168 IPR044974 GO:0006952
Mtr6g2039 1223 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 837 IPR044974 GO:0006952
Mtr6g2039 1223 Gene3D Ribonuclease Inhibitor 797 945 IPR032675 -
Mtr6g2039 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 379 IPR027417 -
Mtr6g2039 1223 Gene3D - 12 181 IPR035897 -
Mtr6g2039 1223 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 160 IPR035897 -
Mtr6g2039 1223 Gene3D - 401 468 IPR042197 -
Mtr6g2039 1223 Gene3D Ribonuclease Inhibitor 946 1056 IPR032675 -
Mtr6g2039 1223 PANTHER ARCHAEAL ATPASE 755 1168 - -
Mtr6g2039 1223 PANTHER ARCHAEAL ATPASE 28 837 - -
Mtr6g2039 1223 PRINTS Disease resistance protein signature 219 234 - -
Mtr6g2039 1223 PRINTS Disease resistance protein signature 295 309 - -
Mtr6g2039 1223 PRINTS Disease resistance protein signature 419 433 - -
Mtr6g2039 1223 PRINTS Disease resistance protein signature 726 742 - -
Mtr6g2039 1223 Gene3D Ribonuclease Inhibitor 567 796 IPR032675 -
Mtr6g2039 1223 SUPERFAMILY "Winged helix" DNA-binding domain 454 562 IPR036390 -
Mtr6g2039 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 478 IPR027417 -
Mtr6g2039 1223 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Mtr6g2039 1223 SMART till_3 17 157 IPR000157 GO:0007165
Mtr6g2039 1223 Pfam NB-ARC domain 199 454 IPR002182 GO:0043531
Mtr6g2039 1223 SUPERFAMILY L domain-like 822 1041 - -
Mtr6g2039 1223 SUPERFAMILY L domain-like 542 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2039 Mtr-Chr6 36820906 36826352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2039 18 840 WRKY Transcription Factor Family AT4G12020 26.706 4.23e-62 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2039 - - cam:101511404 1655.57