Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1987 ATGCGGATAATCAATGAGCTCACTGCTGTAGCTATTTCATATGGCCTCGACAAGAGAGCTGAGTGTGCTGGAGAACGAAATACTTTCATCTTCGACCTGGGTAGTGGGACTTTTGATGTTTCTCTCCTTACAATTCAGGATAAGGTCTTCCAAGTTAAGGCCACCGCTGGAAACACTCACCTCGGGGTCGAGGACATTGATAATAGGATGGTGAACTACCTCAGATTGTCGTCCAAAGAAATTCAAGAAATGATCAAAGAAGCTGAGAATTACCATGTAGAAGATGAAAAATTTCTAAGAAAGGCCAATGTAATGAATGCATTACATTATTGTGTTTACAAGATGAAGAATGATTTAAACAAGAAGGATACTAATCTAAAGCTCTCCTCTCAAGAAAATGACAAGATTAACTCTGCAATTAAAAAGGACACAAATTTGCTTGAAATTAGTAACCAGCAGAGTGAAATAGATATTCTTGAAAATCATCTGAAGGATCTTGAAAGTATTGTTGCTTGCATATCAGTATTTGATTTCAGTTTTCCTTCAACAATCTCAAAATGA 561 0.369 MRIINELTAVAISYGLDKRAECAGERNTFIFDLGSGTFDVSLLTIQDKVFQVKATAGNTHLGVEDIDNRMVNYLRLSSKEIQEMIKEAENYHVEDEKFLRKANVMNALHYCVYKMKNDLNKKDTNLKLSSQENDKINSAIKKDTNLLEISNQQSEIDILENHLKDLESIVACISVFDFSFPSTISK* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1987 186 Pfam Hsp70 protein 76 171 IPR013126 GO:0005524|GO:0140662
Mtr6g1987 186 Pfam Hsp70 protein 1 75 IPR013126 GO:0005524|GO:0140662
Mtr6g1987 186 PANTHER HEAT SHOCK 70 KDA PROTEIN 75 172 - -
Mtr6g1987 186 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 74 - -
Mtr6g1987 186 Gene3D - 22 101 - -
Mtr6g1987 186 Gene3D - 102 175 IPR029048 -
Mtr6g1987 186 SUPERFAMILY Actin-like ATPase domain 24 90 IPR043129 -
Mtr6g1987 186 ProSitePatterns Heat shock hsp70 proteins family signature 2. 30 43 IPR018181 -
Mtr6g1987 186 Coils Coil 149 169 - -
Mtr6g1987 186 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 105 173 IPR029048 -
Mtr6g1987 186 PANTHER HEAT SHOCK PROTEIN 70KDA 75 172 IPR013126 GO:0005524|GO:0140662
Mtr6g1987 186 PANTHER HEAT SHOCK PROTEIN 70KDA 1 74 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1987 Mtr-Chr6 36250712 36251272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1987 1 81 Calmodulin-binding Proteins AT5G02500 66.279 4.36e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1987 K03283 - mtr:MTR_6g478100 359.377