Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1986 ATGGAAGACAGGCATGGATCTGAATACATGTTTATTAATAAGATTGTTAGAGACGTCTCAAGAGTGATCCAACCTTTTTCCTTATCTATTCCTGATTACATAGTTGGGTTGGAGGACCAAATACAAGATGTATTACGGCTTTTGAATGTTGGGTCTGTTGATAAAGTCTATATGGTCGGAATCCACGGAACTGGTGGAATAGGGAAAACAACTCTTTCTCTTGCAGTTTATAATTCAATTGTCGATCAATTTGATGGTTCTTGTTATCTTGAAGATGTAAGAGGAAATAAAGAGAAACATGGGTTGATACATCTCCAAAATATCCTTCTTTCTAAAATATTTGGAGAAAATAAAATTGCGGTAACAAGCGTTAACGAGGGAATTAAAGAACTTCGAGTTAGGCTCAAACAGAAGAAGGTTCTTTTGCTTCTTGACAATGTTGACAAGTTGGATCAATTACGCGCTATTGTTGGAGAACCCGAATGGTTTGGTAATGGAAGTAGAGTTATCATCACGACCCGTGACACACAAGTGCTAAAAAGTCATGGGGTTGAAAAAACACATGAAGTGAAACTGTTGTTGAGGGATGAAGCTTACGATTTTCTTAGATGGAAAACTTTTGGAACTAACGAAGTTAGTCCAAGCTTTGAAGATGTTTTCAATCGTGCTTTAAACTATACAAGTCGCCTTCCATTAGCTATTGAAATAATCGGTTCTCACTTATTTTCAAAAAAAACAACAGAACAATGGATATCTGCGCTAGATCGGTACGAAAAGATTCCTAAGCAAGAGATCTTTGAGATTCTTAAAGTGAGCTTCGATGATTTGGTCCAAGAAGAGAAAGATGTTTTTCTTGACATAGCTTGTTTTTTCAAAGGAGAACAATTGGAAGATGTCGAAATAATACTTCATGCTCATTATGGTGACGAAAAGAAAGATCACATCAATGTGTTAATTGAAAAATCTCTCATAAAGATAAGCCAGCCTAATTTTTTGACATTACATGATCTGATAGAAGATATGGGAAAAGAAATTGTCAGACTAGAATCACCAGATCAGCCTGGAGAACGCAGTAGATTATGGTCTGCTAAAGACATAGCTGAAGTTTTAGAAGAAAATACGGGAACAAGTAAAATTGGAATGATGATGTGTTCGGATTCCGATGAAGACATTGTAGTAAATTGGGATGGAGAGGCATTTAAGAATATGACAAAGCTTAGAACACTTTTTATTCAAAGTGTTTATTTTTCTGAAAGTCCAAAGCATCTTCCAAATAGTTTAAGAGTACTGCGCTTGTGGGAATATCCATCAGAAGAGTGTTTACCGGTTGATTTTTACCCGAGGCAACTCACATTATGCAAATTGAACTTTACATTTAATCGTCCACAGGAAGTCTTTTTCAAGAAGGCAAGTGTGATGAATTTATATCCCCCGTCTTATATTTATATTAGAAAATGCTAA 1461 0.3573 MEDRHGSEYMFINKIVRDVSRVIQPFSLSIPDYIVGLEDQIQDVLRLLNVGSVDKVYMVGIHGTGGIGKTTLSLAVYNSIVDQFDGSCYLEDVRGNKEKHGLIHLQNILLSKIFGENKIAVTSVNEGIKELRVRLKQKKVLLLLDNVDKLDQLRAIVGEPEWFGNGSRVIITTRDTQVLKSHGVEKTHEVKLLLRDEAYDFLRWKTFGTNEVSPSFEDVFNRALNYTSRLPLAIEIIGSHLFSKKTTEQWISALDRYEKIPKQEIFEILKVSFDDLVQEEKDVFLDIACFFKGEQLEDVEIILHAHYGDEKKDHINVLIEKSLIKISQPNFLTLHDLIEDMGKEIVRLESPDQPGERSRLWSAKDIAEVLEENTGTSKIGMMMCSDSDEDIVVNWDGEAFKNMTKLRTLFIQSVYFSESPKHLPNSLRVLRLWEYPSEECLPVDFYPRQLTLCKLNFTFNRPQEVFFKKASVMNLYPPSYIYIRKC* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1986 486 PANTHER ARCHAEAL ATPASE 6 455 - -
Mtr6g1986 486 PRINTS Disease resistance protein signature 58 73 - -
Mtr6g1986 486 PRINTS Disease resistance protein signature 134 148 - -
Mtr6g1986 486 PRINTS Disease resistance protein signature 227 241 - -
Mtr6g1986 486 Gene3D - 193 277 IPR042197 -
Mtr6g1986 486 Pfam NB-ARC domain 41 259 IPR002182 GO:0043531
Mtr6g1986 486 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 455 IPR044974 GO:0006952
Mtr6g1986 486 SUPERFAMILY "Winged helix" DNA-binding domain 264 371 IPR036390 -
Mtr6g1986 486 Gene3D - 23 191 IPR027417 -
Mtr6g1986 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 287 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1986 Mtr-Chr6 36239779 36243788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1986 35 461 WRKY Transcription Factor Family AT5G45050 30.617 8.15e-47 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1986 - - mtr:MTR_0573s0030 865.529