Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1994 ATGATACCTACGTACCTTGTGTCTTACGTAACCACCGAAGGTTTTGCAAACATGAATGGAAAAGCTTCTGTTTCTAAAGAGCTTCATGCTAAACATACCAAGATCTTAGAAGGACTTCTTAAGCTACCTGACAACAGGGAATGTGCAGACTGTTGGACTAAGGCACCAAGATGGGCTAGTGTGAACTTAGGAATTTTCATTTGTATGCAATGTTCCGGGATTCATCGGAGTCTTGGAGTGCATATATCAAAGGTGAGGTCTACAACTTTGGATACATGGTTGCCAGATCAAGTTTCTTACATGCAATTTATGGGCAACGTGAAGTCAAATAAGCACTGGGAAGCTAAACTACCACCAAATTTTGACAGAAATGCATACGGAATCGAGAAGTTTATCCGTGCCAAGTATGTCGAGAAAAAGTGGGCTTTACAAGGTGAGCTACAATCAGCTTCAAAGTCAGCTGATATGATGTTTGAGTTCAAAGATTTACCAGCTGATGGGGTCAAGAGTGGTATTAACAGAAACAGAAGATTGTCGCTTGAGGAAAGCATTCTAGTGAATCATATGGCACAAGTTCGGCCTCCAATAGCAAGATCTCATGAGGCTCCTGTAAATTTACAAGTGAAGATTAAACCACCAATAAAGAGGCCATCAGCATCGGTTGATTTTGATAAGCCCGTTGGAAATAGCAAAAGTGCCGTTGATCTTTTTAGCATGCTTTCCACTGATGCCGATAAAACGAATATCTCAACTACACCTCCTAGCTGGACAACGTTTGATTGA 783 0.4112 MIPTYLVSYVTTEGFANMNGKASVSKELHAKHTKILEGLLKLPDNRECADCWTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSYMQFMGNVKSNKHWEAKLPPNFDRNAYGIEKFIRAKYVEKKWALQGELQSASKSADMMFEFKDLPADGVKSGINRNRRLSLEESILVNHMAQVRPPIARSHEAPVNLQVKIKPPIKRPSASVDFDKPVGNSKSAVDLFSMLSTDADKTNISTTPPSWTTFD* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1994 260 Pfam Putative GTPase activating protein for Arf 34 143 IPR001164 GO:0005096
Mtr6g1994 260 CDD ArfGap 36 136 - -
Mtr6g1994 260 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 18 260 IPR044520 GO:0005096
Mtr6g1994 260 SUPERFAMILY ArfGap/RecO-like zinc finger 32 143 IPR037278 -
Mtr6g1994 260 PRINTS HIV Rev interacting protein signature 45 64 IPR001164 GO:0005096
Mtr6g1994 260 PRINTS HIV Rev interacting protein signature 64 81 IPR001164 GO:0005096
Mtr6g1994 260 PRINTS HIV Rev interacting protein signature 85 106 IPR001164 GO:0005096
Mtr6g1994 260 ProSiteProfiles ARF GTPase-activating proteins domain profile. 33 150 IPR001164 GO:0005096
Mtr6g1994 260 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 18 260 - -
Mtr6g1994 260 SMART arf_gap_3 22 150 IPR001164 GO:0005096
Mtr6g1994 260 Gene3D Arf GTPase activating protein 15 148 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1994 Mtr-Chr6 36389705 36393924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1994 39 136 C2H2 Transcription Factor Family AT4G05330 51.923 5.49e-29 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1994 6 36389705 36393924 Mtr6g1994 6 36389705 36393924 ECH