Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g2013 ATGGCTCCAACAAATCCCATCAAAAAATTTCTTAAGAAATTTTCATGTCTAGGCAAGAAAACACAAGTTAACAATGATCGTCAATGCCTTGATTCAGATATTTCCCAAGGCTACATTGCTGTGTATGTTGGAGAAAACAGAATCAAATATGTTATTCCAATTTCTTTTCTACATCAACCAGTGTTTCAAAACCTTCTCCGTCAAGCTGAAGAAGAGTTTGGTTTTGATCATGATCGTAAGGGTCTCACTCTTCCTTGCCGCCAAGATGTTTTTGAGTCCATTGTTTCTAGTTTGGATAGATGA 303 0.3663 MAPTNPIKKFLKKFSCLGKKTQVNNDRQCLDSDISQGYIAVYVGENRIKYVIPISFLHQPVFQNLLRQAEEEFGFDHDRKGLTLPCRQDVFESIVSSLDR* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g2013 100 Pfam Auxin responsive protein 24 98 IPR003676 GO:0009733
Mtr6g2013 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 97 IPR003676 GO:0009733
Mtr6g2013 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 4 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g2013 Mtr-Chr6 36584932 36585234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g2013 7 100 Calmodulin-binding Proteins AT4G34750 37.234 4.21e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g2013 K14488 - rcu:107261168 109.768